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生体触媒による重質油改質に向けた異種細菌の協調的なアスファルテン生分解機構の理解

Research Project

Project/Area Number 23K05013
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 38020:Applied microbiology-related
Research InstitutionYokohama City University

Principal Investigator

Robert Kanaly  横浜市立大学, 理学部, 教授 (00448656)

Co-Investigator(Kenkyū-buntansha) 守 次朗  横浜市立大学, 理学部, 助教 (10835143)
Project Period (FY) 2023-04-01 – 2026-03-31
Project Status Granted (Fiscal Year 2023)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2025: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2024: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2023: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
KeywordsPAHs / asphaltenes / biotransformation / Sphingobium / Pseudomonas / 重質油改質技術 / 環境微生物 / 多環芳香族炭化水素 / アスファルテン
Outline of Research at the Start

本研究では、環境微生物に対する代謝プロファイリングとゲノム生化学解析を通して、共存する異種細菌による協調的な鎖状アルキル化多環芳香族炭化水素(CA-PAHs)生分解機構を証明すると共に、重質油改質技術への応用に向けたその実用性を評価することを目指している。具体的には、(1)異なる分子構造を持つモデルCA-PAHsに対する各細菌株の生分解能力の調査、(2)細菌株間のクロスフィーディングによる協調的CA-PAHs生分解機構の証明、(3)重質油を用いた培養試験による各細菌株の重質油改質に向けた実用性の評価 を実施する予定である。

Outline of Annual Research Achievements

Determined the biotransformation capabilities of Sphingobium bacterium when it was exposed to different polyalkyl chain-alkylated monoaromatic and polycyclic aromatic hydrocarbons (PAHs) and constructed biotransformation pathways for their biodegradation by comprehensive liquid chromatography electrospray ionization tandem mass spectrometry.

Cooperative biodegradation of a model asphaltene long-chain PAH was investigated by a compartmentalized approach using bacteria belonging to the genera Pseudomonas and Sphingobium. Pseudomonas reduced the size (and molar mass) of 1-dodecylnaphthalene through subterminal alkyl chain cutting resulting in shorter alkyl chain polyaromatics that were further biotransformed by Sphingobium to ultimately produce aromatic ring-opened chain-shortened compounds.

Current Status of Research Progress
Current Status of Research Progress

2: Research has progressed on the whole more than it was originally planned.

Reason

Determined mechanisms of biotransformation of chain-alkylated PAHs by Sphingobium. Made progress on the application of high resolution mass spectrometry (HR-MS) methods development for analyzing cooperative bacterial biotransformation of a model asphaltene compound.

Strategy for Future Research Activity

Develop methods for structural predictions and docking simulations of Sphingobium and Pseudomonas oxygenase enzymes and target compounds. Conduct biodegradation experiments using heavy oil. Produce heavy oil fractions from heavy oil to be used in bacterial biotransformation assays. Develop methods for IR analyses to evaluate biotransformation of complex hydrocarbon mixtures. Investigate the biotransformation of tethered aromatic compounds.

Report

(1 results)
  • 2023 Research-status Report
  • Research Products

    (11 results)

All 2024 2023

All Journal Article (4 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 4 results,  Open Access: 2 results) Presentation (7 results) (of which Int'l Joint Research: 2 results)

  • [Journal Article] Nondesulfurizing benzothiophene biotransformation to hetero and homodimeric ortho-substituted diaryl disulfides by the model PAH-degrading Sphingobium barthaii2023

    • Author(s)
      Nemoto Yuki、Ozawa Kohei、Mori Jiro F.、Kanaly Robert A.
    • Journal Title

      Biodegradation

      Volume: 2023 Issue: 3 Pages: 1-19

    • DOI

      10.1007/s10532-023-10014-9

    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Genomic analysis of a marine alphaproteobacterium Sagittula sp. strain MA-2 that carried eight plasmids2023

    • Author(s)
      Abe Mayuko、Kanaly Robert A.、Mori Jiro F.
    • Journal Title

      Marine Genomics

      Volume: 72 Pages: 101070-101070

    • DOI

      10.1016/j.margen.2023.101070

    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Whole-genome sequence of Periconia sp. strain TS-2, an ascomycete fungus isolated from a freshwater outflow and capable of Mn(II) oxidation2023

