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N-glycosylated glycoproteome analysis of glycosyltransferase-modified mice for comprehensive understanding of glycan functions

Research Project

Project/Area Number 24241073
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Living organism molecular science
Research InstitutionNational Institute of Advanced Industrial Science and Technology

Principal Investigator

NARIMATSU Hisashi  独立行政法人産業技術総合研究所, 糖鎖創薬技術研究センター, 招聘研究員 (40129581)

Co-Investigator(Renkei-kenkyūsha) KAJI Hiroyuki  産業技術総合研究所, 糖鎖創薬技術研究センター・標的糖鎖探索チーム, 研究チーム長 (80214302)
SATO Takashi  産業技術総合研究所, 糖鎖創薬技術研究センター・標的糖鎖探索チーム, 主任研究員 (90371046)
ANGATA Kiyohiko  産業技術総合研究所, 糖鎖創薬技術研究センター・標的糖鎖探索チーム, 招聘研究員 (00611138)
TOGAYACHI Akira  産業技術総合研究所, 糖鎖創薬技術研究センター・標的糖鎖探索チーム, 主任研究員 (60392635)
SUGAHARA Daisuke  産業技術総合研究所, 糖鎖医工学研究センター, 研究員 (00390766)
TAKAHASHI Satoru  筑波大学, 医学医療系, 教授 (50271896)
KUDO Takashi  筑波大学, 医学医療系, 准教授 (20288062)
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥47,450,000 (Direct Cost: ¥36,500,000、Indirect Cost: ¥10,950,000)
Fiscal Year 2014: ¥13,780,000 (Direct Cost: ¥10,600,000、Indirect Cost: ¥3,180,000)
Fiscal Year 2013: ¥13,520,000 (Direct Cost: ¥10,400,000、Indirect Cost: ¥3,120,000)
Fiscal Year 2012: ¥20,150,000 (Direct Cost: ¥15,500,000、Indirect Cost: ¥4,650,000)
Keywords糖鎖 / 糖タンパク質 / 糖鎖機能 / グライコプロテオミクス / N-結合型糖鎖 / 遺伝子ノックアウトマウス / 糖転移酵素 / 糖ペプチド / グライコプロテオミクス解析 / IGOT法
Outline of Final Research Achievements

Identification of glycoproteins targeted by the glycosyltransferases is indispensable to understand the functions of glycans. This study aims large-scale identification of the glycoproteins specifically targeted by the glycosyltransferases using glycosyltransferase gene-deficient mice (knockout: KO mice). The comparative analyses of the glycan carrier molecules by a glycoproteomics technology (IGOT-LC/MS method) in wild type and KO mice identified a panel of the candidate carrier proteins. Understanding of the molecular characteristics and tendency commonly found in the target glycoproteins would accelerate the elucidation of the mechanism in selective glycosylation of specific glycan structures toward specific proteins.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (48 results)

All 2014 2013 2012 Other

All Journal Article (14 results) (of which Peer Reviewed: 14 results,  Open Access: 2 results) Presentation (30 results) (of which Invited: 14 results) Book (4 results)

  • [Journal Article] Mice lacking α1,3-fucosyltransferase 9 exhibit modulation of in vivo immune responses against pathogens2014

    • Author(s)
      Kashiwazaki H, Kakizaki M, Ikehara Y, Togayachi A, Narimatsu H, Watanabe R
    • Journal Title

      Pathol Int

      Volume: 64(5) Issue: 5 Pages: 199-208

    • DOI

      10.1111/pin.12159

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] WURCS: the Web3 unique representation of carbohydrate structures.2014

    • Author(s)
      Tanaka K, Aoki-Kinoshita KF, Kotera M, Sawaki H, Tsuchiya S, Fujita N, Shikanai T, Kato M, Kawano S, Yamada I, Narimatsu H.
    • Journal Title

      J Chem Inf Model.

