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Identifying the unknown novel fungal groups frequently detected in deep-sea and subsurface environments and clarifying their ecological role

Research Project

Project/Area Number 23770098
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Biodiversity/Systematics
Research InstitutionJapan Agency for Marine-Earth Science and Technology

Principal Investigator

NAGANO Yuriko  独立行政法人海洋研究開発機構, 海洋・極限環境生物圏領域, 研究員 (30512917)

Project Period (FY) 2011 – 2013
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2013: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2012: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2011: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Keywords真菌類 / 深海 / メタン冷湧水域 / Cryptomycota / 真菌 / メタン冷湧水 / 化学合成生態系 / 地殻 / 極限環境 / 真核微生物
Research Abstract

Over 300 fungal species were isolated from unique deep-sea environments, including methane cold seeps, 10,000m deep-sea trench, and whale fall sites in this study. Also, many novel unknown fungal groups were revealed in deep-sea environments by analyzing fungal diversity with single cell genomics and next generation sequencer. It was suggested that the group frequently detected from methane cold seep was highly novel and an early diverged group. This study led us to understand fungal diversity and its role in deep-sea environments, through isolating many new and previously unknown species, detecting unknown fungal groups, and using expressed sequence tag (EST) analysis of fungi reported only from deep-sea environments.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (26 results)

All 2014 2013 2012 2011 Other

All Journal Article (4 results) (of which Peer Reviewed: 4 results) Presentation (18 results) (of which Invited: 10 results) Book (4 results)

  • [Journal Article] Fungal diversity in deep-sea extreme environments2012

    • Author(s)
      Nagano, Y. & Nagahama, T.
    • Journal Title

      Fungal Ecology

      Volume: 5巻 Issue: 4 Pages: 463-471

    • DOI

      10.1016/j.funeco.2012.01.004

    • Related Report
      2013 Final Research Report 2012 Research-status Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Screening and Phylogenetic Analysis of Deep-Sea Bacteria Capable of Metabolizing Lignin-Derived Aromatic Compounds2012

    • Author(s)
      Y. Ohta*., S. Nishi, T. Haga, T. Tsubouchi, R. Hasegawa, M. Konishi, Y. Nagano, Y. Tsuruwaka, Y. Shimane, K. Mori, K. Usui, E. Suda, K. Tsutsui, A. Nishimoto, Y. Fujiwara, T. Maruyama, Y. Hatada
    • Journal Title

      Open Journal of Marine Science

      Volume: 2 Issue: 04 Pages: 177-187

    • DOI

      10.4236/ojms.2012.24021

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Unique substrate specificity of a thermostable glycosyl hydrolase from uncultured Anaerolinea, derived from bacterial mat on a subsurface geothermal water stream2012

    • Author(s)
      Masaaki KONISHI, Shinro NISHI, Hideto TAKAMI, Yasuhiro SHIMANE, Yuriko NAGANO, Kozue MORI, Yukari OHTA, Yuji HATADA
    • Journal Title

      Biotechnology letters

      Volume: 34 Issue: 10 Pages: 1887-1893

    • DOI

      10.1007/s10529-012-0983-7

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Abdel‐Wahab, M. A. & Miyazaki, M.Molecular evidence that deep‐branching fungi are major fungal components in deep‐sea methane cold‐seep sediments2011

    • Author(s)
      Nagahama, T., Takahashi, E., Nagano,Y.
    • Journal Title

      Environmental Microbiology

      Volume: 13巻 Issue: 8 Pages: 2359-2370

    • DOI

      10.1111/j.1462-2920.2011.02507.x

    • Related Report
      2013 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Presentation] Cryptic fungal diversity in deep-sea environments2013

    • Author(s)
      Nagano Y, and Nagahama T
    • Organizer
      AMC2013& 13^<th> IMFMS, China National Convention Center (CNCC)
    • Place of Presentation
      Beijing, China
    • Year and Date
      2013-08-21
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] 深海の未知なる多様性"泳ぐカビ"2013

    • Author(s)
      長野由梨子、長濱統彦
    • Organizer
      菌学会関東支部年次大会
    • Place of Presentation
      日本大学、千葉県
    • Year and Date
      2013-04-20
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Fungal diversity in deep-sea environments2012

    • Author(s)
      Nagano Y, Nagahama T, Konishi M, Shimane Y, Mori K, Ohta Y, Hatada Y
    • Organizer
      13th International Deep-sea Biology Symposium
    • Place of Presentation
      Museum of New Zealand, Wellington, New Zealand(口頭発表)
    • Year and Date
      2012-12-05
    • Related Report
      2013 Final Research Report
  • [Presentation] Fungal diversity in deep-sea environments2012

    • Author(s)
      Nagano Y, Nagahama T, Konishi M, Mori K, Shimane Y, Ohta Y, Hatada Y
    • Organizer
      BMS 2012 Fungal Interactions
    • Place of Presentation
      University of Alicante, Alicante, Spain
    • Year and Date
      2012-09-06
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] 深海極限環境中の真菌多様性2011

    • Author(s)
      長野由梨子、長濱統彦、小西正朗、森梢、嶋根康広、大田ゆかり、秦田勇二
    • Organizer
      第52回高圧討論会
    • Place of Presentation
      沖縄キリスト教学院、沖縄県(ポスター発表)
    • Year and Date
      2011-11-09
    • Related Report
      2013 Final Research Report
  • [Presentation] Fungal diversity in deep-sea environments2011

    • Author(s)
      Nagano Y
    • Organizer
      Joint Symposium between MBRC (KIOST) & JAMSTEC
    • Place of Presentation
      KIOST, Seoul, Korea
    • Year and Date
      2011-10-17
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Fungal diversity in deep-sea methane cold-seep ecosystems2011

