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Molecular-scale functional visualization of bio- and nano-materials by AFM functional probes

Research Project

Project/Area Number 24221008
Research Category

Grant-in-Aid for Scientific Research (S)

Allocation TypeSingle-year Grants
Research Field Nanomaterials/Nanobioscience
Research InstitutionKyoto University

Principal Investigator

YAMADA Hirofumi  京都大学, 工学研究科, 教授 (40283626)

Co-Investigator(Kenkyū-buntansha) 小林 圭  京都大学, 白眉センター, 特定准教授 (40335211)
平田 芳樹  国立研究開発法人産業技術総合研究所, その他部局等, 研究員 (10357858)
野田 啓  京都大学, 工学(系)研究科(研究院), 助教 (30372569)
Co-Investigator(Renkei-kenkyūsha) HIZUME Kohji  国立遺伝学研究所, 細胞遺伝研究系, 助教 (10378846)
Project Period (FY) 2012-05-31 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥187,590,000 (Direct Cost: ¥144,300,000、Indirect Cost: ¥43,290,000)
Fiscal Year 2016: ¥26,000,000 (Direct Cost: ¥20,000,000、Indirect Cost: ¥6,000,000)
Fiscal Year 2015: ¥30,550,000 (Direct Cost: ¥23,500,000、Indirect Cost: ¥7,050,000)
Fiscal Year 2014: ¥41,470,000 (Direct Cost: ¥31,900,000、Indirect Cost: ¥9,570,000)
Fiscal Year 2013: ¥41,470,000 (Direct Cost: ¥31,900,000、Indirect Cost: ¥9,570,000)
Fiscal Year 2012: ¥48,100,000 (Direct Cost: ¥37,000,000、Indirect Cost: ¥11,100,000)
Keywordsナノ計測 / 原子間力顕微鏡 / 水和構造計測 / 3次元フォースマップ / 3次元フォースマップ
Outline of Final Research Achievements

Based on both high-resolution frequency modulation atomic force microscopy (AFM) and dual probe AFM techniques, working in liquids, we have successfully realized a novel method for the visualization of molecular-scale bio-functions in addition to structural imaging of biomolecules. The method allows us to directly investigate various biomolecules in a wide variety of aspects such as direct visualization of protein domains, molecular-scale identification of specific binding sites and quantitative force analysis of binding interactions. Furthermore, we succeeded in the visualization of hydration structures and local charge densities of biomolecules, which are directly related to biochemical activities.

Assessment Rating
Verification Result (Rating)

A

Assessment Rating
Result (Rating)

A: Progress in the research is steadily towards the initial goal. Expected research results are expected.

Report

(9 results)
  • 2017 Research Progress Assessment (Verification Result) ( PDF )
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report   Abstract(Research Progress Assessment) ( PDF )   Research Progress Assessment (Result) ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (105 results)

All 2017 2016 2015 2014 2013 2012 Other

All Int'l Joint Research (2 results) Journal Article (18 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 18 results,  Acknowledgement Compliant: 6 results,  Open Access: 2 results) Presentation (80 results) (of which Int'l Joint Research: 17 results,  Invited: 12 results) Remarks (4 results) Funded Workshop (1 results)

  • [Int'l Joint Research] Aalto University(Finland)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] Aalto University(フィンランド)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Direct investigations of the interface impedance of organic field-effect transistors with self-assembled-monolayer-modified electrodes2016

    • Author(s)
      T. Kimura, K. Kobayashi, H. Yamada
    • Journal Title

      Organic Electronics

      Volume: 38 Pages: 74-78

    • DOI

      10.1016/j.orgel.2016.07.038

    • NAID

      120005844269

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] F. Ito, K. Kobayashi, P. Spijker, L. Zivanovic, K. Umeda, T. Nurmi, N. Holmberg, K. Laasonen, A. S. Foster, and H. Yamada2016

    • Author(s)
      F. Ito, K. Kobayashi, P. Spijker, L. Zivanovic, K. Umeda, T. Nurmi, N. Holmberg, K. Laasonen, A. S. Foster, and H. Yamada
    • Journal Title

      The Journal of Physical Chemistry C

      Volume: 120 Issue: 35 Pages: 19714-19722

    • DOI

      10.1021/acs.jpcc.6b05651

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Visualization of subsurface nanoparticles in a polymer matrix using resonance tracking atomic force acoustic microscopy and contact resonance spectroscopy2016

    • Author(s)
      K. Kimura, K. Kobayashi, A. Yao and H. Yamada
    • Journal Title

      Nanotechnology

      Volume: 27 Issue: 41 Pages: 415707-415707

    • DOI

      10.1088/0957-4484/27/41/415707

    • NAID

      120006318850

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Visualization of trapped charges being ejected from organic thin-film transistor channels by Kelvin-probe force microscopy during gate voltage sweeps2016

    • Author(s)
      Y. Yamagishi, K. Kobayashi, K. Noda, H. Yamada
    • Journal Title

      Applied Physics Letters

      Volume: 108 Issue: 9 Pages: 093302-093302

    • DOI

      10.1063/1.4943140

    • NAID

      120005844268

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular-scale quantitative charge density measurement of biological molecule by frequency modulation atomic force microscopy in aqueous solutions2015

