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Antiviral factor AID/APOBECs and Hepatitis B virus-related hepatocellular carcinogenesis

Research Project

Project/Area Number 23790780
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Gastroenterology
Research InstitutionKanazawa University

Principal Investigator

KITAMURA Kouichi  金沢大学, 医学系, 助教 (70378892)

Project Period (FY) 2011 – 2013
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2013: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2012: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2011: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywordsウイルス / がん / B型肝炎
Research Abstract

Recent studies have revealed that AID/APOBEC cytidine deaminase family members can induce C-to-U hypermutation on viral genome and restrict replication of various types of virus including HBV. Uracil residues in DNA are removed by base excision repair (BER) enzyme, uracil DNA glycosylase (UNG) when cytidine deamination is occurred in host genome.Here, we investigated whether uracil residues were removed by UNG from HBV and DHBV DNAs using in vitro cell culture system. When UNG activity was inhibited by the expression of UNG inhibitory protein (UGI), the APOBEC3G-mediated hypermutation of HBV nucleocapsid DNA was enhanced. The enhanced hypermutation by APOBEC3G and UGI was also observed in DHBV cccDNA, which was more frequent than in nucleocapsid DNA. We also found that overexpression of chicken AID caused hypermutation and reduction of DHBV cccDNA levels. These results indicate that UNG excises uracils from viral genome deaminated by AID/APOBEC protein during or after cccDNA formation.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (29 results)

All 2014 2013 2012 2011 Other

All Journal Article (8 results) (of which Peer Reviewed: 7 results) Presentation (20 results) Remarks (1 results)

  • [Journal Article] APOBEC3 deaminases induce hypermutation in human papillomavirus 16 DNA upon beta interferon stimulation.2014

    • Author(s)
      Wang Z, Wakae K, Kitamura K, Aoyama S, Liu G, Koura M, Monjurul AM, Kukimoto I, Muramatsu M.
    • Journal Title

      Journal of Virology

      Volume: 88 Issue: 2 Pages: 1308-1317

    • DOI

      10.1128/jvi.03091-13

    • NAID

      120005368221

    • URL

      http://dspace.lib.kanazawa-u.ac.jp/dspace/handle/2297/36486

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Interleukin-1 and tumor necrosis factor-α trigger restriction of hepatitis B virus infection via a cytidine deaminase activation-induced cytidine deaminase (AID)2013

    • Author(s)
      Watashi K, Liang G, Iwamoto M, Marusawa H, Uchida N, Daito T, Kitamura K, Muramatsu M, Ohashi H, Kiyohara T, Suzuki R, Li J, Tong S, Tanaka Y, Murata K, Aizaki H, Wakita T
    • Journal Title

      J Biol Chem

      Volume: 288 Issue: 44 Pages: 31715-31727

    • DOI

      10.1074/jbc.m113.501122

    • NAID

      120006602140

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Concerted action of activation-induced cytidine deaminase and uracil-DNA glycosylase reduces covalently closed circular DNA of duck hepatitis B virus.2013

    • Author(s)
      Chowdhury S, Kitamura K, Simadu M, Koura M, Muramatsu M.
    • Journal Title

      FEBS Letters

      Volume: 587 Issue: 18 Pages: 3148-3152

    • DOI

      10.1016/j.febslet.2013.07.055

    • NAID

      120005327231

    • URL

      http://dspace.lib.kanazawa-u.ac.jp/dspace/handle/2297/35619

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Uracil DNA glycosylase counteracts APOBEC3G-induced hypermutation of hepatitis B viral genomes: excision repair of covalently closed circular DNA.2013

    • Author(s)
      Kitamura K, Wang Z, Chowdhury S, Simadu M, Koura M, Muramatsu M.
    • Journal Title

      PLoS Pathogens

      Volume: 9 Issue: 5 Pages: e1003361-e1003361

    • DOI

      10.1371/journal.ppat.1003361

    • NAID

      120005304726

    • URL

      http://dspace.lib.kanazawa-u.ac.jp/dspace/handle/2297/35146

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Role of activation-induced cytidine deaminase in the development of oral squamous cell carcinoma2013

    • Author(s)
      Nakanishi Y, Kondo S, Wakisaka N, Tsuji A, Endo K, Murono S, Ito M, Kitamura K, Muramatsu M and Yoshizaki T
    • Journal Title

      Plos One

      Volume: 8(4) Issue: 4 Pages: e62066-e62066

    • DOI

      10.1371/journal.pone.0062066

    • NAID

      120006602141

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] RNA editing of hepatitis B virus transcripts by activation-induced cytidine deaminase.2013

    • Author(s)
      Liang, G., K. Kitamura, Z. Wang, G. Liu, S. Chowdhury, W. Fu, M. Koura, K. Wakae, T. Honjo, and M. Muramatsu
    • Journal Title

