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Structural basis for the drug binding of human alpha1-acid glycoprotein

Research Project

Project/Area Number 23790052
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Physical pharmacy
Research InstitutionKumamoto University

Principal Investigator

NAKAMURA Teruya  熊本大学, 大学院・生命科学研究部, 助教 (40433015)

Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2012: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2011: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywords薬物結合蛋白質 / 構造活性相関 / X線結晶構造解析 / X線結晶構造解析
Research Abstract

Human a1-acid glycoprotein binds to a variety of drugs and therebyregulates their tissue distribution. AGP exists as a mixture of two genetic variants,the A and F1*S variants, which bind drugs with different selectivities. In this study,we determined crystal structures of the A variant in complex with two types of tricyclicdrugs, and revealed their binding modes in the pocket of the A variant. Also, we mutatedthe amino acid residues which are involved in drug binding, and examined the bindingproperties of the mutants.

Report

(3 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Research-status Report
  • Research Products

    (18 results)

All 2013 2012 2011

All Journal Article (6 results) (of which Peer Reviewed: 6 results) Presentation (12 results) (of which Invited: 2 results)

  • [Journal Article] 時分割タンパク質結晶学による DNA ポリメラーゼnのヌクレオチド転移反応の可視化2013

    • Author(s)
      中村照也,山縣ゆり子,Wei Yang
    • Journal Title

      日本結晶学会誌

      Volume: 55 Pages: 42-46

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystallization and preliminary X-ray analysis of human MTH1 with a homogeneous N-terminus.2013

    • Author(s)
      Koga Y, Inazato M, Nakamura T, Hashikawa C, Chirifu M, Michi A, Yamashita T, Toma S, Kuniyasu A, Ikemizu S, Nakabeppu Y, Yamagata Y.
    • Journal Title

      Acta Crystallogr Sect F Struct Biol Cryst Commun

      Volume: 69(Pt 1) Issue: 1 Pages: 45-48

    • DOI

      10.1107/s1744309112048002

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] 時分割タンパク質結晶学によるDNAポリメラーゼηのヌクレオチド転移反応の可視化2013

    • Author(s)
      中村照也
    • Journal Title

      日本結晶学会誌

      Volume: 55 Pages: 42-46

    • NAID

      10031156005

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Watching DNA polymerase η make a phosphodiester bond.2012

    • Author(s)
      Nakamura T.
    • Journal Title

      Nature

      Volume: 487 Issue: 7406 Pages: 196-201

    • DOI

      10.1038/nature11181

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Diverse Substrate Recognition and Hydrolysis Mechanisms of Human NUDT52011

    • Author(s)
      Takao Arimori, at al
    • Journal Title

      Nucleic Acids Res.

      Volume: 39 Issue: 20 Pages: 8972-8983

    • DOI

      10.1093/nar/gkr575

    • Related Report
      2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Structural Insights into Differences in Drug-binding Selectivity between Two Forms of Human α1-Acid Glycoprotein Genetic Variants, the A and F1^*S Forms2011

    • Author(s)
      K.Nishi, et al
    • Journal Title

      J.Biol.Chem

      Volume: 286 Issue: 16 Pages: 14427-14434

    • DOI

      10.1074/jbc.m110.208926

    • Related Report
      2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Presentation] DNA ポリメラーゼによるヌクレオチド転移反応の可視化2013

    • Author(s)
      中村照也
    • Organizer
      日本薬学会第133 年会
    • Place of Presentation
      パシフィコ横浜(横浜)
    • Year and Date
      2013-03-29
    • Related Report
      2012 Final Research Report
  • [Presentation] 時分割 X 線結晶構造解析による DNA ポリメラーゼnのヌクレオチド転移反応過程の追跡2013

    • Author(s)
      中村照也
    • Organizer
      回折構造生物 第169 委員会第42回研究会
    • Place of Presentation
      ゆうぽうと(東京)
    • Year and Date
      2013-02-21
    • Related Report
      2012 Final Research Report
  • [Presentation] 時分割X線結晶構造解析によるDNAポリメラーゼηのヌクレオチド転移反応過程の追跡2013

    • Author(s)
      中村照也
    • Organizer
      回折構造生物第169委員会 第42回研究会
    • Place of Presentation
      ゆうぽうと,東京
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] MutT による 8-oxo-dGTP 加水分解反応機構の解明2012

    • Author(s)
      中村照也
    • Organizer
      第29回日本薬学会九州支部大会
    • Place of Presentation
      熊本大学薬学部 (熊本)
    • Year and Date
      2012-12-08
    • Related Report
      2012 Final Research Report
  • [Presentation] Visualization ofoxidized nucleotide processing by E. coliMutT2012

    • Author(s)
      Teruya Nakamura
    • Organizer
      Zing conferences, Nucleic AcidsConference 2012
    • Place of Presentation
      TheOccidental Grand Xcaret (Mexico)
    • Year and Date
      2012-11-17
    • Related Report
      2012 Final Research Report
  • [Presentation] DNA ポリメラーゼnによるヌクレオチド転移反応の時分割X結晶構造解析2012

    • Author(s)
      中村照也
    • Organizer
      平成 24 年度日本結晶学会年会
    • Place of Presentation
      東北大学(仙台)
    • Year and Date
      2012-10-25
    • Related Report
      2012 Final Research Report
  • [Presentation] ヒト DNA polymerase・nによるヌクレオチド転移反応機構の解明2012

    • Author(s)
      中村照也
    • Organizer
      遺伝研研究集会 「遺伝情報の安定性を支える分子メカニズム」
    • Place of Presentation
      国立遺伝学研究所(三島)
    • Year and Date
      2012-10-03
    • Related Report
      2012 Final Research Report
  • [Presentation] Watching DNA polymerase n make a phosphodiester bond2012

    • Author(s)
      Teruya Nakamura
    • Organizer
      第50回日本生物物理学会年会
    • Place of Presentation
      名古屋大学(名古屋)
    • Year and Date
      2012-09-23
    • Related Report
      2012 Final Research Report
  • [Presentation] ヒトa1-酸性糖タンパク質による薬物結合の構造学的基盤2012

    • Author(s)
      中村 照也
    • Organizer
      第12回日本蛋白質科学会年会
    • Place of Presentation
      名古屋国際会議場(名古屋)
    • Year and Date
      2012-06-21
    • Related Report
      2012 Final Research Report
  • [Presentation] Visualization ofreaction processes by nucleic acidsenzymes2012

    • Author(s)
      Teruya Nakamura
    • Organizer
      DNA Repair Mini-Symposium Featuring Eminent Japanese Scientists atNIH
    • Place of Presentation
      National Institutes ofHealth (USA)
    • Year and Date
      2012-04-10
    • Related Report
      2012 Final Research Report
  • [Presentation] ヒトalpha1-酸性糖タンパク質による薬物結合の構造学的基盤2012

    • Author(s)
      中村照也
    • Organizer
      第12回日本蛋白質科学会年会
    • Place of Presentation
      名古屋国際会議場
    • Related Report
      2012 Annual Research Report
  • [Presentation] Visualization of reaction processes by nucleic acids enzymes2012

    • Author(s)
      Teruya Nakamura
    • Organizer
      DNA Repair Mini-Symposium Featuring Eminent Japanese Scientists at NIH
    • Place of Presentation
      NIH, USA
    • Related Report
      2012 Annual Research Report
    • Invited

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Published: 2011-08-05   Modified: 2019-07-29  

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