    • Author(s)
      Kenichi Umeda, Kei Kobayashi, Noriaki Oyabu, Kazumi Matsushige, and Hirofumi Yamada
    • Journal Title

      Nanotechnology

      Volume: 26 Issue: 28 Pages: 285103-285103

    • DOI

      10.1088/0957-4484/26/28/285103

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Local impedance measurement of an electrode/single-pentacene-grain interface by frequency-modulation scanning impedance microscopy2015

    • Author(s)
      T. Kimura, K. Kobayashi, and H. Yamada
    • Journal Title

      Journal of Applied Physics

      Volume: 118 Issue: 5 Pages: 055501-055501

    • DOI

      10.1063/1.4927921

    • NAID

      120005844267

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Atom-Resolved Analysis of an Ionic KBr(001) Crystal Surface Covered with a Thin Water Layer by Frequency Modulation Atomic Force Microscopy2015

    • Author(s)
      T. Arai, M.i Koshioka, K. Abe, M. Tomitori , R. Kokawa, M. Ohta, H. Yamada, K. Kobayashi, and N. Oyabu
    • Journal Title

      Langmuir

      Volume: 31 Issue: 13 Pages: 3876-3883

    • DOI

      10.1021/acs.langmuir.5b00087

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Practical aspects of Kelvin-probe force microscopy at solid/liquid interfaces in various liquid media2014

    • Author(s)
      K. Umeda, K. Kobayashi, N. Oyabu, Y. Hirata, K. Matsushige, and H. Yamada
    • Journal Title

      Journal of Applied Physics

      Volume: 116 Issue: 13 Pages: 134307-134307

    • DOI

      10.1063/1.4896881

    • NAID

      120005496652

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Accurate formula for dissipative interaction in frequency modulation atomic force microscopy2014

    • Author(s)
      K. Suzuki, K. Kobayashi, A. Labuda, K. Matsushige and H. Yamada
    • Journal Title

      Applied Physics Letters

      Volume: 105 Issue: 23 Pages: 233105-233105

    • DOI

      10.1063/1.4903484

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Direct Observation of the Influence of Additives on Calcite Hydration by Frequency Modulation Atomic Force Microscopy2014

    • Author(s)
      Y. Araki, K. Tsukamoto, R. Takagi, T. Miyashita, N. Oyabu, K. Kobayashi, and H. Yamada
    • Journal Title

      Crystal growth & design

      Volume: 14 Issue: 12 Pages: 6254-6260

    • DOI

      10.1021/cg500891j

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Molecular-scale investigations of structures and surface charge distribution of surfactant aggregates by three-dimensional force mapping2014

    • Author(s)
      K. Suzuki, K. Kobayashi, N. Oyabu, K. Matsushige, and H. Yamada
    • Journal Title

      The Journal of Chemical Physics

      Volume: 140 Issue: 5 Pages: 54704-54704

    • DOI

      10.1063/1.4863346

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Immunoactive two-dimensional self-assembly of monoclonal antibodies in aqueous solution revealed by atomic force microscopy2014

    • Author(s)
      S. Ido, H. Kimiya, K. Kobayashi, H. Kominami, K. Matsushige and H. Yamada
    • Journal Title

      Nature Materials

      Volume: 13 Issue: 3 Pages: 264-270

    • DOI

      10.1038/nmat3847

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Imaging of Au nanoparticles deeply buried in polymer matrix by various atomic force microscopy techniques2013

    • Author(s)
      K. Kimura, K. Kobayashi, K. Matsushige, H. Yamada
    • Journal Title

      Ultramicroscopy

      Volume: 133 Pages: 41-49

    • DOI

      10.1016/j.ultramic.2013.04.003

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Visualization of hydration layers on muscovite mica in aqueous solution by frequency-modulation atomic force microscopy2013

    • Author(s)
      K. Kobayashi, N. Oyabu, K. Kimura, S. Ido, K. Suzuki, T. Imai, K. Tagami, M. Tsukada, and H. Yamada
    • Journal Title

      The Journal of Chemical Physics

      Volume: 138 Issue: 18 Pages: 184704-184704

    • DOI

      10.1063/1.4803742

    • NAID

      120005439693

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Analysis of capacitive force acting on a cantilever tip at solid/liquid interfaces2013

    • Author(s)
      K.-I. Umeda, K. Kobavashi, N. Oyabu, Y. Hirata, K. Matsushige and H. Yamada
    • Journal Title

      J. Appl. Phys

      Volume: 113 Issue: 15 Pages: 154311-154311

    • DOI

      10.1063/1.4801795

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Beyond the Helix Pitch : Direct Visualization of Native DNA in Aqueous Solution2013

    • Author(s)
      S. Ido, K. Kimura, N. Oyabu, K. Kobayashi, M. Tsukada, K. Matsushige, H. Yamada
    • Journal Title

      ACS Nano

      Volume: 7(2) Issue: 2 Pages: 1817-1822

    • DOI

      10.1021/nn400071n

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Monotonic Damping in Nanoscopic Hydration Experiments2013

    • Author(s)
      A. Labuda, K. Kobayashi, K. Suzuki, H. Yamada, and P. Grutter
    • Journal Title

      Phys. Rev. Lett.

