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Development of enzyme free sensitive gene detection system based ontemplate-directed formation of luminescent lanthanide complexe

Research Project

Project/Area Number 23750090
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Analytical chemistry
Research InstitutionKumamoto University

Principal Investigator

KITAMURA Yusuke  熊本大学, 大学院・自然科学研究科, 助教 (80433019)

Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2012: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2011: ¥3,380,000 (Direct Cost: ¥2,600,000、Indirect Cost: ¥780,000)
Keywords生体分析 / 核酸プローブ / 遺伝子解析 / 希土類金属錯体 / SNPs / 核酸 / バイオ分析 / プローブ
Research Abstract

We present the facile technique of colorimetric SNP (single nucleotide polymorphism)analysis through DNA-templated cooperative complexation between a luminescent lanthanideion (Ln(III): Tb(III) or Eu(III)) and two ODN (oligodeoxyribonucleotide) conjugatescarrying a metal chelator. EDTA (ethylenediaminetetraacetic acid)) and1,10-phenanthroline (phen) were covalently attached to ODNs to form conjugates forapplication as capture and sensitizer probes. The sequences of the conjugates weredesigned so as to form a ternary tandem duplex with the target, where their auxiliaryunits face each other, providing a microenvironment to accommodate Ln(III). Thecharacteristic emissions of the Tb(III) and Eu(III) ions were clearly observed in thepresence of the full-matched target DNA. On the other hand, the emissions from the mixedsolutions with the mutant containing one base displacement were marginal.

Report

(3 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Research-status Report
  • Research Products

    (27 results)

All 2013 2012 2011 Other

All Journal Article (6 results) (of which Peer Reviewed: 6 results) Presentation (21 results) (of which Invited: 1 results)

  • [Journal Article] Versatile Allosteric Molecular Devices Based on Reversible Formation of Luminous Lanthanide Complexes2013

    • Author(s)
      Y. Kitamura, S. Yamamoto, Y. Osawa, H. Matsuura, T. Ihara
    • Journal Title

      Chem. Commun.

      Volume: 49 Issue: 3 Pages: 285-287

    • DOI

      10.1039/c2cc36979f

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] DNA Recognition and Analysis Through Cooperative Metal-ion Complex Formation of Split Probes2012

    • Author(s)
      T. Ihara, and Y. Kitamura
    • Journal Title

      BUNSEKI KAGAKU

      Volume: 61 Issue: 3 Pages: 193-206

    • DOI

      10.2116/bunsekikagaku.61.193

    • NAID

      10030135293

    • ISSN
      0525-1931
    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Photochemically relevant DNA-based Photochemically relevant DNA-based2012

    • Author(s)
      T. Ihara, and Y. Kitamura
    • Journal Title

      Photoch. Photobio. C

      Volume: 13 Pages: 148-167

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cooperative metal-ion complex formation through hybridization of split DNA probes2012

    • Author(s)
      Toshihiro Ihara, and Yusuke Kitamura
    • Journal Title

      BUNSEKI KAGAKU

      Volume: 61 Pages: 193-206

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Photochemically relevant DNA-based molecular systems enabling chemical and signal transductions and their analytical applications2012

    • Author(s)
      Toshihiro Ihara, and Yusuke Kitamura
    • Journal Title

      J. Photoch. Photobio. C

      Volume: 13 Pages: 148-167

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] スプリット型プローブの協同的希土類金属錯体形成を利用するDNAの認識及び検出2012

    • Author(s)
      井原敏博、北村裕介
    • Journal Title

      Bunseki Kagaku

      Volume: 61 Pages: 193-206

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Presentation] ルテニウムー白金混合錯体の鋳型特異的形成離脱を利用した遺伝子解析法の開発2013

    • Author(s)
      北村裕介、戸田健太郎、富森 岳、千喜良誠、井原 敏博
    • Organizer
      日本化学会第93春季年会
    • Place of Presentation
      立命館大学(滋賀県)
    • Related Report
      2012 Final Research Report
  • [Presentation] ルテニウムー白金混合錯体の鋳型特異的 形成離脱を利用した遺伝子解析法の開発2013

