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Regulation of nuclear architecture of neuronal cells by nuclear matrix protein SP120

Research Project

Project/Area Number 23710216
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Genome biology
Research InstitutionOkayama University

Principal Investigator

MIYAJI Mari  岡山大学, 大学院・医歯薬学総合研究科, 助教 (50349255)

Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2012: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2011: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords神経細胞 / 核内構造 / AT-rich DNA / 核マトリクス / repeat配列 / エピゲノム / 遺伝子発現制御 / ゲノム環境 / 核構造 / 終末分化 / 反復配列 / 核マトリックス
Research Abstract

Several neuron-specific genes placed in the AT-rich genomic environment are regulated by DNA topoisomerase (topo) IIβ. We have identified hnRNP U/SAF-A/SP120 as a protein associated with topo IIβ in differentiating cerebellar neurons. SP120 is a multifunctional nuclear protein that directly binds to DNA and RNA. SP120 specifically and cooperatively binds AT-rich matrix attachment regions (MAR). It was the reported that the N-terminal domain termed SAF-box was required for DNA binding and the C-terminal domain called RGG-box was essential for the interaction with RNA. We showed that a C-terminal domain enriched with Arg-Gly (RG domain) encompassing the RGG-box was important for the MAR-specific binding activity.

Report

(3 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Research-status Report
  • Research Products

    (27 results)

All 2012 2011 Other

All Journal Article (2 results) (of which Peer Reviewed: 2 results) Presentation (22 results) (of which Invited: 1 results) Remarks (3 results)

  • [Journal Article] Tgm2/Gh, Gbx1 and TGF-beta are involved in retinoic acid-induced transdifferentiation from epidermis to mucosal epithelium.2011

    • Author(s)
      Akiko Obinata, Keitarou Osakabe, Mari Yamaguchi, Riyo Morimoto, Yoshihiro Akimoto
    • Journal Title

      he international journal of developmental biology

      Volume: 55巻 Pages: 933-943

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Tgm2/Gh, Gbx1 and TGF-beta are involved in retinoic acid-induced transdifferentiation from epidermis to mucosal epithelium.2011

    • Author(s)
      Akiko Obinata
    • Journal Title

      International journal of developmental biology

      Volume: 55 Issue: 10-11-12 Pages: 933-943

    • DOI

      10.1387/ijdb.113326ao

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Presentation] II 型トポイソメラーゼによる核内構造変化と遺伝子発現制御2012

    • Author(s)
      宮地 まり
    • Organizer
      染色体ワークショップ/核ダイナミクス研究会
    • Place of Presentation
      淡路島市
    • Year and Date
      2012-12-21
    • Related Report
      2012 Final Research Report
  • [Presentation] DNAトポイソメラーゼIIβによる遠隔ゲノム部位間の相互作用2012

    • Author(s)
      古田良平
    • Organizer
      日本分子生物学会
    • Place of Presentation
      横浜市
    • Year and Date
      2012-12-15
    • Related Report
      2012 Final Research Report
  • [Presentation] SP120/SAF-A/hnRNP UのMAR認識機構とDNA構造変化2012

    • Author(s)
      宮地 まり
    • Organizer
      日本分子生物学会
    • Place of Presentation
      福岡市
    • Year and Date
      2012-12-11
    • Related Report
      2012 Annual Research Report 2012 Final Research Report
  • [Presentation] DNAトポイソメラーゼIIbetaによる遠隔ゲノム部位間の相互作用と遺伝子発現制御2012

    • Author(s)
      古田良平
    • Organizer
      日本分子生物学会
    • Place of Presentation
      福岡市
    • Year and Date
      2012-12-11
    • Related Report
      2012 Final Research Report
  • [Presentation] Induced Expression of Neuronal Genes in Terminal Differentiation: Essential Roles of DNA Topoisomerase Iibeta2012

    • Author(s)
      Kimiko M. Tsutsui
    • Organizer
      BIT
    • Place of Presentation
      Beijing, China
    • Year and Date
      2012-05-20
    • Related Report
      2012 Final Research Report
  • [Presentation] II型トポイソメラーゼによる遠隔ゲノム部位間の相互作用2012

    • Author(s)
      古田良平
    • Organizer
      染色体ワークショップ/核ダイナミクス研究会
    • Place of Presentation
      淡路島市
    • Related Report
      2012 Final Research Report
  • [Presentation] RG-domain of hnRNP U/SAF-A/SP120 is essential for its MAR-specific DNA-binding activity2012

    • Author(s)
      Mari Miyaji
    • Organizer
      BIT
    • Place of Presentation
      Beijing, China
    • Related Report
      2012 Annual Research Report 2012 Final Research Report
  • [Presentation] DNA Topoisomerase IIβ Mediates Distal Genomic Interactions in Terminal Differentiation of Neurons2012

    • Author(s)
      yohei Furuta
    • Organizer
      BIT
    • Place of Presentation
      Beijing, China
    • Related Report
      2012 Final Research Report
  • [Presentation] DNA Topoisomerase IIbeta Mediates Distal Genomic Interactions in Terminal Differentiation of Neurons2012