      Volume: 110 Issue: 6 Pages: 66102-66102

    • DOI

      10.1103/physrevlett.110.066102

    • NAID

      120005439729

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Direct actuation of cantilever in aqueous solutions by electrostatic force using high-frequency electric fields2012

    • Author(s)
      K. Umeda, K. Kobayashi, K. Matsushige, H. Yamada
    • Journal Title

      Applied Physics Letters

      Volume: 101 Issue: 12 Pages: 123112-123112

    • DOI

      10.1063/1.4754289

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] 液中FM-AFMによる左巻きDNAの表面電荷密度マッピング2017

    • Author(s)
      木南 裕陽、小林 圭、山田 啓文
    • Organizer
      第64回応用物理学関係連合講演会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2017-03-14
    • Related Report
      2016 Annual Research Report
  • [Presentation] DNAオリガミを用いたbiotin結合タンパク質の液中FM-AFM観察2017

    • Author(s)
      山本 悠樹、木南 裕陽、小林 圭、山田 啓文
    • Organizer
      第64回応用物理学関係連合講演会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2017-03-14
    • Related Report
      2016 Annual Research Report
  • [Presentation] ナノピペットによるstreptavidin分子注入とその2次元結晶成長観察2017

    • Author(s)
      濱田 貴裕、木南 裕陽、宮本 眞之、小林 圭、山田 啓文
    • Organizer
      第64回応用物理学関係連合講演会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2017-03-14
    • Related Report
      2016 Annual Research Report
  • [Presentation] 複数AFMモードによるstreptavidin-biotin間特異的相互作用力測定2017

    • Author(s)
      杉本 千奈、宮本 眞之、木南 裕陽、小林 圭、山田 啓文
    • Organizer
      第64回応用物理学関係連合講演会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2017-03-14
    • Related Report
      2016 Annual Research Report
  • [Presentation] マイカ上streptavidin 2次元結晶におけるpHの影響2017

    • Author(s)
      崔 子鵬、小林 圭、平田 芳樹、山田 啓文
    • Organizer
      第64回応用物理学関係連合講演会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2017-03-14
    • Related Report
      2016 Annual Research Report
  • [Presentation] Mg2+存在下におけるカルサイトの3次元水和構造評価2017

    • Author(s)
      荒木 優希、小林 圭、山田 啓文
    • Organizer
      第64回応用物理学関係連合講演会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2017-03-14
    • Related Report
      2016 Annual Research Report
  • [Presentation] High-resolution imaging of different DNA conformations by FM-AFM2016

    • Author(s)
      H. Kominami, K. Kobayashi and H. Yamada
    • Organizer
      24th International Colloquium on Scanning Probe Microscopy
    • Place of Presentation
      Honolulu, USA
    • Year and Date
      2016-12-14
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Mg2+ effect on 3D Water Distribution of Calcite Surface2016

    • Author(s)
      Y. Araki, K. Kobayashi and H. Yamada
    • Organizer
      24th International Colloquium on Scanning Probe Microscopy
    • Place of Presentation
      Honolulu, USA
    • Year and Date
      2016-12-14
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 生体分子認識・分子揺らぎ計測の現状と展開2016

    • Author(s)
      山田 啓文
    • Organizer
      日本顕微鏡学会走査型プローブ顕微鏡分科会
    • Place of Presentation
      湯沢ニューオータニホテル(新潟県南魚沼郡湯沢町)
    • Year and Date
      2016-11-13
    • Related Report
      2016 Annual Research Report
  • [Presentation] 濃度溶液中におけるStreptavidin 2次元結晶の液中FM-AFM高分解能構造観察(2)2016

    • Author(s)
      崔 子鵬、小林 圭、平田 芳樹、山田 啓文
    • Organizer
      第77回応用物理学関係連合講演会
    • Place of Presentation
      朱鷺メッセ(新潟県新潟市)
    • Year and Date
      2016-09-13
    • Related Report
      2016 Annual Research Report
  • [Presentation] 液中 FM-AFM による DNA上における 3次元フォースマッピング2016

    • Author(s)
      木南 裕陽、小林 圭、山田 啓文
    • Organizer
      第77回応用物理学関係連合講演会
    • Place of Presentation
      朱鷺メッセ(新潟県新潟市)
    • Year and Date
      2016-09-13
    • Related Report
      2016 Annual Research Report
  • [Presentation] FM-AFMによる層状ケイ酸塩鉱物表面のイオ ン交換に伴う水和構造変化の3次元イメージング2016

    • Author(s)
      荒木 優希、佐藤 久夫、大西 洋、小林 圭、山田 啓文
    • Organizer
      第77回応用物理学関係連合講演会
    • Place of Presentation
      朱鷺メッセ(新潟県新潟市)
    • Year and Date
      2016-09-13
    • Related Report
      2016 Annual Research Report
  • [Presentation] 液中AFMを用いたstreptavidin 2次元結晶の構造変化のその場観察2016

    • Author(s)
      濱田 貴裕、木南 裕陽、宮本 眞之、小林 圭、山田 啓文
    • Organizer
      第77回応用物理学関係連合講演会
    • Place of Presentation
      朱鷺メッセ(新潟県新潟市)
    • Year and Date
      2016-09-13
    • Related Report
      2016 Annual Research Report
  • [Presentation] 液中FM-AFMによるDNAオリガミの構造・物性評価2016