      Proc Natl Acad Sci U S A

      Volume: 110 Issue: 6 Pages: 2246-2251

    • DOI

      10.1073/pnas.1221921110

    • NAID

      120005253841

    • URL

      http://dspace.lib.kanazawa-u.ac.jp/dspace/handle/2297/34139

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Uracil DNA Glycosylase Counteracts APOBEC3G-Induced Hypermutation of Hepatitis B Viral Genomes: Excision Repair of Covalently Closed Circular DNA2013

    • Author(s)
      Kouichi Kitamura, Zhe Wang, Sajeda Chowdhury, Miyuki Simadu, Miki Koura, and Masamichi Muramatsu
    • Journal Title

      PLoS Pathogens

      Volume: in press

    • NAID

      120005304726

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] APOBEC3Gの抗ウイルス作用2011

    • Author(s)
      村松正道、喜多村晃一
    • Journal Title

      臨床免疫・アレルギー科

      Volume: 56 Pages: 206-212

    • NAID

      40018972287

    • Related Report
      2011 Research-status Report
  • [Presentation] B型肝炎ウイルスcccDNAを標的とするAID/APOBEC及びUNGタンパク質の抗ウイルス機構2013

    • Author(s)
      喜多村晃一
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸ポートピアホテル
    • Year and Date
      2013-12-03
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] B型肝炎ウイルスcccDNAに対する脱アミノ化酵素AIDの作用2013

    • Author(s)
      喜多村晃一
    • Organizer
      第61回日本ウイルス学会学術集会
    • Place of Presentation
      神戸国際会議場
    • Year and Date
      2013-11-12
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] Concerted action of activation-induced cytidine deaminase and uracil-DNA glycosylase reduces covalently closed circular DNA of duck hepatitis B virus2013

    • Author(s)
      Kitamura K
    • Organizer
      2013 International Meeting on Molecular Biology Hepatitis B Viruses
    • Place of Presentation
      Shanghai Medical College Fudan University, Shanghai, China(Award of Excellence in Poster Presentation受賞)
    • Year and Date
      2013-10-21
    • Related Report
      2013 Final Research Report
  • [Presentation] Concerted action of AID/APOBEC proteins and uracil-DNA glycosylase against covalently closed circular DNA of hepatitis B virus2013

    • Author(s)
      喜多村晃一
    • Organizer
      第12回あわじしま感染症・免疫フォーラム
    • Place of Presentation
      淡路夢舞台国際会議場
    • Year and Date
      2013-09-11
    • Related Report
      2013 Final Research Report
  • [Presentation] 塩基除去修復機構はAPOBEC3Gが引き起こすB型肝炎ウイルスゲノム高頻度変異を修復する2012

    • Author(s)
      喜多村晃一
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡国際会議場・マリンメッセ福岡
    • Year and Date
      2012-12-12
    • Related Report
      2013 Final Research Report 2012 Research-status Report
  • [Presentation] 塩基除去修復機構はAPOBEC3Gが引き起こすB型肝炎ウイルス変異を修復しウイルス複製に寄与する2012

    • Author(s)
      喜多村晃一
    • Organizer
      第60回日本ウイルス学会学術集会
    • Place of Presentation
      グランキューブ大阪(大阪国際会議場)
    • Year and Date
      2012-11-15
    • Related Report
      2013 Final Research Report
  • [Presentation] Base excision repair counteracts the hypermutation of hepatitis B virus genomes by APOBEC3G2012

    • Author(s)
      Kitamura K
    • Organizer
      The 4th Japan- Korea Joint Symposiumon Recent Advance in Medical Science
    • Place of Presentation
      金沢大学医学部記念館メモリアルホール
    • Year and Date
      2012-11-07
    • Related Report
      2013 Final Research Report
  • [Presentation] Uracil-DNA Glycosylase (UNG) Counteracts the Hepadnavirus Hypermutation and Restriction Induced by APOBEC3G2012

    • Author(s)
      Kitamura K
    • Organizer
      2012 International Meeting on Molecular Biology of Hepatitis B Viruses
    • Place of Presentation
      University of Oxford Christ Church & Examination Schools Oxford, England
    • Year and Date
      2012-09-23
    • Related Report
      2013 Final Research Report
  • [Presentation] Base Excision Repair Pathway in Hypermutated Hepatitis B virus Genome高頻度突然変異を受けたB型肝炎ウイルスゲノムにおける塩基除去修復機構2011

    • Author(s)
      Kitmaura K
    • Organizer
      第40回日本免疫学会学術集会
    • Place of Presentation
      幕張メッセ
    • Year and Date
      2011-11-27
    • Related Report
      2013 Final Research Report
  • [Presentation] Contribution of Uracil DNA Glycosylase to anti-Hepatitis B virus effect of APOBEC3G2011