    • Author(s)
      北村裕介・戸田健太郎・富森 岳・千喜良 誠・井原敏 博
    • Organizer
      日本化学会第93春季年会
    • Place of Presentation
      立命館大学
    • Related Report
      2012 Annual Research Report
  • [Presentation] Versatile molecular devices based onthe reversible formation of luminouslanthanide complexes2012

    • Author(s)
      Yusuke Kitamura, Shikinari Yamamoto,Yuka Osawa, Toshihiro Ihara
    • Organizer
      第39回国際核酸化学シンポジウム
    • Place of Presentation
      名古屋大学(愛知県)
    • Related Report
      2012 Final Research Report
  • [Presentation] (金属錯体の特異的な形成および相互作用を利用した新規核酸プローブの開発2012

    • Author(s)
      北村裕介
    • Organizer
      日本分析化学会第61年会
    • Place of Presentation
      金沢大学(石川県)
    • Related Report
      2012 Final Research Report
  • [Presentation] 可逆的に形成する希土類金属錯体を基体としたアロステリック分子センサーの開発2012

    • Author(s)
      金沢大学(石川県)
    • Organizer
      日本分析化学会第61年会
    • Place of Presentation
      金沢大学(石川県)
    • Related Report
      2012 Final Research Report
  • [Presentation] Cooperativeformation of luminescent lanthanidecomplexes by metal chelator-DNAconjugates and their application tobiosensors2012

    • Author(s)
      Yusuke Kitamura, Shikinari Yamamoto,Mayumi Yamamoto, Yusuke Tsujimura, andToshihiro Ihara
    • Organizer
      11thEuropean BiologicalInorganic Chemistry Conference
    • Place of Presentation
      グラナダ (スペイン)
    • Related Report
      2012 Final Research Report
  • [Presentation] DNA上での脱離型二核錯体形成反応を利用した遺伝子解析法の開発2012

    • Author(s)
      北村裕介、戸田健太郎、富森岳、波多江智弘、三田聡司、千喜良誠、井原敏博
    • Organizer
      第6回バイオ関連化学シンポジウム
    • Place of Presentation
      北海道大学(北海道)
    • Related Report
      2012 Final Research Report
  • [Presentation] Versatile molecular beacons based on the reversible formation of luminouslanthanide complexes2012

    • Author(s)
      Yusuke Kitamura, Shikinari Yamamoto,Yuka Osawa, Toshihiro Ihara
    • Organizer
      The SecondAsian Chemical Biology Conference
    • Place of Presentation
      サザンビーチホテル&リゾート(沖縄県)
    • Related Report
      2012 Final Research Report
  • [Presentation] 金属配位基を有するDNAプローブの協同的複合体形成を利用した遺伝子解析2012

    • Author(s)
      北村裕介、山元識生、辻村祐輔、山本真優美、大澤由佳、井原敏博
    • Organizer
      第72回分析化学討論会
    • Place of Presentation
      鹿児島大学(鹿児島県)
    • Related Report
      2012 Final Research Report
  • [Presentation] Versatile molecular beacons based on the reversible formation of luminous lanthanide complexes2012

    • Author(s)
      usuke Kitamura, Shikinari Yamamoto, Yuka Osawa, Toshihiro Ihara
    • Organizer
      The Second Asian Chemical Biology Conference
    • Place of Presentation
      Southern Beach Hotel & Resort OKINAWA, Itoman, Okinawa
    • Related Report
      2012 Annual Research Report
  • [Presentation] DNA 上での脱離型二核錯体形成反応を利用した遺伝子解析法の開発2012

    • Author(s)
      北村 裕介,戸田 健太郎,富森 岳,波多江 智弘,三田 聡司,千喜良 誠,井原 敏博
    • Organizer
      第6回バイオ関連化学シンポジウム
    • Place of Presentation
      北海道大学
    • Related Report
      2012 Annual Research Report
  • [Presentation] Cooperative formation of luminescent lanthanide complexes by metal chelator-DNA conjugates and their application to biosensors2012