    • Author(s)
      山本 悠樹、木南 裕陽、小林 圭、山田 啓文
    • Organizer
      第77回応用物理学関係連合講演会
    • Place of Presentation
      朱鷺メッセ(新潟県新潟市)
    • Year and Date
      2016-09-13
    • Related Report
      2016 Annual Research Report
  • [Presentation] Molecular-scale Investigations of Solid-Liquid Interfaces by Frequency Modulation Atomic Force Microscopy2016

    • Author(s)
      H. Yamada
    • Organizer
      The 16th European Microscopy Congress (EMC 2016)
    • Place of Presentation
      Lyon, France
    • Year and Date
      2016-08-28
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Local hydration structure measurements of DNA molecules by 3D force mapping using frequency-modulation AFM in liquids2016

    • Author(s)
      H. Kominami, K. Kobayashi, H. Yamada
    • Organizer
      The 19th International Conference on Non-Contact Atomic Force Microscopy (NC-AFM2016)
    • Place of Presentation
      Nottingham, UK
    • Year and Date
      2016-07-25
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Molecular-scale imaging of two-dimensional streptavidin crystals in solution by FM-AFM2016

    • Author(s)
      M. Miyamoto, H. kominami, K. Kobayashi, H.Yamada
    • Organizer
      The 19th International Conference on Non-Contact Atomic Force Microscopy (NC-AFM2016)
    • Place of Presentation
      Nottingham, UK
    • Year and Date
      2016-07-25
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Mg concentration dependence of calcite hydration structure2016

    • Author(s)
      Y. Araki, H. Onishi, K. Kobayashi, H. Yamada
    • Organizer
      The 19th International Conference on Non-Contact Atomic Force Microscopy (NC-AFM2016)
    • Place of Presentation
      Nottingham, UK
    • Year and Date
      2016-07-25
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] “3D visualization of hydration structures on plasmid DNA by using frequency modulation AFM in liquids2016

    • Author(s)
      H. Kominami, K. Kobayashi, H. Yamada
    • Organizer
      International Scanning Probe Microscopy Conference (ISPM2015)
    • Place of Presentation
      Grindelwald, Switzerland
    • Year and Date
      2016-06-12
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 液中 FM-AFM による plasmid DNA のナノスケール水和構造計測2016

    • Author(s)
      木南 裕陽, 小林 圭, 山田 啓文
    • Organizer
      第63回応用物理学会春季学術講演会
    • Place of Presentation
      東京
    • Year and Date
      2016-03-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] 液中FM-AFMによるDNAオリガミにおけるcrossover構造評価 (2)2016

    • Author(s)
      黄 雲飛, 馬 志鵬, 木南 裕陽, 小林 圭, 山田 啓文, 田畑 修
    • Organizer
      第63回応用物理学会春季学術講演会
    • Place of Presentation
      東京
    • Year and Date
      2016-03-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] 3D-FM-AFMを用いた固液界面における局所水和構造と表面原子構造との相関に関する研究2016

    • Author(s)
      梅田 健一, 小林 圭, 山田 啓文
    • Organizer
      第63回応用物理学会春季学術講演会
    • Place of Presentation
      東京
    • Year and Date
      2016-03-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] Visualization of subsurface structures by scanning thermal noise microscopy2015

    • Author(s)
      A. Yao, K. Kobayashi, K. Kimura, H. Yamada
    • Organizer
      23rd International Colloquium on Scanning Probe Microscopy
    • Place of Presentation
      Niseko, Japan
    • Year and Date
      2015-12-10
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 生体分子近傍の水和構造・電荷分布の可視化 ーFM-AFMフォースマッピング法の新たな展開ー2015

    • Author(s)
      山田 啓文, 小林 圭
    • Organizer
      日本顕微鏡学会走査型プローブ顕微鏡分科会「SPMによる高速走査の可能性と応用」
    • Place of Presentation
      越後湯沢
    • Year and Date
      2015-12-06
    • Related Report
      2015 Annual Research Report
  • [Presentation] Molecular-Scale Investigations of Solid-Liquid Interfaces by Frequency Modulation Atomic Force Microscopy2015

    • Author(s)
      H. Yamada
    • Organizer
      10th International Symposium on Atomic Level Characterizations for New Materials and Devices’ 15 (ALC’ 15)
    • Place of Presentation
      Matsue, Japan
    • Year and Date
      2015-10-25
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Subsurface Visualization of Soft Matrix using 3D-Spectroscopic Atomic Force Acoustic Microscopy2015

    • Author(s)
      K. Kimura, K. Kobayashi, A. Yao, H. Yamada
    • Organizer
      AVS 62nd International Symposium & Exhibition
    • Place of Presentation
      San Jose, USA
    • Year and Date
      2015-10-18
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 3次元フォースマッピングによるSteptavidin 2次元結晶の水和構造観察2015

    • Author(s)
      宮本 眞之, 木南 裕陽, 小林 圭, 山田 啓文
    • Organizer
      第76回応用物理学会秋季学術講演会
    • Place of Presentation
      名古屋
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] B-Z 転移を含む DNA の液中 FM-AFM 高分解能観察2015