      Volume: 54(6) Issue: 6 Pages: 1558-66

    • DOI

      10.1021/ci400571e

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] RNAi screening of human glycogene orthologs in the nematode Caenorhabditis elegans and the construction of the C. elegans glycogene database.2014

    • Author(s)
      Akiyoshi S, Nomura KH, Dejima K, Murata D, Matsuda A, Kanaki N, Takaki T, Mihara H, Nagaishi T, Furukawa S, Ando KG, Yoshina S, Mitani S, Togayachi A, Suzuki Y, Shikanai T, Narimatsu H, Nomura K.
    • Journal Title

      Glycobiology

      Volume: 25(1) Issue: 1 Pages: 8-20

    • DOI

      10.1093/glycob/cwu080

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Differential glycan analysis of an endogenous glycoprotein: toward clinical implementation--from sample pretreatment to data standardization.2014

    • Author(s)
      Kuno A, Matsuda A, Unno S, Tan B, Hirabayashi J, Narimatsu H.
    • Journal Title

      Methods Mol Biol.

      Volume: 1200 Pages: 265-85

    • DOI

      10.1007/978-1-4939-1292-6_23

    • ISBN
      9781493912919, 9781493912926
    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Strategy for development of clinically useful glyco-biomarkers.2014

    • Author(s)
      Narimatsu H
    • Journal Title

      Glycoconj J

      Volume: 6-7 Issue: 6-7 Pages: 403-7

    • DOI

      10.1007/s10719-014-9544-8

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Glycoproteomics approach for identifying Glycobiomarker candidate molecules for tissue type classification of non-small cell lung carcinoma.2014

    • Author(s)
      Hirao Y, Matsuzaki H, Iwaki J, Kuno A, Kaji H, Ohkura T, Togayachi A, Abe M, Nomura M, Noguchi M, Ikehara Y, Narimatsu H
    • Journal Title

      J Proteome Res

      Volume: 13(11) Issue: 11 Pages: 4705-4716

    • DOI

      10.1021/pr5006668

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] GlycoRDF: an ontology to standardize glycomics data in RDF.2014

    • Author(s)
      Ranzinger R, Aoki-Kinoshita KF, Campbell MP, Kawano S, Lutteke T, Okuda S, Shinmachi D, Shikanai T, Sawaki H, Toukach P, Matsubara M, Yamada I, Narimatsu H.
    • Journal Title

      Bioinformatics

      Volume: 31(6) Issue: 6 Pages: 919-25

    • DOI

      10.1093/bioinformatics/btu732

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A heterozygous mutation of GALNTL5 affects male infertility with impairment of sperm motility2014

    • Author(s)
      Takasaki N, Tachibana K, Ogasawara S, Matsuzaki H, Hagiuda J, Ishikawa H, Mochida K, Inoue K, Ogonuki N, Ogura A, Noce T, Ito C, Toshimori K, Narimatsu H.
    • Journal Title

      Proc Natl Acad Sci USA

      Volume: 111 Issue: 3 Pages: 1120-1125

    • DOI

      10.1073/pnas.1310777111

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Regulation of cell shape and adhesion by CD34.2013

    • Author(s)
      Ohnishi H, Sasaki H, Nakamura Y, Kato S, Ando K, Narimatsu H, Tachibana K.
    • Journal Title

      Cell Adh Migr.

      Volume: 7 Issue: 5 Pages: 426-433

    • DOI

      10.4161/cam.25957

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The Lewis X-related α1,3-Fucosyltransferase, Fut10, Is Required for the Maintenance of Stem Cell Populations.2013

    • Author(s)
      Kumar A, Torii T, Ishino Y, Muraoka D, Yoshimura T, Togayachi A, Narimatsu H, Ikenaka K, Hitoshi S.
    • Journal Title

      J Biol Chem.

      Volume: 288 Issue: 40 Pages: 28859-28868

    • DOI

      10.1074/jbc.m113.469403

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Clgalt1-deficient mice exhibit thrombocytopenia due to abnormal terminal differentiation of megakaryocytes2013

    • Author(s)
      Kudo T, et al. (13人中8番目)
    • Journal Title

      Blood

      Volume: 122 Issue: 9 Pages: 1649-1657

    • DOI

      10.1182/blood-2012-12-471102

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Stable isotope labeling of N-glycosylated peptides by enzymatic deglycosylation for mass spectrometry-based glycoproteomics2013

    • Author(s)
      梶 裕之
    • Journal Title

      Methods Mol Biol."Mass Spectrometry of Glycoprroteins"

      Volume: 951 Pages: 217-227

    • DOI

      10.1007/978-1-62703-146-2_14

    • ISBN
      9781627031455, 9781627031462
    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Large-scale identification of target proteins of a glycosyltransferase isozyme by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach2012

