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Investigation of the mechanism of ion permeation through a highly cytotoxic peptide channel

Research Project

Project/Area Number 23790245
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field General physiology
Research InstitutionUniversity of Fukui

Principal Investigator

IWAMOTO Masayuki  福井大学, 医学部, 助教 (40452122)

Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2012: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2011: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Keywords生体膜 / チャネル / ペプチド / 細胞毒性 / 生理活性 / イオンチャネル
Research Abstract

In this study ion permeation mechanism of a highly cytotoxicpeptide from a marine sponge, polytheonamide B (pTB), was evaluated by use of planer lipid bilayer. We found that the pTB channel had one-ion pore. This result indicates that the mechanism underlying the ion permeation is different from that of the gramicidin A (gA) channel although both channels have similar β -helical structure. In addition, we revealed that the pTB channel exhibited voltage-dependent gating and fast transition between open and closed state. We suggest that, different from gA channels, the changes in the intra-peptide structure govern the gating of the pTB channel.

Report

(3 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Research-status Report
  • Research Products

    (32 results)

All 2013 2012 2011 Other

All Journal Article (16 results) (of which Peer Reviewed: 7 results) Presentation (14 results) Remarks (1 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Amphipathic antenna of an inward rectifier K+ channel responds to changes in the inner membrane leaflet2013

    • Author(s)
      Iwamoto M., Oiki S
    • Journal Title

      Proc. Natl. Acad. Sci. U. S. A.

      Volume: 110 Pages: 749-754

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] The open gate structure of the membrane-embedded KcsA potassium channel viewed from the cytoplasmic side2013

    • Author(s)
      Sumino A., Sumikama T., Iwamoto M., Dewa T., Oiki S
    • Journal Title

      Sci. Rep.

      Volume: 3 Pages: 1063-1063

    • NAID

      120005464899

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Biased Brownian stepping rotation of FoF1-ATP synthase driven by proton motive force2013

    • Author(s)
      Watanabe R., Tabata K.V., Iino R., Ueno H., Iwamoto M., Oiki S., Noji H
    • Journal Title

      Nat. Commun

      Volume: 4 Pages: 1631-1631

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] The sensing sites for the membrane inner lipids regulate the activation gating of the KcsA potassium channel2013

    • Author(s)
      Iwamoto M., Oiki S
    • Journal Title

      Biophys. J

      Volume: 104

    • URL

      http://www.sciencedirect.com/science/article/pii/S0006349512019790

    • Related Report
      2012 Final Research Report
  • [Journal Article] The sensor for the inner membrane lipid modulating the activation gating of the KcsA potassium channel2013

    • Author(s)
      Iwamoto M., Oiki S
    • Journal Title

      J. Physiol. Sci

      Volume: 63

    • Related Report
      2012 Final Research Report
  • [Journal Article] The sensing sites for the membrane inner lipids regulate the activation gating of the KcsA potassium channel2013

    • Author(s)
      M. Iwamoto
    • Journal Title

      Biophys. J.

      Volume: 104 Issue: 2 Pages: 123a-123a

    • DOI

      10.1016/j.bpj.2012.11.711

    • Related Report
      2012 Annual Research Report
  • [Journal Article] The asymmetriclipid bilayer revealed sidedness of the effective phospholipids on the single-channel properties of the KcsA potassium channel2012

    • Author(s)
      Iwamoto M., Oiki S
    • Journal Title

      Biophys. J

      Volume: 102 Pages: 537-537

    • URL

      http://www.cell.com/biophysj/fulltext/S0006-3495(11)04281-0

    • Related Report
      2012 Final Research Report
  • [Journal Article] Sidedness of the effective phospholipids on the function of the KcsA potassium channel revealed by the single-channel recording in the asymmetric lipid bilayer2012

    • Author(s)
      Iwamoto M., Oiki S
    • Journal Title

      J. Physiol. Sci

      Volume: 63

    • Related Report
      2012 Final Research Report
  • [Journal Article] 脂質二重膜組成が KcsA カリウムチャネル活性に及ぼす影響2012