    • Author(s)
      木南 裕陽, 小林 圭, 山田 啓文
    • Organizer
      第76回応用物理学会秋季学術講演会
    • Place of Presentation
      名古屋
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] 液中 FM-AFM による DNA オリガミにおける crossover 構造評価2015

    • Author(s)
      黄 雲飛, 馬 志鵬, 木南 裕陽, 小林 圭, 山田 啓文, 田畑 修
    • Organizer
      第76回応用物理学会秋季学術講演会
    • Place of Presentation
      名古屋
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] 3次元スペクトル-原子間力超音波顕微鏡による表面下構造の可視化2015

    • Author(s)
      木村 邦子, 小林 圭, 八尾 惇, 山田 啓文
    • Organizer
      第76回応用物理学会秋季学術講演会
    • Place of Presentation
      名古屋
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] Molecular-scale analysis of hydration structures on heterogeneous surfaces by three-dimensional force mapping2015

    • Author(s)
      K. Umeda, K. Kobayashi, H. Yamada
    • Organizer
      The 18th International Conference on Non-Contact Atomic Force Microscopy
    • Place of Presentation
      Cassis, France
    • Year and Date
      2015-09-07
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Intramolecular structure imaging and orientation manipulation ofendohedral metallofullerenes using room-temperature FM-AFM2015

    • Author(s)
      K. Kobayashi, A. Noda, T. Yamashita, and H. Yamada
    • Organizer
      The 18th International Conference on Non-Contact Atomic Force Microscopy
    • Place of Presentation
      Cassis, France
    • Year and Date
      2015-09-07
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Molecular-scale visualization of different DNA conformations by using FM-AFM2015

    • Author(s)
      H. Kominami, K. Kobayashi, H. Yamada
    • Organizer
      The 18th International Conference on Non-Contact Atomic Force Microscopy
    • Place of Presentation
      Cassis, France
    • Year and Date
      2015-09-07
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Molecular-scale visualization of hydration structures at solid-liquid interfaces by frequency modulation atomic force microscopy2015

    • Author(s)
      H. Yamada
    • Organizer
      3rd International Symposium on Application of Nano-Geosciences in Petroleum Engineering
    • Place of Presentation
      Kyoto, Japan
    • Year and Date
      2015-09-04
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular-scale Visualization of Solid-Liquid Interfaces by Frequency Modulation Atomic Force Microscopy2015

    • Author(s)
      H. Yamada
    • Organizer
      NIMS Conference 2015
    • Place of Presentation
      Tsukuba, Japan
    • Year and Date
      2015-07-14
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Relationship between surface structures/charges and local hydration structures studied by 3D-liquid-FM-AFM2015

    • Author(s)
      K. Umeda, K. Kobayashi and H. Yamada
    • Organizer
      International Scanning Probe Microscopy Conference (ISPM2015)
    • Place of Presentation
      Rio De Janeiro, Brazil
    • Year and Date
      2015-06-21
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Visualization of biomolecules-solution interfaces by frequency modulation AFM and 3D force mapping2015

    • Author(s)
      H. Kominami, K. Kobayashi and H. Yamada
    • Organizer
      International Scanning Probe Microscopy Conference (ISPM2015)
    • Place of Presentation
      Rio De Janeiro, Brazil
    • Year and Date
      2015-06-21
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] マイカ基板上に形成されるStreptavidin 2次元結晶の液中FM-AFM高分解能構造観察2015

    • Author(s)
      崔 子鵬、宮本 眞之、木南 裕陽、小林 圭、平田 芳樹、山田 啓文
    • Organizer
      第62回応用物理学関係連合講演会
    • Place of Presentation
      東海大学, 神奈川
    • Year and Date
      2015-03-14
    • Related Report
      2014 Annual Research Report
  • [Presentation] FM-AFMによる界面活性剤分子集合体構造の形成過程評価 (3)2015

    • Author(s)
      鈴木 一博、小林 圭、山田 啓文
    • Organizer
      第62回応用物理学関係連合講演会
    • Place of Presentation
      東海大学, 神奈川
    • Year and Date
      2015-03-14
    • Related Report
      2014 Annual Research Report
  • [Presentation] 液中動作FM-AFMを用いたイオン液体の局所溶媒和構造と表面構造/電荷との相関に関する研究2015

    • Author(s)
      梅田 健一、小林 圭、山田 啓文
    • Organizer
      第62回応用物理学関係連合講演会
    • Place of Presentation
      東海大学, 神奈川
    • Year and Date
      2015-03-14
    • Related Report
      2014 Annual Research Report
  • [Presentation] 液中FM-AFMによる免疫グロブリンM(IgM)の抗原結合評価2015

    • Author(s)
      黄 雲飛、木南 裕陽、小林 圭、山田 啓文
    • Organizer
      第62回応用物理学関係連合講演会
    • Place of Presentation
      東海大学, 神奈川
    • Year and Date
      2015-03-13
    • Related Report
      2014 Annual Research Report
  • [Presentation] FM-AFMおよび3次元フォースマッピング法による生体分子-溶液界面構造の可視化2015