    • Author(s)
      Sugahara, D., Kaji, H., Sugihara, K., Asano, M., and Narimatsu, H.
    • Journal Title

      Scientific Reports

      Volume: 2 Issue: 1 Pages: 680-680

    • DOI

      10.1038/srep00680

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Functional Analysis of &beta;1,3-<I>N</I>-Acetylglucosaminyltransferases and Regulation of Immunological Function by Polylactosamine2012

    • Author(s)
      栂谷内晶、成松久
    • Journal Title

      Trends in Glycoscience and Glycotechnology

      Volume: 24 Issue: 137 Pages: 95-111

    • DOI

      10.4052/tigg.24.95

    • NAID

      10030975922

    • ISSN
      0915-7352, 1883-2113
    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] 糖鎖解析による疾患バイオマーカー探索の最前線2014

    • Author(s)
      成松久
    • Organizer
      第146回日本医学会シンポジウム
    • Place of Presentation
      日本医師会館大講堂
    • Year and Date
      2014-12-18
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Comprehensive identification of glycoproteins carrying Lewis x and site-specific glycan alteration in Fut9 knockout mice.2014

    • Author(s)
      Erika Noro, Akira Togayachi, Takashi Sato, Azusa Tomioka, Mika Fujita, Masako Sukegawa, Nami Suzuki, Hiroyuki Kaji , Hisashi Narimatsu.
    • Organizer
      The 6th ACGG conference
    • Place of Presentation
      Hyderabad,India
    • Year and Date
      2014-12-12
    • Related Report
      2014 Annual Research Report
  • [Presentation] From discovery of the first mammalian glycotransferase gene to the future task.2014

    • Author(s)
      Hisashi Narimatsu
    • Organizer
      The 6th ACGG conference
    • Place of Presentation
      Hyderabad,India.
    • Year and Date
      2014-12-10
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 糖鎖科学の進捗と疾患診断への応用2014

    • Author(s)
      成松久
    • Organizer
      第 66 回日本皮膚科学会西部支部学術大会
    • Place of Presentation
      アルファあなぶきホール
    • Year and Date
      2014-11-28
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] A heterozygous mutation of glycosyltransferase-like gene causes asthenozoospermia.2014

    • Author(s)
      Hisashi Narimatsu、Nobuyoshi Takasaki
    • Organizer
      SFG & JSCR 2014 Joint Annual Meeting(Glycobiology)
    • Place of Presentation
      Honolulu, Hawaii
    • Year and Date
      2014-11-19
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] α1,3-フコース転移酵素9ノックアウトマウスを用いた糖鎖および糖タンパク質の網羅的な解析.2014

    • Author(s)
      野呂絵里花、栂谷内晶、佐藤隆、富岡あづさ、藤田弥佳、助川昌子、鈴木奈美、梶裕之、成松久
    • Organizer
      第87回日本生化学会大会
    • Place of Presentation
      国立京都国際会館
    • Year and Date
      2014-10-15 – 2014-10-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] Combination of glycoproteomics technologies utilized in successful development of diagnostic systems.2014

    • Author(s)
      Hisashi Narimatsu
    • Organizer
      HUPO 13th Annual World Congress
    • Place of Presentation
      Madrid, Spain
    • Year and Date
      2014-10-07
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Comprehensive identification of glycoproteins carrying Lewis x and site-specific glycan alteration in Fut9 knockout mice.2014

    • Author(s)
      Erika Noro, Akira Togayachi, Takashi Sato, Azusa Tomioka, Mika Fujita, Masako Sukegawa, Nami Suzuki, Hiroyuki Kaji , Hisashi Narimatsu
    • Organizer
      HUPO 13th Annual World Congress
    • Place of Presentation
      Madrid, Spain
    • Year and Date
      2014-10-05 – 2014-10-08
    • Related Report
      2014 Annual Research Report
  • [Presentation] グライコプロテオミクス2014

    • Author(s)
      成松久、梶 裕之、久野 敦
    • Organizer
      日本プロテオーム学会2014年会(JHUPO第12回大会)
    • Place of Presentation
      つくば国際会議場
    • Year and Date
      2014-07-18
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] タンパク質特異的糖鎖修飾機構解明のための特定の糖鎖を持つ糖タンパク質の大規模同定2014