    • Author(s)
      Yusuke Kitamura, Shikinari Yamamoto, Mayumi Yamamoto, Yusuke Tsujimura, and Toshihiro Ihara
    • Organizer
      11th European Biological Inorganic Chemistry Conference
    • Place of Presentation
      GRANADA, SPEIN
    • Related Report
      2012 Annual Research Report
  • [Presentation] Versatile Molecular Devices Based on the Reversible Formation of Luminous Lanthanide Complexes2012

    • Author(s)
      Yusuke Kitamura, Shikinari Yamamoto, Yuka Osawa, Toshihiro Ihara
    • Organizer
      第39回国際核酸化学シンポジウム
    • Place of Presentation
      名古屋大学
    • Related Report
      2012 Annual Research Report
  • [Presentation] 金属配位基を有するDNAプローブの協同的複合体形成を利用した遺伝子解析2012

    • Author(s)
      北村裕介・山元識生・辻村祐輔・山本真優美・大澤由佳・井原敏博
    • Organizer
      第72回分析化学討論会
    • Place of Presentation
      鹿児島大学工学部
    • Related Report
      2012 Annual Research Report
  • [Presentation] 可逆的に形成する希土類金属錯体を基体としたアロステリック分子 センサーの開発2012

    • Author(s)
      北村 裕介・山元 識生・大澤 由佳・井原 敏博
    • Organizer
      日本分析化学会第61年会
    • Place of Presentation
      金沢大学
    • Related Report
      2012 Annual Research Report
  • [Presentation] 金属錯体の特異的な形成および相互作用を利用した新規核酸 プローブの開発2012

    • Author(s)
      北村 裕介
    • Organizer
      日本分析化学会第61年会
    • Place of Presentation
      金沢大学
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 金属配位子存在下における8-17デオキシリボザイムの切断活性2011

    • Author(s)
      北村裕介、山本飛鳥、田中毅志、上野正義、千喜良誠
    • Organizer
      第61回錯体化学討論会
    • Place of Presentation
      岡山理科大学(岡山県)
    • Related Report
      2012 Final Research Report
  • [Presentation] 金属配位子共存下における8-17DNAzymeの切断活性2011

    • Author(s)
      北村裕介、山本飛鳥、田中毅志、上野正義、千喜良誠
    • Organizer
      第5回バイオ関連化学シンポジウム
    • Place of Presentation
      エポカルつくば(茨城県)
    • Related Report
      2012 Final Research Report
  • [Presentation] Development of gene probes based on DNA-templated formation of platinum-ruthenium dinuclear complexes2011

    • Author(s)
      Yusuke Kitamura, Takeshi Tomiori,Kentaro Toda, Satoshi Mita, and MakotoChikira
    • Organizer
      15thInternationalConference on Biological Inorganic Chemistry
    • Place of Presentation
      バンクーバー(カナダ)
    • Related Report
      2012 Final Research Report
  • [Presentation] リンカー部位にシステインを有する金属配位性DNAコンジュゲートの合成とその一塩基多型解析への応用

    • Author(s)
      櫻井 悠司、中野 篤、野上 礼美、井原 敏博、北村 裕介、千喜良 誠
    • Organizer
      日本分析化学会第60年会
    • Place of Presentation
      名古屋大学東山キャンパス
    • Related Report
      2011 Research-status Report
  • [Presentation] Synthesis of the DNA conjugates with metal chelator through cysteine moiety and the application to SNPs analysis

    • Author(s)
      Yuji Sakurai,1 Atsushi Nakano, Ayami Nogami, Toshihiro Ihara, Yusuke Kitamura, Makoto Chikira
    • Organizer
      3rd Asian Conference on Coordination Chemistry
    • Place of Presentation
      ニューデリー(インド)
    • Related Report
      2011 Research-status Report

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Published: 2011-08-05   Modified: 2019-07-29  

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