    • Author(s)
      山田 啓文、小林 圭
    • Organizer
      第62回応用物理学関係連合講演会
    • Place of Presentation
      東海大学, 神奈川
    • Year and Date
      2015-03-12
    • Related Report
      2014 Annual Research Report
  • [Presentation] 液中FM-AFMによる左巻きDNAの高分解能観察2015

    • Author(s)
      木南 裕陽、小林 圭、山田 啓文
    • Organizer
      第62回応用物理学関係連合講演会
    • Place of Presentation
      東海大学, 神奈川
    • Year and Date
      2015-03-11
    • Related Report
      2014 Annual Research Report
  • [Presentation] FM-AFMによるStreptavidin 2次元結晶の液中高分解能観察2015

    • Author(s)
      宮本 眞之、木南 裕陽、崔 子鵬、小林 圭、山田 啓文
    • Organizer
      第62回応用物理学関係連合講演会
    • Place of Presentation
      東海大学, 神奈川
    • Year and Date
      2015-03-11
    • Related Report
      2014 Annual Research Report
  • [Presentation] Molecular-scale visualization of self-assembly of biomolecules by frequency modulation atomic force microscopy in liquids2015

    • Author(s)
      H. Yamada
    • Organizer
      The XVII Linz Winter Workshop 2015
    • Place of Presentation
      Linz, Austria
    • Year and Date
      2015-01-31 – 2015-02-02
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Molecular-scale visialozation of DNA strands with non-B DNA conformations using FM-AFM in liquids2014

    • Author(s)
      H. Kominami, K. Kobayashi, H. Yamada
    • Organizer
      22nd International Colloquium on Scanning Probe Microscopy
    • Place of Presentation
      Atagawa, Japan
    • Year and Date
      2014-12-11 – 2014-12-13
    • Related Report
      2014 Annual Research Report
  • [Presentation] High-resolution Imaging of IgM Antibody Molecules by FM-AFM in Aqueous Solutions2014

    • Author(s)
      Y. Huang, H. Kominami, K. Kobayashi and H. Yamada
    • Organizer
      The 7th International Symposium on Surface Science
    • Place of Presentation
      Matsue, Japan
    • Year and Date
      2014-11-03 – 2014-11-07
    • Related Report
      2014 Annual Research Report
  • [Presentation] Relationship between surface structures/charges and local hydration structures studied by FM-AFM in liquids2014

    • Author(s)
      K. Umeda, K. Kobayashi and H. Yamada
    • Organizer
      The 7th International Symposium on Surface Science
    • Place of Presentation
      Matsue, Japan
    • Year and Date
      2014-11-03 – 2014-11-07
    • Related Report
      2014 Annual Research Report
  • [Presentation] 液中動作 FM-AFM による真核生物 DNA 複製の初期過程イメージング2014

    • Author(s)
      木南 裕陽, 日詰 光治, 荒木 弘之, 小林 圭, 山田 啓文
    • Organizer
      第75回応用物理学関係連合講演会
    • Place of Presentation
      北海道大学, 札幌
    • Year and Date
      2014-09-20
    • Related Report
      2014 Annual Research Report
  • [Presentation] 液中動作 FM-AFM による IgG 抗体分子 6 量体形成の抗体種依存性2014

    • Author(s)
      木南 裕陽, 井戸 慎一郎, 小林 圭, 山田 啓文
    • Organizer
      第75回応用物理学関係連合講演会
    • Place of Presentation
      北海道大学, 札幌
    • Year and Date
      2014-09-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] 液中FM-AFMによる免疫グロブリンM(IgM)構造評価2014

    • Author(s)
      黄 雲飛, 木南 裕陽, 小林 圭, 山田 啓文
    • Organizer
      第75回応用物理学関係連合講演会
    • Place of Presentation
      北海道大学, 札幌
    • Year and Date
      2014-09-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] Avidin-biotin 相互作用のFM-AFM フォースマップ評価2014

    • Author(s)
      李 文尭, 鈴木 一博, 小林 圭, 山田 啓文
    • Organizer
      第75回応用物理学関係連合講演会
    • Place of Presentation
      北海道大学, 札幌
    • Year and Date
      2014-09-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] 液中動作FM-AFMを用いた局所水和構造と表面構造/電荷の相関に関する研究(2)2014

    • Author(s)
      梅田 健一, 小林 圭, 山田 啓文
    • Organizer
      第75回応用物理学関係連合講演会
    • Place of Presentation
      北海道大学, 札幌
    • Year and Date
      2014-09-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] バイオセンシングに向けた機能性タンパク質のFM-AFM構造観察2014

    • Author(s)
      崔 子鵬, 木南 裕陽, 小林 圭, 平田 芳樹, 山田 啓文
    • Organizer
      第75回応用物理学関係連合講演会
    • Place of Presentation
      北海道大学, 札幌
    • Year and Date
      2014-09-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] Relationship between local hydration structures and surface structures/charges studied by liquid-FMAFM2014

    • Author(s)
      K. Umeda, K. Kobayashi, H. Yamada
    • Organizer
      The 17th International Conference on Non-Contact Atomic Force Microscopy
    • Place of Presentation
      Tsukuba, Japan
    • Year and Date
      2014-08-04 – 2014-08-08
    • Related Report
      2014 Annual Research Report
  • [Presentation] Molecular-scale Investigation of Antigen Binding to IgG Antibody Self-Assembly Using Frequency-Modulation AFM in Liquids2014