    • Author(s)
      佐藤隆、梶裕之、安形清彦、成松久
    • Organizer
      日本プロテオーム学会2014年会(JHUPO第12回大会)
    • Place of Presentation
      つくば国際会議場
    • Year and Date
      2014-07-17 – 2014-07-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] 糖鎖付加位置選択的グライコーム解析技術の開発と応用2014

    • Author(s)
      梶裕之、富岡あづさ、鹿内俊秀、成松久
    • Organizer
      日本プロテオーム学会2014年会(JHUPO第12回大会)
    • Place of Presentation
      つくば国際会議場
    • Year and Date
      2014-07-17 – 2014-07-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] コア3型糖鎖キャリアータンパク質の同定2014

    • Author(s)
      杜東寧、安形清彦、久野敦、富岡あづさ、藤田弥佳、梶裕之、成松久
    • Organizer
      日本プロテオーム学会2014年会(JHUPO第12回大会)
    • Place of Presentation
      つくば国際会議場
    • Year and Date
      2014-07-17 – 2014-07-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] α1,3-フコース転移酵素9ノックアウトマウスを用いた糖鎖および糖タンパク質の網羅的な解析2014

    • Author(s)
      野呂絵里花、栂谷内晶、佐藤隆、富岡あづさ、藤田弥佳、助川昌子、鈴木奈美、梶裕之、成松久.
    • Organizer
      日本プロテオーム学会2014年会(JHUPO第12回大会)
    • Place of Presentation
      つくば国際会議場
    • Year and Date
      2014-07-17 – 2014-07-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] 分析ターゲットとしての糖鎖の可能性2014

    • Author(s)
      成松久
    • Organizer
      第64回日本電気泳動学会シンポジウム
    • Place of Presentation
      文京学院大学本郷キャンパス
    • Year and Date
      2014-06-28
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Successful cases of translational research based on the glycoanalysis technologies.2014

    • Author(s)
      Hisashi Narimatsu
    • Organizer
      GlycoT 2014
    • Place of Presentation
      Port, Portugal
    • Year and Date
      2014-06-21
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 糖鎖科学に必要とされる基盤ツールの開発と、それを応用した糖鎖バイオマーカーの開発2014

    • Author(s)
      成松久
    • Organizer
      シスメックスセミナー
    • Place of Presentation
      品川グランドコモンズ グランドホール
    • Year and Date
      2014-06-06
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Csgalnact1 is essential for normal chondrocyte layer formation.2013

    • Author(s)
      Takashi Sato, Takashi Kudo, Yuzuru Ikehara, Hirotaka Ogawa, Akira Togayachi, Masatsugu Ema, Satoru Takahashi, Koji Kimata, Hideto Watanabe Hisashi Narimatsu
    • Organizer
      日本組織培養学会(JTCA 2013)
    • Place of Presentation
      産総研共用講堂、つくば
    • Related Report
      2013 Annual Research Report
  • [Presentation] Biological function of polylactosamine chains on cell surface in immune system.2013

    • Author(s)
      Akira Togayachi, Takashi Sato, Yuzuru Ikehara, and Hisashi Narimatsu
    • Organizer
      日本組織培養学会(JTCA 2013)
    • Place of Presentation
      産総研共用講堂、つくば
    • Related Report
      2013 Annual Research Report
  • [Presentation] Systematic identification of in vivo target proteins specific for a glycosyltransferases isozyme, β1,4-galactosyltransferase-I.2013

    • Author(s)
      Sugahara D, Kaji H, Sugihara K, Asano M, Narimatsu H
    • Organizer
      22nd International Symposium on Glycoconjugates (GLYCO22)
    • Place of Presentation
      Dalian, China
    • Related Report
      2013 Annual Research Report
  • [Presentation] Large-scale identification of in vivo target proteins of glycosyltransferases by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach using knock-out mouse.2013

    • Author(s)
      Hisashi Narimatsu
    • Organizer
      22nd International Symposium on Glycoconjugates (GLYCO22)
    • Place of Presentation
      Dalian, China
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] A glycosyltransferase-related gene, Galntl5, is a functional molecule indispensable to mature sperm formation.2013

    • Author(s)
      Hisashi Narimatsu
    • Organizer
      International Symposium on Chemical Glycobiology
    • Place of Presentation
      Shanghai, China
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] ポリラクトサミン糖鎖が制御する細胞表層分子機能2013

