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Quantitative proteome profiling to identify biomarkers and therapeutic targets for adult T-cell leukemia (ATL).

Research Project

Project/Area Number 23701090
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Tumor diagnosis
Research InstitutionThe Institute of Physical and Chemical Research

Principal Investigator

ISHIHARA Makoto  独立行政法人理化学研究所, バイオマーカー探索・開発チーム, 特別研究員 (60581189)

Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2012: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2011: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Keywordsプロテオミクス / 質量分析 / ATL / HTLV-1 / 機械学習 / 診断マーカー / 治療標的 / プロテオミクス解析
Research Abstract

ATL is one of the most aggressive hematologic malignancies caused by human T-lymphotropic virus type 1 (HTLV-1) infection. The prognosis of ATL is extremely poor; however, effective strategies for diagnosis and treatment have not been established. 2-step statistical analysis for 14,064 peptides detected through focused proteomic profiling of the HTLV-1 enriched CD4^+CD25^+CCR4^+ T-cell subpopulation on 29 clinical cases were performed. 91 peptide determinants that statistically classified 4 clinical groups with an accuracy rate of 92.2% by cross-validation test were extracted, resulting in the identification of 17 classifier proteins which were potential diagnostic biomarkers and an attractive resource of therapeutic targets for ATL.

Report

(3 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Research-status Report
  • Research Products

    (13 results)

All 2013 2012 2011

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (8 results) Patent(Industrial Property Rights) (2 results)

  • [Journal Article] Preapoptotic protease calpain-2 is frequently suppressed in adult T-cell leukemia2013

    • Author(s)
      Sato, Ayako Tatsuguchi, Naomi Saichi1, Atae Utsunomiya, Yusuke Nakamura, Hidewaki Nakagawa, Yoshihisa Yamano, and Koji Ueda
    • Journal Title

      Blood

      Volume: vol. 121 no. 21 Pages: 4340-4347

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Preapoptotic protease calpain-2 is frequently suppressed in adult T-cell leukemia2013

    • Author(s)
      Ishihara M., Araya N., Sato T., et al.
    • Journal Title

      Blood

      Volume: in press Issue: 21 Pages: 4340-7

    • DOI

      10.1182/blood-2012-08-446922

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Plasmin inhibitor reduces lymphoid tumor growth by suppressing matrixmetallproteinase-9 dependent CD11b+/F4/80+ myeloid cell recruitment2012

    • Author(s)
      Ishihara M, Heissig B, Nishida C, Rosenkvist J, Tashiro Y, Ohki M, Wanaka K, Tsuda Y, Okada Y, Nakauchi H, Hattori K
    • Journal Title

      Leukemia

      Volume: 26 Issue: 2 Pages: 332-339

    • DOI

      10.1038/leu.2011.203

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Presentation] Quantitative proteome profiling to identify biomarkers for Human T-lymphotropic virus type-1 associated disease2012

    • Author(s)
      Makoto Ishihara
    • Organizer
      第71回日本癌学会学術総会
    • Place of Presentation
      ロイトン札幌(北海道札幌市)
    • Related Report
      2012 Final Research Report
  • [Presentation] Quantitative proteome profiling of cerebrospinal fluid to identify potential diagnostic markers for human T-cell leukemia virus type 1 associated myelopathy2012

    • Author(s)
      Makoto Ishihara
    • Organizer
      HUPO 11th Annual World Congress
    • Place of Presentation
      Hynes Convention Center (Boston, Massachusetts, USA)
    • Related Report
      2012 Final Research Report
  • [Presentation] Quantitative proteome profiling of CD4^+CD25^+CCR4^+ T-cells to identify potential therapeutic targets for adult T-cell leukemia (ATL) and Human T-lymphotropic virus type-1 associated myelopathy (HAM)2012

    • Author(s)
      Makoto Ishihara
    • Organizer
      AACR 2012 Annual Meeting
    • Place of Presentation
      McCormick Place (Chicago, Illinois, USA)
    • Related Report
      2012 Final Research Report
  • [Presentation] Quantitative proteome profiling to identify biomarkers for Human T-lymphotropic virus type-1 associated disease.2012

    • Author(s)
      Makoto Ishihara
    • Organizer
      第71回日本癌学会学術総会
    • Place of Presentation
      ロイトン札幌(北海道札幌市)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Quantitative proteome profiling of CD4+CD25+CCR4+ T-cells to identify potential therapeutic targets for adult T-cell leukemia (ATL) and Human T-lymphotropic virus type-1 associated myelopathy (HAM).2012

    • Author(s)
      Makoto Ishihara
    • Organizer
      AACR 2012 Annual Meeting
    • Place of Presentation
      McCormick Place (Chicago, Illinois, USA)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Quantitative proteome profiling of cerebrospinal fluid to identify potential diagnostic markers for human T-cell leukemia virus type 1 associated myelopathy.2012

    • Author(s)
      Makoto Ishihara
    • Organizer
      HUPO 11th Annual World Congress
    • Place of Presentation
      Hynes Convention Center (Boston, Massachusetts, USA)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 成人T細胞白血病ウイルス関連疾患における新規マーカー同定を目的とした定量プロテオームプロファイリング2011

    • Author(s)
      石原誠人
    • Organizer
      第70回日本癌学会学術総会
    • Place of Presentation
      名古屋国際会議場
    • Related Report
      2011 Research-status Report
  • [Presentation] QUANTITATIVE PROTEOME PROFILING OF CD4+CD25+CCR4+ T-CELLS TO IDENTIFY POTENTIAL THERAPEUTIC TARGETS FOR HUMAN T-LYMPHOTROPIC VIRUS TYPE-1 ASSOCIATED MYELOPATHY (HAM) AND ADULT T-CELL LEUKEMIA2011

    • Author(s)
      Makoto Ishihara
    • Organizer
      10th HUPO World Congress
    • Place of Presentation
      Geneva palexp, Switzerland
    • Related Report
      2011 Research-status Report
  • [Patent(Industrial Property Rights)] ヒトTリンパ球向性ウイルスI型関連疾患検出用のポリペプチド、およびその利用2012

    • Inventor(s)
      植田幸嗣、石原誠人、山野嘉久
    • Industrial Property Rights Holder
      植田幸嗣、石原誠人、山野嘉久
    • Filing Date
      2012-08-29
    • Related Report
      2012 Final Research Report
  • [Patent(Industrial Property Rights)] ヒトTリンパ球向性ウイルスI型関連疾患検出用のポリペプチド、およびその利用2012

    • Inventor(s)
      植田幸嗣、石原誠人、山野嘉久
    • Industrial Property Rights Holder
      植田幸嗣、石原誠人、山野嘉久
    • Industrial Property Rights Type
      特許
    • Filing Date
      2012-08-29
    • Related Report
      2012 Annual Research Report

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Published: 2011-08-05   Modified: 2019-07-29  

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