• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Artificial Intelligence analysis of the immune-checkpoint and immuno-oncology in B-cell non-Hodgkin lymphoma

Research Project

Project/Area Number 23K06454
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 49020:Human pathology-related
Research InstitutionTokai University

Principal Investigator

カレーラス ジュアキム  東海大学, 医学部, 講師 (90637191)

Project Period (FY) 2023-04-01 – 2026-03-31
Project Status Granted (Fiscal Year 2023)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2025: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2024: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2023: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywordslymphoma / targeted sequencing / immuno-oncology / immune microenvironment / immune checkpoint / molecular pathology / hematological neoplasia / NGS / リンパ腫 / 免疫腫瘍学 / 人工知能 / 免疫チェックポイント / 次世代シーケンシング
Outline of Research at the Start

この研究では、集学的アプローチを使用してリンパ腫の免疫チェックポイントを分析しています。B細胞性リンパ腫の解析を行います。重要なマーカーは、PD-L1、CSF1R、IL-10 などです。免疫組織化学、遺伝子発現解析、コピー数・LOH解析、次世代標的変異解析などを実施します。解析には、従来のバイオインフォマティクスだけでなく、人工知能(機械学習、ニューラルネットワーク)なども含まれます。

Outline of Annual Research Achievements

BCL6-rearrangement (BCL6-R) is associated with a favorable prognosis of follicular lymphoma (FL), but the mechanism is unknown. We analyzed the clinicopathological, immune microenvironment (immune checkpoint, immuno-oncology markers), and mutational profiles of 10 BCL6-R-positive FL, and 19 BCL6-R-positive diffuse large B-cell lymphoma (DLBCL) cases (both BCL2-R and MYC-R negative). A custom-made panel included 168 genes related to aggressive B-cell lymphomas and FL. Both BCL6-R-positive FL and BCL6-R-positive DLBCL had a common mutational profile; but also, differences. DLBCL cases had a higher density of microenvironment markers.

Current Status of Research Progress
Current Status of Research Progress

2: Research has progressed on the whole more than it was originally planned.

Reason

The project is progressing well, and as expected.

Strategy for Future Research Activity

We will continue the evaluation of immuno-oncology markers in larger series of cases and plan next set of NGS analysis.

Report

(1 results)
  • 2023 Research-status Report
  • Research Products

    (18 results)

All 2024 2023 Other

All Journal Article (7 results) (of which Int'l Joint Research: 7 results,  Peer Reviewed: 7 results,  Open Access: 7 results) Presentation (6 results) (of which Invited: 1 results) Remarks (5 results)

  • [Journal Article] Mutational, immune microenvironment, and clinicopathological profiles of diffuse large B-cell lymphoma and follicular lymphoma with BCL6 rearrangement2024

    • Author(s)
      Carreras Joaquim、Ikoma Haruka、Kikuti Yara Yukie、Miyaoka Masashi、Hiraiwa Shinichiro、Tomita Sakura、Kondo Yusuke、Ito Atsushi、Nagase Shunsuke、Miura Hisanobu、Kawada Hiroshi、Roncador Giovanna、Campo Elias、Hamoudi Rifat、Nakamura Naoya
    • Journal Title

      Virchows Archiv

      Volume: 484 Issue: 4 Pages: 657-676

    • DOI

      10.1007/s00428-024-03774-z

    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Artificial Intelligence, Lymphoid Neoplasms, and Prediction of MYC, BCL2, and BCL6 Gene Expression Using a Pan-Cancer Panel in Diffuse Large B-Cell Lymphoma2024

    • Author(s)
      Carreras Joaquim、Nakamura Naoya
    • Journal Title

      Hemato

      Volume: 5 Issue: 2 Pages: 119-143

    • DOI

      10.3390/hemato5020011

    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Artificial Intelligence Analysis and Reverse Engineering of Molecular Subtypes of Diffuse Large B-Cell Lymphoma Using Gene Expression Data2024

    • Author(s)
      Carreras Joaquim、Yukie Kikuti Yara、Miyaoka Masashi、Miyahara Saya、Roncador Giovanna、Hamoudi Rifat、Nakamura Naoya
    • Journal Title

      BioMedInformatics

      Volume: 4 Issue: 1 Pages: 295-320

    • DOI

      10.3390/biomedinformatics4010017

    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Tumor heterogeneity and immune-evasive T follicular cell lymphoma phenotypes at single-cell resolution2023