    • Author(s)
      日本生化学会大会
    • Organizer
      日本生化学会大会
    • Place of Presentation
      パシフィコ横浜、横浜
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] An LC/MS-based glycoproteomic approach for systematic identification of in vivo target proteins specific for a glycosyltransferase isozyme,2013

    • Author(s)
      Sugahara D, Kaji H, Sugihara K, Asano M, Narimatsu H
    • Organizer
      The 12th Human Proteome Organisation World Congress (12th HUPO)
    • Place of Presentation
      パシフィコ横浜、横浜
    • Related Report
      2013 Annual Research Report
  • [Presentation] Large-scale identification of glycoproteins having LDN glycans for mechanism elucidation in protein-specific glycosylation,2013

    • Author(s)
      Sato T, Kaji H, and Narimatsu H
    • Organizer
      The 12th Human Proteome Organisation World Congress (12th HUPO)
    • Place of Presentation
      パシフィコ横浜、横浜
    • Related Report
      2013 Annual Research Report
  • [Presentation] C1galt1欠損マウスは巨核球の最終分化異常により血小板減少症を引き起こす2013

    • Author(s)
      工藤崇、佐藤隆、萩原梢、上妻行則、山口高志、池原譲、濱田理人、松本健、依馬正次、村田聡一郎、大河内信弘、成松久、高橋智
    • Organizer
      日本分子生物学会
    • Place of Presentation
      神戸ポートアイランド、神戸
    • Related Report
      2013 Annual Research Report
  • [Presentation] The 3rd Pilot study on HGPI/HUPO

    • Author(s)
      梶 裕之、成松 久
    • Organizer
      日本プロテオーム学会2012年大会
    • Place of Presentation
      東京都江東区青海 日本科学未来館
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Identification of target proteins specific for a glycosyltransferase isozyme by glycoproteomic analysis of a glyco-gene deleted model organism

    • Author(s)
      菅原大介、成松 久
    • Organizer
      International Symposium on Glyco-minded Biology of Diseases as a Basis of Pharmaceutical Sciences
    • Place of Presentation
      東京大学(文京区)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Large-scale identification of target proteins of a glycosyltransferase isozyme by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach

    • Author(s)
      菅原大介、成松 久
    • Organizer
      第85回日本生化学会大会
    • Place of Presentation
      福岡市 福岡国際会議場
    • Related Report
      2012 Annual Research Report
  • [Presentation] A glycosyltransferase-related gene, Galntl5, has a role specific to functionally mature sperm formation in mammals

    • Author(s)
      髙﨑延佳
    • Organizer
      ACGG 2012 Conference, 4thAsian Communications of Glycobiology and Glycotechnology
    • Place of Presentation
      Jeju Ialand (Korea)
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] A toxic protein to cultured cells is functional only in mammalian mature sperm formation

    • Author(s)
      髙﨑延佳、成松久
    • Organizer
      Joint Meeting of The 45th annual Meeting of the Japanese Society of Developmental Biologists & The 64th Annual Meeting of the Japan Society for Cell Biology
    • Place of Presentation
      神戸市 神戸国際会議場
    • Related Report
      2012 Annual Research Report
  • [Book] 「医学のあゆみ」プロテオミクス、グライコミクス、そしてグライコプロテオミクスの時代へ2014

    • Author(s)
      成松久
    • Publisher
      医歯薬出版「医学のあゆみ」
    • Related Report
      2014 Annual Research Report
  • [Book] Handbook of Glycosyltransferases and Related Genes. 2nd edition. (分担執筆)2013

    • Author(s)
      Kiyohiko Angata, Takashi Sato, Akira Togayachi, and Hisashi Narimatsu
    • Total Pages
      1707
    • Publisher
      Springer
    • Related Report
      2013 Annual Research Report
  • [Book] Handbook of Glycosyltransferases and Related Genes. 2nd edition. (分担執筆)2013

    • Author(s)
      Akira Togayachi and Hisashi Narimatsu
    • Total Pages
      1707
    • Publisher
      Springer
    • Related Report
      2013 Annual Research Report
  • [Book] Handbook of Glycosyltransferases and Related Genes. 2nd edition. (分担執筆)2013

    • Author(s)
      Takashi Sato and Hisashi Narimatsu
    • Total Pages
      1707
    • Publisher
      Springer
    • Related Report
      2013 Annual Research Report

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Published: 2013-05-15   Modified: 2019-07-29  

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