    • Author(s)
      H. Kominami, S. Ido, K. Kobayashi, H. Yamada
    • Organizer
      International Conference on Nanoscience and Technology
    • Place of Presentation
      Colorado, USA
    • Year and Date
      2014-07-20 – 2014-07-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] Molecular-scale Investigations of Solid-Liquid Interfaces by both FM-AFM and 3-Dimensional Force Mapping Method2014

    • Author(s)
      H. Yamada
    • Organizer
      XXI International Summer School “Nicolas Cabrera”
    • Place of Presentation
      Madrid, Spain
    • Year and Date
      2014-07-14 – 2014-07-18
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Molecular-scale visualization of biomolecules and their biochemical functions by frequency modulation atomic force microscopy2014

    • Author(s)
      H. Yamada, H. Kominami, K. Umeda, H. Suzuki, K. Kobayashi
    • Organizer
      5th Multifrequency AFM Conference
    • Place of Presentation
      Madrid, Spain
    • Year and Date
      2014-06-16 – 2014-06-18
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Exploring the Solid-Liquid Interfaces by Two-Dimensional and Three-Dimensional Force Mapping Techniques with Frequency Modulation Atomic Force Microscopy2013

    • Author(s)
      K. Kobayashi, H. Yamada
    • Organizer
      2013 Materials Research Society Fall Meeting
    • Place of Presentation
      Hynes Convention Center(Boston, USA)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Immunoactivity of IgG Antibody Assembly Investigated by FM-AFM2013

    • Author(s)
      H. Kominami, S. Ido, H. Kimiya, K. Kobayashi, H. Yamada
    • Organizer
      21st International Colloquium on Scanning Probe Microscopy
    • Place of Presentation
      Tsukuba International Congress Center(茨城県つくば市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Molecular-scale fluctuation of surfactant micelle structures on graphite2013

    • Author(s)
      K. Suzuki, K. Kobayashi, N. Oyabu, K. Matsushige and H. Yamada
    • Organizer
      The 16th International Conference on Non-Contact Atomic Force Microscopy
    • Place of Presentation
      University of Maryland(Maryland, USA)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Molecular-Scale 3-Dimensional Visualization of Electric Double Layers on Surfactant Micelle Assemblies by Force Mapping Method2013

    • Author(s)
      H. Yamada, K. Suzuki, F. Ito, K. Umeda, K. Kobayashi
    • Organizer
      International Scanning Probe Microscopy Conference
    • Place of Presentation
      University of Bourgogne(Dijon, France)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Molecular-Scale Biological Interactions in Liquids Revealed by Frequency Modulation Atomic Force Microscopy2013

    • Author(s)
      H. Yamada
    • Organizer
      AFM BioMed Conference
    • Place of Presentation
      上海張江ハイテクパーク(上海, 中国)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Molecular-scale 3D Visualization of Solid-liquid Interfaces by Frequency Modulation Atomic Force Microscopy2013

    • Author(s)
      H. Yamada, K. Kobayashi, S. Ido, K. Umeda, K. Suzuki
    • Organizer
      2013 Materials Research Society Spring Meeting
    • Place of Presentation
      Moscone Convention Centre(San Francisco, USA)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Molecular-Scale Biological Interactions in Liquids Investigated by Atomic Force Microscopy2013

    • Author(s)
      H. Yamada
    • Organizer
      CRC International Symposium New Challenges on the Bio-interfaces: Structures and Dynamics
    • Place of Presentation
      Sapporo, Hokkaido
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Investigation of Surfactant Self-Assembly at the Interface between Aqueous Solution and Au(111) Substrate by Force Mapping Using FM-AFM2012

    • Author(s)
      F. Ito, K. Suzuki, K. Umeda, K. Kobayashi and H. Yamada
    • Organizer
      The 20th International Colloquium on Scanning Probe Microscopy
    • Place of Presentation
      Naha, Okinawa
    • Related Report
      2012 Annual Research Report
  • [Presentation] Molecular-Scale Investigations of Self-Assembled Surfactant Aggregates on Graphite by Force Mapping Using FM-AFM2012

    • Author(s)
      K. Suzuki, K. Kobayashi, K. Matsushige and H. Yamada
    • Organizer
      The 20th International Colloquium on Scanning Probe Microscopy
    • Place of Presentation
      Naha, Okinawa
    • Related Report
      2012 Annual Research Report
  • [Presentation] Comprehensive Study on the Visualization of Deeply Buried Subsurface Features in Soft Matrices Using Various AFM Techniques2012

    • Author(s)
      K. Kimura, K. Kobayashi, H. Yamada
    • Organizer
      2012 Materials Research Society Fall Meeting
    • Place of Presentation
      Boston, USA
    • Related Report
      2012 Annual Research Report
  • [Presentation] Local Electrical Injection and Transport Measurements on Diacetylene Thin Films by Dual-Probe Atomic Force Microscopy2012