    • Author(s)
      岩本真幸、老木成稔
    • Journal Title

      日本生理学雑誌

      Volume: 74 Pages: 66-66

    • URL

      http://geo.shunpike.info/jpsj/07402/074020051.pdf

    • Related Report
      2012 Final Research Report
  • [Journal Article] The Asymmetric Lipid Bilayer Revealed Sidedness of the Effective Phospholipids on the Single-Channel Properties of the KcsA Potassium Channel2012

    • Author(s)
      M. Iwamoto, S. Oiki
    • Journal Title

      Biophysical Journal

      Volume: 102

    • Related Report
      2011 Research-status Report
  • [Journal Article] Sidedness of the effective phospholipids on the function of the KcsA potassium channel revealed by the single-channel recording in the asymmetric lipid bilayer2012

    • Author(s)
      M. Iwamoto, S. Oiki
    • Journal Title

      The Journal of Physiological Sciences

      Volume: 62 Suppl.

    • Related Report
      2011 Research-status Report
  • [Journal Article] 脂質二重膜組成がKcsAカリウムチャネル活性に及ぼす影響2012

    • Author(s)
      岩本真幸、老木成稔
    • Journal Title

      日本生理学雑誌

      Volume: 74 Pages: 66-66

    • Related Report
      2011 Research-status Report
  • [Journal Article] Counting ion and water molecules in a streaming file through the open-filter structure of the K channel2011

    • Author(s)
      Iwamoto M., Oiki S
    • Journal Title

      J. Neurosci

      Volume: 31 Pages: 12180-12188

    • NAID

      120003353615

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Oriented reconstitution of a membrane protein in a giant unilamellar vesicle: Experimental verification with the potassium channel KcsA2011

    • Author(s)
      Yanagisawa M., Iwamoto M., Kato A., Yoshikawa K., Oiki S
    • Journal Title

      J. Am. Chem. Soc

      Volume: 133 Pages: 11774-11779

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Counting Ion and Water Molecules in A Streaming File through the Open-Filter Structure of A K Channel2011

    • Author(s)
      Iwamoto, M.. and S. Oiki
    • Journal Title

      J. Neuroscience

      Volume: 31 Issue: 34 Pages: 12180-12188

    • DOI

      10.1523/jneurosci.1377-11.2011

    • NAID

      120003353615

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Oriented reconstitution of a membrane protein in vesicles with asymmetric lipid compositions : Experimental verification with the potassium channel KcsA2011

    • Author(s)
      Yanagisawa, M., M. Iwamoto, A. Kato, K. Yoshikawa, and S. Oiki
    • Journal Title

      J. Am. Chem. Soc

      Volume: 133 Issue: 30 Pages: 11774-11779

    • DOI

      10.1021/ja2040859

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Presentation] The sensing sites for the membrane inner lipids regulate the activation gating of the KcsA potassium channel2013

    • Author(s)
      Iwamoto M., Oiki S
    • Organizer
      Biophysical Society 57th Annual Meeting (Philadelphia Convention Center
    • Place of Presentation
      Philadelphia, Pennsylvania, USA
    • Year and Date
      2013-02-03
    • Related Report
      2012 Final Research Report
  • [Presentation] KcsA カリウムチャネルの活性化ゲート開閉に影響を及ぼす細胞内脂質センサー部位の同定2013

    • Author(s)
      岩本真幸、老木成稔
    • Organizer
      第90回日本生理学会大会
    • Place of Presentation
      タワーホール船堀、東京
    • Related Report
      2012 Final Research Report
  • [Presentation] KcsAカリウムチャネルの活性化ゲート開閉に影響を及ぼす細胞内脂質センサー部位の同定2013

    • Author(s)
      岩本真幸
    • Organizer
      第90回日本生理学会大会
    • Place of Presentation
      タワーホール船堀、東京
    • Related Report
      2012 Annual Research Report
  • [Presentation] KcsA カリウムチャネル活性に影響を及ぼすリン脂質作用部位の同定2012

    • Author(s)
      岩本真幸、老木成稔
    • Organizer
      日本生物物理学会第50回年会
    • Place of Presentation
      名古屋大学、名古屋
    • Year and Date
      2012-09-24
    • Related Report
      2012 Final Research Report
  • [Presentation] 非対称脂質二重膜を用いた KcsA カリウムチャネル機能に影響を及ぼす陰イオン性リン脂質作用部位の検討2012