    • Author(s)
      Suma Sakurako、Suehara Yasuhito、Fujisawa Manabu、Abe Yoshiaki、Hattori Keiichiro、Sakata-Yanagimoto Mamiko
    • Journal Title

      Leukemia

      Volume: 38 Issue: 2 Pages: 340-350

    • DOI

      10.1038/s41375-023-02093-7

    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Hepatic niche leads to aggressive natural killer cell leukemia proliferation through transferrin-transferrin receptor 1 axis2023

    • Author(s)
      Kameda Kazuaki, Yanagiya Ryo, Miyatake Yuji, etal. and Kotani Ai
    • Journal Title

      Blood Journal

      Volume: 142(4) Pages: 352-364

    • DOI

      10.1182/blood.2022018597

    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Mutational Profile and Pathological Features of a Case of Interleukin-10 and RGS1-Positive Spindle Cell Variant Diffuse Large B-Cell Lymphoma2023

    • Author(s)
      Carreras Joaquim、Kikuti Yara Yukie、Miyaoka Masashi、Hiraiwa Shinichiro、Tomita Sakura、Ikoma Haruka、Kondo Yusuke、Ito Atsushi、Nagase Shunsuke、Miura Hisanobu、Roncador Giovanna、Colomo Lluis、Hamoudi Rifat、Campo Elias、Nakamura Naoya
    • Journal Title

      Hematology Reports

      Volume: 15 Issue: 1 Pages: 188-200

    • DOI

      10.3390/hematolrep15010020

    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] The pathobiology of follicular lymphoma2023

    • Author(s)
      Carreras Joaquim
    • Journal Title

      Journal of Clinical and Experimental Hematopathology

      Volume: 63 Issue: 3 Pages: 152-163

    • DOI

      10.3960/jslrt.23014

    • ISSN
      1346-4280, 1880-9952
    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] My research life in Japan2024

    • Author(s)
      Carreras Joaquim
    • Organizer
      第113回日本病理学会総会
    • Related Report
      2023 Research-status Report
    • Invited
  • [Presentation] Gene expression and mutational profile of PD-L1 positive diffuse large B-cel l lymphoma2024

    • Author(s)
      Carreras Joaquim
    • Organizer
      第113回日本病理学会総会
    • Related Report
      2023 Research-status Report
  • [Presentation] High Expression of Caspase-8 Associated with Improved Survival in Diffuse Large B-Cell Lymphoma2023

    • Author(s)
      Carreras Joaquim
    • Organizer
      第112回日本病理学会総会
    • Related Report
      2023 Research-status Report
  • [Presentation] P-44. High PD-L1 expression correlated with poor prognosis of diffuse large B-cell lymphoma2023

    • Author(s)
      Carreras Joaquim
    • Organizer
      第63回日本リンパ網内系学会学術集会・総会
    • Related Report
      2023 Research-status Report
  • [Presentation] P-66. Surface CD3陰性Monomorphic epitheliotropic intestinal T-cell lymphoma 3例の遺伝子変異解析2023

    • Author(s)
      冨田さくら, Joaquim Carreras, 菊池イアーラ幸江, 堂本英治, Edoardo Missiaglia, Justine Bouilly, Andrey Leourneau, Laurence de Leval
    • Organizer
      第63回日本リンパ網内系学会学術集会・総会
    • Related Report
      2023 Research-status Report
  • [Presentation] P-68. Nodal marginal zone lymphomaの遺伝子発現解析2023

    • Author(s)
      生駒悠, Carreras Joaquim, 菊池イアーラ幸江, 中村直哉
    • Organizer
      第63回日本リンパ網内系学会学術集会・総会
    • Related Report
      2023 Research-status Report
  • [Remarks] Research Activities of Joaquim Carreras

    • URL

      http://carreras.med.u-tokai.ac.jp/

    • Related Report
      2023 Research-status Report
  • [Remarks] ORCID

    • URL

      https://orcid.org/0000-0002-6129-8299

    • Related Report
      2023 Research-status Report
  • [Remarks] Researchgate of Joaquim Carreras

    • URL

      https://www.researchgate.net/profile/Joaquim-Carreras

    • Related Report
      2023 Research-status Report
  • [Remarks] Loop Joaquim Carreras

    • URL

      https://loop.frontiersin.org/people/956781/publications

    • Related Report
      2023 Research-status Report
  • [Remarks] Scilit Joaquim Carreras

    • URL

      https://www.scilit.net/scholars/9538763

    • Related Report
      2023 Research-status Report

URL: 

Published: 2023-04-13   Modified: 2024-12-25  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi