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Theoretical explanations for the microbial effects on physicochemical environmental conditions from the stand point of Ecology, Geochemistry, and Evolution.

Research Project

Project/Area Number 23770024
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Ecology/Environment
Research InstitutionNara Women's University

Principal Investigator

SETO Mayumi  奈良女子大学, 自然科学系, 助教 (10512717)

Project Period (FY) 2011 – 2013
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2013: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2012: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2011: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Keywords微生物群集 / 数理モデル / 化学合成細菌 / 個体群動態 / 物質循環 / 作用-反作用 / 微生物生態系 / 国際研究者交流 / 国際情報交換 / カナダ / University of Waterloo / 作用・反作用 / 微生物群衆 / 海洋酸性化 / pH
Research Abstract

The objective of this study was to theoretically explore the biological effects on physicochemical environmental conditions from the stand point of ecology, evolution, and geochemistry. Mathematical models describing microbial ecosystems were analytically and numerically examined to compare the behavior of the models with and without microbial effects on environmental conditions (pH, concentrations of nutrients and heavy metals, and Gibbs free energy etc.) . The results indicated that microbial effects on environmental conditions affect ecosystem stability and population extinction risk. Furthermore, microbial activities may control fluxes and speciation of redox species, and consequently the Gibbs energy of ecosystems.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (25 results)

All 2014 2013 2012 2011 Other

All Journal Article (5 results) (of which Peer Reviewed: 5 results) Presentation (18 results) (of which Invited: 4 results) Remarks (2 results)

  • [Journal Article] The Gibbs free energy threshold for the invasion of a microbial population under kinetic constraints2014

    • Author(s)
      Mayumi Seto
    • Journal Title

      Geomicrobiology Journal

      Volume: 未定

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Individual and combined suppressive effects of submerged and floating-leaved macrophytes on algal blooms2013

    • Author(s)
      Mayumi Seto, Noriko Takamura, and Yoh Iwasa
    • Journal Title

      Journal of Thoretical Biology

      Volume: 319 Pages: 122-133

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] The effect of zinc on aquatic microbial ecosystems and the degradation of dissolved organic matter2013

    • Author(s)
      Mayumi Seto, Shigeki Wada, and Satoru Suzuki
    • Journal Title

      Chemosphere

      Volume: 90(3) Pages: 1091-1102

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Individual and combined suppressive effects of submerged and floating-leaved macrophytes on algal blooms2013

    • Author(s)
      Mayumi Seto, Noriko Takamura, and Yoh Iwasa
    • Journal Title

      Journal of Theoretical Biology

      Volume: 319 Pages: 122-133

    • DOI

      10.1016/j.jtbi.2012.11.016

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] The Gibbs free energy threshold for the invasion of a microbial population under kinetic constraints

    • Author(s)
      Mayumi Seto
    • Journal Title

      Geomicrobiology Journal

      Volume: (in press)

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Presentation] Invasibility of chemotrophic species : a combination of thermodynamic and kinetic approach2013

    • Author(s)
      Mayumi Seto
    • Organizer
      The 21th International Symposium on Environmental Biogeochemistry
    • Place of Presentation
      武漢,中国
    • Related Report
      2013 Final Research Report
  • [Presentation] 化学合成細菌群衆の存在を予測するための新しい指標 : ミニマルモデルによる解析2013

    • Author(s)
      瀬戸繭美
    • Organizer
      日本地球化学会年会2013
    • Place of Presentation
      つくば
    • Related Report
      2013 Final Research Report
  • [Presentation] Competition between microbial and abiotic Fe(II) oxidation : a kinetic modeling approach2013

    • Author(s)
      Mayumi Seto and Philippe Van Cappellen
    • Organizer
      Goldschmidt 2013
    • Place of Presentation
      Florence, Italy
    • Related Report
      2013 Final Research Report
  • [Presentation] Competition between Microbial and Abiotic Fe(II) Oxidation: A Kinetic Modeling Approach2013

    • Author(s)
      Mayumi Seto and Philippe Van Cappellen
    • Organizer
      Goldschmidt 2013
    • Place of Presentation
      Florence, Italy
    • Related Report
      2013 Annual Research Report
  • [Presentation] 化学合成細菌種の存在を予測するための新しい指標: ミニマルモデルによる解析2013