    • Author(s)
      岩本真幸、老木成稔
    • Organizer
      第89回日本生理学会大会
    • Place of Presentation
      松本市総合体育館、松本
    • Year and Date
      2012-03-29
    • Related Report
      2012 Final Research Report
  • [Presentation] The asymmetric lipid bilayer revealed sidedness of the effective phospholipids on the single-channel properties of the KcsA potassium channel2012

    • Author(s)
      Iwamoto M., Oiki S
    • Organizer
      Biophysical Society 56th Annual Meeting (San Diego Convention Center
    • Place of Presentation
      San Diego, California, USA
    • Year and Date
      2012-02-28
    • Related Report
      2012 Final Research Report
  • [Presentation] The asymmetric lipid bilayer revealed sidedness of the effective phospholipids on the single-channel properties of the KcsA potassium channel2012

    • Author(s)
      岩本真幸
    • Organizer
      アメリカ生物物理学会第56回年会
    • Place of Presentation
      サンディエゴコンベンションセンター(アメリカ・サンディエゴ)
    • Related Report
      2011 Research-status Report
  • [Presentation] 非対称脂質二重膜を用いたKcsAカリウムチャネル機能に影響を及ぼす陰イオン性リン脂質作用部位の検討2012

    • Author(s)
      岩本真幸
    • Organizer
      第89回日本生理学会大会
    • Place of Presentation
      松本市総合体育館(松本)
    • Related Report
      2011 Research-status Report
  • [Presentation] 脂質二重膜組成が KcsA カリウムチャネル活性に及ぼす影響2011

    • Author(s)
      岩本真幸、老木成稔
    • Organizer
      第58回中部日本生理学会
    • Place of Presentation
      福井県県民ホール・福井
    • Year and Date
      2011-11-01
    • Related Report
      2012 Final Research Report
  • [Presentation] KcsA カリウムチャネルの開閉に対する脂質二重膜組成の影響2011

    • Author(s)
      岩本真幸、老木成稔
    • Organizer
      日本生物物理学会第49回年会
    • Place of Presentation
      兵庫県立大学・姫路
    • Year and Date
      2011-09-18
    • Related Report
      2012 Final Research Report
  • [Presentation] KcsAカリウムチャネルの開閉に対する脂質二重膜組成の影響2011

    • Author(s)
      岩本真幸
    • Organizer
      日本生物物理学会第49回年会
    • Place of Presentation
      兵庫県立大学(姫路)
    • Related Report
      2011 Research-status Report
  • [Presentation] 脂質二重膜組成がKcsAカリウムチャネル活性に及ぼす影響2011

    • Author(s)
      岩本真幸
    • Organizer
      第58回中部日本生理学会
    • Place of Presentation
      福井県県民ホール(福井)
    • Related Report
      2011 Research-status Report
  • [Presentation] KcsAカリウムチャネル活性に影響を及ぼすリン脂質作用部位の同定

    • Author(s)
      岩本真幸
    • Organizer
      日本生物物理学会第50回年会
    • Place of Presentation
      名古屋大学、名古屋
    • Related Report
      2012 Annual Research Report
  • [Presentation] The sensing sites for the membrane inner lipids regulate the activation gating of the KcsA potassium channel

    • Author(s)
      M. Iwamoto
    • Organizer
      Biophysical Society 57th Annual Meeting
    • Place of Presentation
      Philadelphia, Pennsylvania, USA
    • Related Report
      2012 Annual Research Report
  • [Remarks] 福井大学医学部分子生理学研究室ホームページ

    • URL

      http://seiri1.med.lab.u-fukui.ac.jp/

    • Related Report
      2012 Final Research Report
  • [Patent(Industrial Property Rights)] 生体組織に範をとったエネルギー・情報生成膜システム2011

    • Inventor(s)
      老木成稔、岩本真幸
    • Industrial Property Rights Holder
      福井大学
    • Industrial Property Number
      2011-245986
    • Filing Date
      2011-11-09
    • Related Report
      2012 Final Research Report 2011 Research-status Report

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Published: 2011-08-05   Modified: 2019-07-29  

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