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An atypical microtubule generation mechanism for neurons drives dendrite and axon development and regeneration

Research Project

Project/Area Number 23K21316
Project/Area Number (Other) 21H02496 (2021-2023)
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeMulti-year Fund (2024)
Single-year Grants (2021-2023)
Section一般
Review Section Basic Section 44020:Developmental biology-related
Research InstitutionInstitute of Physical and Chemical Research

Principal Investigator

Moore Adrian  国立研究開発法人理化学研究所, 脳神経科学研究センター, チームリーダー (30442932)

Project Period (FY) 2021-04-01 – 2025-03-31
Project Status Granted (Fiscal Year 2024)
Budget Amount *help
¥17,160,000 (Direct Cost: ¥13,200,000、Indirect Cost: ¥3,960,000)
Fiscal Year 2024: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2023: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2022: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2021: ¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
KeywordsDendrite / Microtubule nucleation / microtubule / neurons / differentiation / regeneration / neuron / dendrite / axon / neurom / software / differentitaion / neuron differentiation / neuron regeneration
Outline of Research at the Start

We expect that Pfn4 is present at the local center where microtubules are generated during dendrite arbor differentiation. It amplifies microtubule generation at these sites. We plan to investigate the localization of Pfn4 in the developing dendrite arbor. We will use in vivo imaging and develop new machine learning-based computer vision techniques to link the appearance of final arbor wiring features to the output of earlier local cytoskeletal organization events.

Outline of Annual Research Achievements

We are defining the cellular and molecular nature of microtubule generation mechanisms in neurons. Then, we will examine the functional significance of these mechanisms in arbor differentiation, connectivity, and plasticity. Disrupted microtubule regulation occurs in many neurological diseases, and new microtubule growth promotes neuron regeneration. Discovering specialized neuronal mechanisms for microtubule generation is one approach to providing unique drug targets for manipulating neuron differentiation and regeneration.

Current Status of Research Progress
Current Status of Research Progress

3: Progress in research has been slightly delayed.

Reason

We have examined Sonorin localization in the developing dendrite arbor. We examined the function of Sonorin in local control of microtubule generation using the same approaches as our previous studies. We have developed in vivo imaging with machine learning-based computer vision techniques to link the appearance of final arbor wiring features to the output of earlier local cytoskeletal organization events. We use synthetic images that mimic our imaging parameters to replace limited traditional manually annotated training datasets. This new approach dramatically advances our ability to segment our imaging data automatically. These new tools will make long-term, multi-measurement quantitative sequencing of live arbor differentiation a new standard for the field.

Strategy for Future Research Activity

We will use in vivo time-lapse tracking and EB1::GFP comet tracks, which bind the continuously expanding and retracting MT plus ends. Furthermore, MT nucleation plays a pivotal role in modulating post-injury neuron protection and regeneration. After neuron injury, MT nucleation activity significantly increases to promote the production of dynamic MTs throughout the neuron, this increase in dynamic MTs assists the injured neuron against injury-induced degradation and promotes neuron regeneration. Does Sonorin-mediated MT generation play a part in this process? I will investigate the function of Sonorin in a cellular context by inducing neuron damage to trigger a rapid upregulation of MT generation in the post-mitotic neurons and examine its role in injury-induced degeneration protection.

Report

(3 results)
  • 2023 Annual Research Report
  • 2022 Annual Research Report
  • 2021 Annual Research Report
  • Research Products

    (9 results)

All 2024 2023

All Journal Article (7 results) (of which Int'l Joint Research: 7 results,  Peer Reviewed: 7 results) Presentation (2 results) (of which Int'l Joint Research: 2 results,  Invited: 2 results)

  • [Journal Article] Multi-scale Stochastic Generation of Labelled Microscopy Images for Neuron Segmentation2024

    • Author(s)
      Meghane Decroocq, Binbin Xu, Katherine L Thompson-Peer, Adrian Moore, Henrik Skibbe
    • Journal Title

      Proceedings of Machine Learning Research

      Volume: NA Pages: 1-15

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Study of Dendrite Differentiation Using Drosophila Dendritic Arborization Neurons.2023

    • Author(s)
      Tann, Jason Y Xu, Fangke Kimura, Minami Wilkes, Oliver R Yoong, Li-Foong Skibbe, Henrik Moore, Adrian W.
    • Journal Title

      Cold Spring Harbor Protocols

      Volume: NA Issue: 12 Pages: 1-13

    • DOI

      10.1101/pdb.top108146

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Culture of Larval and Pupal Drosophila Dendritic Arborization Neurons2023

    • Author(s)
      Tann, Jason Y Xu, Fangke Yoong, Li-foong Moore, Adrian W
    • Journal Title

      Cold Spring Harbor Protocols

      Volume: NA Issue: 12 Pages: 1-11

    • DOI

      10.1101/pdb.prot108150

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Mosaic Analysis with a Repressible Cell Marker (MARCM) Clone Generation in Drosophila Dendritic Arborization Neurons.2023

    • Author(s)
      Tann, Jason Y Xu, Fangke Kimura, Minami Moore, Adrian W
    • Journal Title

      Cold Spring Harbor Protocols

      Volume: NA Issue: 12 Pages: 1-5

    • DOI

      10.1101/pdb.prot108147

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Mounting of Embryos, Larvae, and Pupae for Live Drosophila Dendritic Arborization Neuron Imaging.2023

    • Author(s)
      Xu, Fangke Tann, Jason Y Wilkes, Oliver R Kimura, Minami Yoong, Li-foong Moore, Adrian W
    • Journal Title

      Cold Spring Harbor Protocols

      Volume: NA Issue: 12 Pages: 1-13

    • DOI

      10.1101/pdb.prot108149

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Filleting and Immunostaining of Larvae to Visualize Drosophila Dendritic Arborization Neuron Dendrite Arbors.2023

    • Author(s)
      Xu, Fangke Tann, Jason Y Wilkes, Oliver R Moore, Adrian W
    • Journal Title

      Cold Spring Harbor Protocols

      Volume: NA Issue: 12 Pages: 1-8

    • DOI

      10.1101/pdb.prot108148

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Use of DeTerm for Automated Drosophila Dendrite Arbor Terminal Counts.2023

    • Author(s)
      Kimura, Minami Tann, Jason Y Wilkes, Oliver R Xu, Fangke Skibbe, Henrik Moore, Adrian W
    • Journal Title

      Cold Spring Harbor Protocols

      Volume: NA Issue: 12 Pages: 1-7

    • DOI

      10.1101/pdb.prot108151

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] Control over dendrite arbor morphogenesis2024

    • Author(s)
      Adrian Moore
    • Organizer
      3rd Asia Pacific Drosophila Neurobiology Conference, Tokyo, JPN
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Control over dendrite arbor morphogenesis2023

    • Author(s)
      Adrian Moore
    • Organizer
      6th Asia Pacific Drosophila Research Conference, Cairns, AUS
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research / Invited

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Published: 2021-04-28   Modified: 2024-12-25  

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