    • Author(s)
      M. Hirose, K. Kobayashi and H. Yamada
    • Organizer
      International Union of Material Research Societies - International Conference on Electronic Materials
    • Place of Presentation
      Yokohama, Kanagawa
    • Related Report
      2012 Annual Research Report
  • [Presentation] Quantitative electric double layer force mapping and local charge density measurements of biological molecules by FM-AFM in aqueous solutions2012

    • Author(s)
      K. Umeda, Y. Hirata, N. Oyabu, K. Kobayashi, K. Matsushige and H. Yamada
    • Organizer
      International Conference on Nanoscience and Technology 2012
    • Place of Presentation
      Paris, France
    • Related Report
      2012 Annual Research Report
  • [Presentation] Molecular-Scale Three-Dimensional Visualization of Electric Double Layers on Anionic and Cationic Surfactant Micelle Structures2012

    • Author(s)
      K. Suzuki, K. Kobayashi, F. Ito, N. Oyabu, K. Matsushige and H. Yamada
    • Organizer
      The 15th International Conference on Non-Contact Atomic Force Microscopy
    • Place of Presentation
      Cesky Krumlov, Czech Republic
    • Related Report
      2012 Annual Research Report
  • [Presentation] Molecular-scale Investigation on Antibody-antigen Interactions in Liquids by FM-AFM2012

    • Author(s)
      S. Ido, H. Kimiya, K. Kobayashi, K. Matsushige and H. Yamada
    • Organizer
      The 15th International Conference on Non-Contact Atomic Force Microscopy
    • Place of Presentation
      Cesky Krumlov, Czech Republic
    • Related Report
      2012 Annual Research Report
  • [Presentation] 液中動作FM-AFMを用いた局所水和構造と表面構造/電荷の相関に関する研究

    • Author(s)
      梅田 健一, 小林 圭, 山田 啓文
    • Organizer
      第61回応用物理学関係連合講演会
    • Place of Presentation
      青山学院大学(神奈川県相模原市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 液中動作FM-AFMによるIgG抗体分子への抗原吸着評価

    • Author(s)
      木南 裕陽, 井戸 慎一郎, 木宮 宏和, 小林 圭, 山田 啓文
    • Organizer
      第61回応用物理学関係連合講演会
    • Place of Presentation
      青山学院大学(神奈川県相模原市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] FM-AFMの減衰係数導出法

    • Author(s)
      鈴木 一博, 小林圭, 山田 啓文
    • Organizer
      第61回応用物理学関係連合講演会
    • Place of Presentation
      青山学院大学(神奈川県相模原市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] FM-AFM による界面活性剤分子集合体構造の形成過程評価 (2)

    • Author(s)
      鈴木 一博, 小林 圭, 山田 啓文
    • Organizer
      第74回応用物理学関係連合講演会
    • Place of Presentation
      同志社大学(京都府京田辺市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Visualization of Deeply Buried Subsurface Features in Soft Matrix using AFM techniques

    • Author(s)
      K. Kimura, K. Kobayashi and H. Yamada
    • Organizer
      2013 JSAP-MRS Joint Symposia
    • Place of Presentation
      同志社大学(京都府京田辺市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 周波数変調方式 AFM を用いた IgG 抗体分子会合体の抗原認識能評価

    • Author(s)
      木南 裕陽, 井戸 慎一郎, 木宮 宏和, 小林 圭, 山田 啓文
    • Organizer
      第74回応用物理学関係連合講演会
    • Place of Presentation
      同志社大学(京都府京田辺市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Molecular-scale visualization of biomolecules and their biochemical functions by frequency modulation atomic force microscopy

    • Author(s)
      H. Yamada
    • Organizer
      3rd Kanazawa Bio-AFM Workshop
    • Place of Presentation
      Kanazawa, Ishikawa
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Quantitative Measurements of Local Charge Density at Solid / Liquid Interfaces by FM-AFM

    • Author(s)
      K. Umeda, Y. Hirata, N. Oyabu, K. Kobayashi, K. Matsushige and H. Yamada
    • Organizer
      25th International Microprocesses and Nanotechnology Conference
    • Place of Presentation
      Kobe, Hyogo
    • Related Report
      2012 Annual Research Report
  • [Remarks] 京都大学工学研究科電子材料物性研究室

    • URL

      http://piezo.kuee.kyoto-u.ac.jp/d/jp

    • Related Report
      2015 Annual Research Report
  • [Remarks]

    • URL

      https://piezo.kuee.kyoto-u.ac.jp/jp/research/bio-nanoprobe

    • Related Report
      2014 Annual Research Report
  • [Remarks] 京都大学工学研究科電子材料物性研究室

    • URL

      http://piezo.kuee.kyoto-u.ac.jp/

    • Related Report
      2013 Annual Research Report
  • [Remarks] 京都大学工学研究科電子材料物性研究室

    • URL

      http://piezo.kuee.kyoto-u.ac.jp/

    • Related Report
      2012 Annual Research Report
  • [Funded Workshop] Kyoto Workshop on Recent Progress in Advanced Scanning Probe Techniques2016

    • Place of Presentation
      Kyoto, Japan
    • Year and Date
      2016-03-10
    • Related Report
      2015 Annual Research Report

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Published: 2012-11-27   Modified: 2019-07-29  

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