    • Author(s)
      Tsushima Shihori、Kanaly Robert A.、Mori Jiro F.
    • Journal Title

      Microbiology Resource Announcements

      Volume: 12 Issue: 12

    • DOI

      10.1128/mra.00599-23

    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] The GGDEF protein Dgc2 suppresses both motility and biofilm formation in the filamentous cyanobacterium Leptolyngbya boryana2023

    • Author(s)
      Toida Kazuma、Kushida Wakana、Yamamoto Hiroki、Yamamoto Kyoka、Ishii Kaichi、Uesaka Kazuma、Kanaly Robert A.、Kutsuna Shinsuke、Ihara Kunio、Fujita Yuichi、Iwasaki Hideo
    • Journal Title

      Microbiology Spectrum

      Volume: 11 Issue: 5 Pages: 1-27

    • DOI

      10.1128/spectrum.04837-22

    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Biodegradation of hydrocarbons in atmospheric distillation column residue oil by single strains of bacteria.2024

    • Author(s)
      Sakai, M, Mori, J. F, Kanaly, R.A
    • Organizer
      The 2024 Annual Meeting of the Japan Society for Bioscience, Biotechnology and Agrochemistry (JSBBA 2024)
    • Related Report
      2023 Research-status Report
  • [Presentation] Biodegradation of the polyalkyl chain-alkylated polycyclic aromatic hydrocarbon (CA-PAH), 1-butylnaphthalene by a soil bacterium2023

    • Author(s)
      Sakai, M, Mori, J. F, Kanaly, R.A
    • Organizer
      The Annual Meeting of the Japan Society for Biotechnology (JSEB 2023)
    • Related Report
      2023 Research-status Report
  • [Presentation] Discovery of a novel PAH biodegradation gene cluster on a plasmid in the marine bacterium Sagittula sp.2023

    • Author(s)
      Abe, M, Kayama, G, Kanaly, R.A, Mori, J. F
    • Organizer
      The 36th Annual Meeting of the Japanese Society of Microbial Ecology (JSME 2023) and the 13th Annual Asian Symposium on Microbial Ecology (ASME)
    • Related Report
      2023 Research-status Report
  • [Presentation] Application of LC-ESI-HRMS metabolomics to study the cooperative bacterial biotransformation of a model asphaltene2023

    • Author(s)
      Sakai, M, Mori, J. F, Kanaly, R.A
    • Organizer
      The 36th Annual Meeting of the Japanese Society of Microbial Ecology (JSME 2023) and the 13th Annual Asian Symposium on Microbial Ecology (ASME)
    • Related Report
      2023 Research-status Report
    • Int'l Joint Research
  • [Presentation] PHA production from waste biodiesel glycerol and levulinic acid by a novel methanol-tolerant bacterial strain Cupriavidus necator KK102023

    • Author(s)
      Nagai, M, Mori, J. F, Kanaly, R.A
    • Organizer
      The 36th Annual Meeting of the Japanese Society of Microbial Ecology (JSME 2023) and the 13th Annual Asian Symposium on Microbial Ecology (ASME)
    • Related Report
      2023 Research-status Report
  • [Presentation] Mori, J. F, Abe, M, Kanaly, R.A, Mori, J. F2023

    • Author(s)
      Inconspicuous but indispensable: Phenanthrene biodegradation by Sagittula that represented a minor population in a phenanthrene enriched marine bacterial consortium
    • Organizer
      The 36th Annual Meeting of the Japanese Society of Microbial Ecology (JSME 2023) and the 13th Annual Asian Symposium on Microbial Ecology (ASME)
    • Related Report
      2023 Research-status Report
    • Int'l Joint Research
  • [Presentation] Function of the second messenger cyclic di-GMP in Synechococcus elongatus PCC 79422023

    • Author(s)
      Yamaguchi, C, R. A. Kanaly, E. Nishizaki, K. Yamashita, K. Satsuki, M. Harada, M. Hirai, M. Tsukamoto, S. Aoki, Y. Nakahira, Y. Furuike, S. Akiyama, M. Fang, S. Golden, S. Kutsuna
    • Organizer
      The 65th Meeting of the Japanese Society of Plant Physiologists
    • Related Report
      2023 Research-status Report

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Published: 2023-04-13   Modified: 2024-12-25  

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