    • Author(s)
      Kitamura K
    • Organizer
      IUMS2011, XV International Congress of Virology第59回日本ウイルス学会学術集会合同開催
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2011-09-13
    • Related Report
      2013 Final Research Report
  • [Presentation] racil Excision Repair Pathway in APOBEC3G-edited Hepatitis B virus Genome2011

    • Author(s)
      Kitamura K
    • Organizer
      日本分子生物学会第11回春季シンポジウム金沢国際がん生物学シンポジウム
    • Place of Presentation
      石川県立音楽堂
    • Year and Date
      2011-05-25
    • Related Report
      2013 Final Research Report
  • [Presentation] Uracil Excision Repair Pathway in APOBEC3G-edited Hepatitis B virus Genome2011

    • Author(s)
      Kouichi Kitamura, Zhe Wang, Sajeda Chowdhury, Miyuki Simadu, Miki Koura, and Masamichi Muramatsu
    • Organizer
      日本分子生物学会第11回春季シンポジウム 金沢国際がん生物学シンポジウム
    • Place of Presentation
      石川県立音楽堂(石川県)
    • Related Report
      2011 Research-status Report
  • [Presentation] Contribution of Uracil DNA Glycosylase to anti-Hepatitis B virus effect of APOBEC3G2011

    • Author(s)
      Kitamura Kouichi, Wang Zhe, Chowdhury Sajeda, Shimazu Miyuki, Koura Miki, Muramatsu Masamichi
    • Organizer
      IUMS2011, XVInternational Congress of Virology第59回日本ウイルス学会学術集会合同開催
    • Place of Presentation
      札幌コンベンションセンター(北海道)
    • Related Report
      2011 Research-status Report
  • [Presentation] Base Excision Repair Pathway in Hypermutated Hepatitis B virus Genome 高頻度突然変異を受けたB型肝炎ウイルスゲノムにおける塩基除去修復機構2011

    • Author(s)
      Kitamura Kouichi, Wang Zhe, Chowdhury Sajeda, Shimazu Miyuki, Koura Miki, Muramatsu Masamichi
    • Organizer
      第40回日本免疫学会学術集会
    • Place of Presentation
      幕張メッセ(千葉県)
    • Related Report
      2011 Research-status Report
  • [Presentation] Concerted action of AID/APOBEC proteins and uracil-DNA glycosylase against covalently closed circular DNA of hepatitis B virus

    • Author(s)
      Kouichi Kitamura
    • Organizer
      The 12th Awaji International Forum on Infection and Immunity
    • Place of Presentation
      淡路夢舞台国際会議場
    • Related Report
      2013 Annual Research Report
  • [Presentation] Concerted action of activation-induced cytidine deaminase and uracil-DNA glycosylase reduces covalently closed circular DNA of duck hepatitis B virus

    • Author(s)
      Kouichi Kitamura
    • Organizer
      2013 International Meeting on Molecular Biology of Hepatitis B Viruses
    • Place of Presentation
      Shanghai Medical College Fudan University, China
    • Related Report
      2013 Annual Research Report
  • [Presentation] Uracil-DNA Glycosylase (UNG) Counteracts the Hepadnavirus Hypermutation and Restriction Induced by APOBEC3G

    • Author(s)
      Kouichi Kitamura
    • Organizer
      International Meeting on Molecular Biology of Hepatitis B Viruses
    • Place of Presentation
      University of Oxford Christ Church & Examination Schools Oxford, England
    • Related Report
      2012 Research-status Report
  • [Presentation] Base excision repair counteracts the hypermutation of hepatitis B virus genomes by APOBEC3G

    • Author(s)
      Kouichi Kitamura
    • Organizer
      The 4th Japan-Korea Joint Symposium on Recent Advance in Medical Science
    • Place of Presentation
      金沢大学医学部記念館メモリアルホール
    • Related Report
      2012 Research-status Report
  • [Presentation] Activation-induced cytidine deaminase and base excision pathway induced hepadnavirus cccDNA degradation

    • Author(s)
      Sajeda Chowdhury
    • Organizer
      The 4th Japan-Korea Joint Symposium on Recent Advance in Medical Science
    • Place of Presentation
      金沢大学医学部記念館メモリアルホール
    • Related Report
      2012 Research-status Report
  • [Presentation] 塩基除去修復機構はAPOBEC3Gが引き起こすB型肝炎ウイルス変異を修復しウイルス複製に寄与する

    • Author(s)
      喜多村晃一
    • Organizer
      第60回日本ウイルス学会学術集会
    • Place of Presentation
      グランキューブ大阪(大阪国際会議場)
    • Related Report
      2012 Research-status Report
  • [Remarks] 研究室Webサイト

    • URL

      http://molgenet.w3.kanazawa-u.ac.jp/home.html

    • Related Report
      2013 Annual Research Report

URL: 

Published: 2011-08-05   Modified: 2019-07-29  

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