    • Author(s)
      Ryohei Furuta
    • Organizer
      BIT
    • Place of Presentation
      Beijing, China
    • Related Report
      2012 Annual Research Report
  • [Presentation] II型トポイソメラーゼによる遠隔ゲノム部位間の相互作用2012

    • Author(s)
      古田 良平
    • Organizer
      染色体ワークショップ/核ダイナミクス研究会
    • Place of Presentation
      淡路島市
    • Related Report
      2012 Annual Research Report
  • [Presentation] 核マトリックスタンパク質SP120/SAF-A/hnRNP Uの新たなMAR特異的DNA結合領域の同定2011

    • Author(s)
      宮地 まり
    • Organizer
      日本分子生物学会
    • Place of Presentation
      横浜市
    • Year and Date
      2011-12-15
    • Related Report
      2012 Final Research Report
  • [Presentation] トポイソメラーゼIIβは離れたゲノム部位の間ではたらくか2011

    • Author(s)
      古田良平
    • Organizer
      核ダイナミクス研究会
    • Place of Presentation
      広島市
    • Year and Date
      2011-10-27
    • Related Report
      2012 Final Research Report
  • [Presentation] Transcriptional Induction of Neuronal Genes by Targeted Action of DNA Topoisomerase Iiβ2011

    • Author(s)
      Kimiko M. Tsutsui
    • Organizer
      dvances in DNA Topoisomerase and Chromosome Dynamics
    • Place of Presentation
      Taipei, Taiwan
    • Year and Date
      2011-10-14
    • Related Report
      2012 Final Research Report
  • [Presentation] Regulatory roles of DNA topoisomerase IIβ in the developing cerebellar neurons2011

    • Author(s)
      Kimiko M. Tsutsui
    • Organizer
      Fourth International Congress of the Society for Research on the Cerebellum
    • Place of Presentation
      文京区
    • Year and Date
      2011-09-18
    • Related Report
      2012 Final Research Report
  • [Presentation] Regulatory roles of DNA topoisomerase IIβ in the developing cerebellar neurons2011

    • Author(s)
      Kimiko M. Tsutsui
    • Organizer
      Fourth International Congress of the Society for Research on the Cerebellum
    • Place of Presentation
      東京大学山上会館(東京都)
    • Related Report
      2011 Research-status Report
  • [Presentation] Transcriptional Induction of Neuronal Genes by Targeted Action of DNA Topoisomerase IIβ2011

    • Author(s)
      Kimiko M. Tsutsui
    • Organizer
      Advances in DNA Topoisomerase and Chromosome Dynamics
    • Place of Presentation
      Academia Sinica (Taipei)
    • Related Report
      2011 Research-status Report
  • [Presentation] トポイソメラーゼIIβは離れたゲノム部位の間ではたらくか2011

    • Author(s)
      古田良平
    • Organizer
      第10回 細胞核ダイナミクス研究会
    • Place of Presentation
      北広島、北海道
    • Related Report
      2011 Research-status Report
  • [Presentation] 核マトリックスタンパク質SP120/SAF-A/hnRNP Uの新たなMAR特異的DNA結合領域の同定2011

    • Author(s)
      宮地まり
    • Organizer
      第34回 日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(横浜市)
    • Related Report
      2011 Research-status Report
  • [Presentation] DNAトポイソメラーゼIIβによる遠隔ゲノム部位間の相互作用2011

    • Author(s)
      古田良平
    • Organizer
      第34回 日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(横浜市)
    • Related Report
      2011 Research-status Report
  • [Presentation] Induced Expression of Neuronal Genes in Terminal Differentiation: Essential Roles of DNA Topoisomerase IIbeta

    • Author(s)
      Kimiko M. Tsustui
    • Organizer
      BIT
    • Place of Presentation
      Beijing, China
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] DNAトポイソメラーゼIIbetaによる遠隔ゲノム部位間の相互作用と遺伝子発現制御

    • Author(s)
      古田 良平
    • Organizer
      日本分子生物学会
    • Place of Presentation
      福岡市
    • Related Report
      2012 Annual Research Report
  • [Presentation] II 型トポイソメラーゼによる核内構造変化と遺伝子発現制御

    • Author(s)
      宮地 まり
    • Organizer
      染色体ワークショップ/核ダイナミクス研究会
    • Place of Presentation
      淡路島市
    • Related Report
      2012 Annual Research Report
  • [Remarks]

    • URL

      http://nbgp.med.okayama-u.ac.jp/

    • Related Report
      2012 Final Research Report
  • [Remarks] 筒井研究室 - 岡山大学

    • URL

      http://nbgp.med.okayama-u.ac.jp/

    • Related Report
      2012 Annual Research Report
  • [Remarks]

    • URL

      http://nbgp.med.okayama-u.ac.jp/

    • Related Report
      2011 Research-status Report

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Published: 2011-08-05   Modified: 2019-07-29  

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