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Impacts of Species-dependent Long Non-coding RNA Expression on Formation of Phenotypic Diversity in Mammalian Cerebral Cortex

Research Project

Project/Area Number 23KJ1627
Research Category

Grant-in-Aid for JSPS Fellows

Allocation TypeMulti-year Fund
Section国内
Review Section Basic Section 42030:Animal life science-related
Research InstitutionHiroshima University

Principal Investigator

AN Boyang  広島大学, 統合生命科学研究科, 特別研究員(DC2)

Project Period (FY) 2023-04-25 – 2025-03-31
Project Status Granted (Fiscal Year 2023)
Budget Amount *help
¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 2024: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2023: ¥1,000,000 (Direct Cost: ¥1,000,000)
Keywordscortical development / neural progenitor cells / proliferation
Outline of Research at the Start

Expansion of the brain neocortex distinguishes human from other animals. A set of human-specific genes have been proven to promote cortical expansion. Since cortical expansion emerges progressively during evolution, certain conserved genes should also be involved in this process by finely tuning their expression levels. I hypothesize that species-specific non-coding RNAs regulate cell-type-dependent transcription levels of conserved neighboring genes. In particular, I will focus on evaluating the biological significance of human-specific promoter non-coding RNAs regulating cortical expansion.

Outline of Annual Research Achievements

Using public RNA-seq data, candidate genes that are highly expressed in human neural progenitor cells (NPCs) compared with mouse were screened, and human-specific pancRNAs were found near the promoters of these genes. Finally the most interesting gene TMEM25 was identified. knockdown of TMEM25 significantly inhibited human NPC proliferation. Furthermore, when TMEM25 was overexpressed in mouse brain using electroporation, it promoted the generation of basal radial glia in the human subventricular zone to increase the number of upper layer neurons in vivo. Conversely, knockdown of TMEM25 in human NPCs compromised the effects of extracellular signals, resulting in cell cycle inhibition through Akt repression, as revealed by RNA-seq analysis and pharmacological assays (FEBS letters, 2023).

Current Status of Research Progress
Current Status of Research Progress

2: Research has progressed on the whole more than it was originally planned.

Reason

According to the research plan, I will screen out several important pancRNA-partnered genes that can affect cortical development. In the last year, I have elucidated the mechanism of TMEM25 regulating cortical expansion and successfully published it in FEBS letters. Thus, this research is progressing smoothly.

Strategy for Future Research Activity

In the future, I will elucidate the mechanism by which another important gene X affects the cortical development. I have found that it promoted the proliferation of basal progenitors and produced a sulcus gyrus-like structure in the mouse cortex. Because gene X is associated with exosome, I speculated that gene X affects neurogenesis by regulating exosomes. To test this hypothesis, I will extract exosome secreted from normal human NPCs and gene X-overexpressing NPCs to analyze the difference of miRNA profile and proteome to elucidate the molecular mechanism of gene X affecting neurogenesis.

Report

(1 results)
  • 2023 Research-status Report
  • Research Products

    (2 results)

All 2023

All Journal Article (1 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (1 results)

  • [Journal Article] Human‐biased TMEM25 expression promotes expansion of neural progenitor cells to alter cortical structure in the developing brain2023

    • Author(s)
      An Boyang、Ando Akari、Akuta Hiroto、Morishita Fumihiro、Imamura Takuya
    • Journal Title

      FEBS Letters

      Volume: 597 Issue: 21 Pages: 2611-2625

    • DOI

      10.1002/1873-3468.14756

    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] TMEM25 promotes generation of basal neural progenitors to alter cortical structure in a human-specific manner2023

    • Author(s)
      Boyang An, Akari Ando, Hiroto Akuta, Fumihiro Morishita, Takuya Imamura
    • Organizer
      日本分子生物学会
    • Related Report
      2023 Research-status Report

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Published: 2023-04-26   Modified: 2024-12-25  

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