    • Author(s)
      瀬戸繭美
    • Organizer
      2013年度日本地球化学会年会
    • Place of Presentation
      福岡
    • Related Report
      2013 Annual Research Report
  • [Presentation] Invasibility of chemotrophic species: a combination of thermodynamic and kinetic approach2013

    • Author(s)
      Mayumi Seto
    • Organizer
      The 21th International Symposium on Environmental Biogeochemistry
    • Place of Presentation
      武漢、中国
    • Related Report
      2013 Annual Research Report
  • [Presentation] Mathematical model for the dynamics of chemolithotrophic bacteria2012

    • Author(s)
      Mayumi Seto
    • Organizer
      International Society for Environmental Biogeochemistry and Microbe-Mineral Interactions : Molecular to Global Scale Processes
    • Place of Presentation
      Cancun, Mexico
    • Related Report
      2013 Final Research Report
  • [Presentation] Shigeki Wada, and Masao Ishii, Potential biological pH buffering effect and regime shift2012

    • Author(s)
      Mayumi Seto
    • Organizer
      Third International Symposium on the Ocean in a High CO_2 world
    • Place of Presentation
      Monterey, California
    • Related Report
      2013 Final Research Report
  • [Presentation] 数理モデルで探る微生物生態系の法則性2012

    • Author(s)
      瀬戸繭美
    • Organizer
      日本地球化学会若手の会2012
    • Place of Presentation
      福岡
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] 生物は環境の「ノイズ」でしかないのか? -地球化学的問題に対する数理生物学的アプローチ2012

    • Author(s)
      瀬戸繭美
    • Organizer
      日本地球化学会年会2012
    • Place of Presentation
      福岡
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Shigeki Wada, and Masao Ishii, Possible effects of ocean acidification on a phytoplankton- pH feedback2012

    • Author(s)
      Mayumi Seto
    • Organizer
      China- Japan- Korea International Conference on Mathematical Biology
    • Place of Presentation
      釜山,韓国
    • Related Report
      2013 Final Research Report
  • [Presentation] Mathematical model for the dynamics of chemolithotrophic bacteria2012

    • Author(s)
      Mayumi Seto
    • Organizer
      International Society for Environmental Biogeochemistry and Microbe-Mineral Interactions: Molecular to Global Scale Processes
    • Place of Presentation
      Cancun, Mexico, November, 2012
    • Related Report
      2012 Research-status Report
  • [Presentation] Possible effects of ocean acidification on a phytoplankton-pH feedback2012

    • Author(s)
      Mayumi Seto, Shigeki Wada, and Masao Ishii
    • Organizer
      China-Japan-Korea International Conference on Mathematical Biology
    • Place of Presentation
      Busan, Korea
    • Related Report
      2012 Research-status Report
  • [Presentation] Potential biological pH buffering effect and regime shift2012

    • Author(s)
      Mayumi Seto, Shigeki Wada, and Masao Ishii
    • Organizer
      Third International Symposium on the Ocean in a High CO2 world
    • Place of Presentation
      Monterey, California
    • Related Report
      2012 Research-status Report
  • [Presentation] 生物は環境の「ノイズ」でしかないのか? - 地球化学的問題に対する数理生物学的アプローチ2012

    • Author(s)
      瀬戸 繭美
    • Organizer
      2012日本地球化学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] 数理モデルで探る微生物生態系の法則性2012

    • Author(s)
      瀬戸 繭美
    • Organizer
      2012日本地球化学会若手の会
    • Place of Presentation
      福岡
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] 亜鉛負荷による海洋微生物食物網並びに溶存有機炭素分解に対する影響予測2011

    • Author(s)
      瀬戸繭美
    • Organizer
      日本地球化学会年会2011
    • Place of Presentation
      札幌
    • Related Report
      2013 Final Research Report
  • [Presentation] 亜鉛負荷による海洋微生物食物網並びに溶存有機炭素分解に対する影響予測2011

    • Author(s)
      瀬戸繭美
    • Organizer
      地球化学会年会2011
    • Place of Presentation
      北海道大学、札幌
    • Related Report
      2011 Research-status Report
  • [Remarks]

    • URL

      http://www.e.ics.nara-wu.ac.jp/~seto/

    • Related Report
      2013 Final Research Report
  • [Remarks] 研究者(瀬戸繭美)のホームページ

    • URL

      http://www.e.ics.nara-wu.ac.jp/~seto/publications_ja.html

    • Related Report
      2013 Annual Research Report

URL: 

Published: 2011-08-05   Modified: 2019-07-29  

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