    • Author(s)
      Nagano Y, Takishita K, Nagahama T, Watanabe H, Mori K, Konishi M, Ohta Y and Hatada Y
    • Organizer
      The 3rd World Conference on Marine Biodiversity
    • Place of Presentation
      Aberdeen Exhibition and Conference Centre, Aberdeen, U.K.(ポスター発表)
    • Year and Date
      2011-09-28
    • Related Report
      2013 Final Research Report
  • [Presentation] Fungal diversity in deep-sea methane cold-seep ecosystems2011

    • Author(s)
      Nagano Y, Takishita K, Nagahama T, Watanabe H, Mori K, Tsuruwaka Y, Konishi M, Ohta Y, Hatada Y
    • Organizer
      IUMS 2011
    • Place of Presentation
      Sapporo Convention Center, Sapporo, Japan
    • Year and Date
      2011-09-09
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] 深海・地殻内極限環境における真菌類の多様性2011

    • Author(s)
      長野由梨子、長濱統彦、秦田勇二
    • Organizer
      第14回マリンバイオテクノロジー学会
    • Place of Presentation
      グランシップ、静岡県
    • Year and Date
      2011-05-28
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Fungal diversity in deep-sea methane cold-seep ecosystems2011

    • Author(s)
      Nagano Y, Takishita K, Nagahama T, Watanabe H, Mori K, Tsuruwaka Y, Konishi M, Ohta Y, Hatada Y
    • Organizer
      IUMS 2011(招待講演)
    • Place of Presentation
      Sapporo Convention Center, Sapporo, Japan
    • Related Report
      2011 Research-status Report
  • [Presentation] 深海・地殻内極限環境における真菌類の多様性2011

    • Author(s)
      長野由梨子、長濱統彦、秦田勇二
    • Organizer
      第14回マリンバイオテクノロジー学会(招待講演)
    • Place of Presentation
      グランシップ、静岡県
    • Related Report
      2011 Research-status Report
  • [Presentation] 深海極限環境中の真菌多様性2011

    • Author(s)
      長野由梨子、長濱統彦、小西正朗、 森梢、 嶋根康広、大田ゆかり、秦田勇二
    • Organizer
      第52回高圧討論会
    • Place of Presentation
      沖縄キリスト教学院、沖縄県
    • Related Report
      2011 Research-status Report
  • [Presentation] Fungal diversity in deep-sea methane cold-seep ecosystems2011

    • Author(s)
      Nagano Y, Takishita K, Nagahama T, Watanabe H, Mori K, Konishi M, Ohta Y and Hatada Y
    • Organizer
      The 3rd World Conference on Marine Biodiversity
    • Place of Presentation
      Aberdeen Exhibition and Conference Centre, Aberdeen, U.K.
    • Related Report
      2011 Research-status Report
  • [Presentation] Cryptic fungal diversity in deep-sea environments.

    • Author(s)
      Nagano Y, and Nagahama T
    • Organizer
      AMC2013& 13th IMFMS
    • Place of Presentation
      China National Convention Center (CNCC), Beijing, China
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 深海の未知なる多様性“泳ぐカビ”

    • Author(s)
      長野由梨子、長濱統彦
    • Organizer
      菌学会関東支部年次大会
    • Place of Presentation
      日本大学、千葉県
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Fungal diversity in deep-sea environments

    • Author(s)
      Yuriko Nagano, Takahiko Nagahama, Masaaki Konishi, Kozue Mori, Yasuhiro Shimane, Yukari Ohta, Yuji Hatada
    • Organizer
      BMS Annual Scientific Meeting 2012 Fungal Interactions
    • Place of Presentation
      Alicante, Spain
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Fungal diversity in deep-sea environments

    • Author(s)
      Yuriko Nagano
    • Organizer
      2012 Joint Symposium between MBRC(KIOST) & JAMSTEC
    • Place of Presentation
      KOIST, Seoul, Korea
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Fungal diversity in deep-sea environments

    • Author(s)
      Yuriko Nagano, Takahiko Nagahama, Masaaki Konishi, Yasuhiro Shimane, Kozue Mori, Yukari Ohta, Yuji Hatada
    • Organizer
      13th International Deep-sea Biology Symposium
    • Place of Presentation
      Wellington, New Zealand
    • Related Report
      2012 Research-status Report
  • [Book] Cold-adapted yeasts in deep-sea environments. Cold-adapted Yeasts : Biodiversity, Adaptation Strategies and Biotechnological Significance2014

    • Author(s)
      Nagano Y, Nagahama T and Fumiyoshi Abe
    • Publisher
      Springer
    • Related Report
      2013 Final Research Report
  • [Book] Cold-adapted yeasts in deep-sea environmentsCold-adapted Yeasts: Biodiversity, Adaptation Strategies and Biotechnological Significance2014

    • Author(s)
      Nagano Y, Nagahama T, Fumiyoshi Abe.
    • Publisher
      Springer
    • Related Report
      2013 Annual Research Report
  • [Book] Cultured and uncultured fungal diversity in deep-sea environments. Biology of marine fungi2012

    • Author(s)
      Nagano Y, and Nagahama T
    • Publisher
      Springer
    • Related Report
      2013 Final Research Report
  • [Book] Cultured and Uncultured Fungal Diversity in Deep-Sea Environments (Chapter 9 in BIOLOGY OF MARINE FUNGI)2012

    • Author(s)
      Takahiko Nagahama, Yuriko Nagano
    • Total Pages
      15
    • Publisher
      Springer
    • Related Report
      2011 Research-status Report

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Published: 2011-08-05   Modified: 2019-07-29  

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