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Functional measurement and analysis of photosynthetic cells based on on-chip robotics

Research Project

Project/Area Number 24246045
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Intelligent mechanics/Mechanical systems
Research InstitutionNagoya University

Principal Investigator

ARAI Fumihito  名古屋大学, 工学(系)研究科(研究院), 教授 (90221051)

Co-Investigator(Kenkyū-buntansha) KAWAHARA Tomohiro  九州工業大学, 若手研究者フロンティア研究アカデミー, 准教授 (20575162)
魚住 信之  東北大学, 工学(系)研究科(研究院), 教授 (40223515)
丸山 央峰  名古屋大学, 工学(系)研究科(研究院), 准教授 (60377843)
Co-Investigator(Renkei-kenkyūsha) MARUYAMA Hisataka  名古屋大学, 大学院工学研究科, 准教授 (60377843)
UOZUMI Nobuyuki  東北大学, 大学院工学研究科, 教授 (40223515)
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥46,410,000 (Direct Cost: ¥35,700,000、Indirect Cost: ¥10,710,000)
Fiscal Year 2014: ¥13,910,000 (Direct Cost: ¥10,700,000、Indirect Cost: ¥3,210,000)
Fiscal Year 2013: ¥14,820,000 (Direct Cost: ¥11,400,000、Indirect Cost: ¥3,420,000)
Fiscal Year 2012: ¥17,680,000 (Direct Cost: ¥13,600,000、Indirect Cost: ¥4,080,000)
Keywordsマイクロ・ナノデバイス / 超精密計測 / バイオ関連機器 / 光ピンセット / ナノバイオ / 先端機能デバイス / 細胞計測 / 生物・生体工学
Outline of Final Research Achievements

The purpose of this research is measurement of the multi-parameters of a single cyanobacteria, whose size is approximately 2 um in diameter, with high-throughput under local microfluidic environment control. Here, we constructed the systems for mechanical characterization and measurement of oxygen consumption of the cell. As for the cellular mechanical characterization, we constructed the system which enables us to transport the target cell using optical tweezers, and to measure its mechanical properties using the microfluidic chip which has on-chip robots. Using the constructed system, we investigated the effect of osmotic pressure stimulation to cyanobacteria and its mechanical properties. As for the measurement of oxygen consumption, florescent dye is utilized as sensors whose florescent intensity changes with respect to oxygen concentration. We fabricated a stripe oxygen sensor into the microchamber, and successfully measured the oxygen concentration distribution of confined space.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (22 results)

All 2015 2014 2013 2012 Other

All Journal Article (5 results) (of which Peer Reviewed: 5 results,  Open Access: 1 results,  Acknowledgement Compliant: 2 results) Presentation (15 results) Remarks (2 results)

  • [Journal Article] Comparative analysis of kdp and ktr mutants reveals distinct roles of the potassium transporters in the model cyanobacterium Synechocystis sp. PCC 68032014

    • Author(s)
      Nanatani, K., Shijuku, T., Takano, Y., Zulkifli, L., Yamazaki, Y., Tominaga, A., Souma, S., Onai, K., Morishita, M., Ishiura, M., Hagemann, M., Suzuki, I., Maruyama, H., Arai, F., Uozumi, N.
    • Journal Title

      J. Bacteriology

      Volume: - Issue: 4 Pages: 676-87

    • DOI

      10.1128/jb.02276-14

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Defining membrane spanning domains and crucial membrane-localized acidic amino acid residues for K+ transport of a Kup/HAK/KT-type Escherichia coli potassium transporter2014

    • Author(s)
      Sato, Y., Nanatani, K., Hamamoto, S., Shimizu, M., Takahashi, M., Tabuchi-Kobayashi, M., Mizutani, A., Schroeder, J. I., Soma, S., and Uozumi, N
    • Journal Title

      J. Biochem

      Volume: 155 Pages: 315-323

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Characterization of the role of a mechanosensitive channel in osmotic down shock adaptation in Synechocystis sp. PCC 68032013

    • Author(s)
      Nanatani K, Shijuku T, Akai M, Yukutake Y, Yasui M, Onai K, Morishita M, Ishiura M, Uozumi N
    • Journal Title

      Channels

      Volume: 7 Issue: 4 Pages: 238-242

    • DOI

      10.4161/chan.25350

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Aquaporin AqpZ is involved in cell volume regulation and sensitivity to osmotic stress in Synechocystis sp. strain PCC 6803.2012

    • Author(s)
      Akai, M.
    • Journal Title

      J Bacteriol

      Volume: 194 Issue: 24 Pages: 6828-6836

    • DOI

      10.1128/jb.01665-12

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Thylakoid potassium channel is required for efficient photosynthesis in cyanobacteria2012

    • Author(s)
      Checchetto, V., Segalla, A., Allorent, G., Rocca, N. L., Leanza, L., Giacometti, G.M., Uozumi, N., Finazzi, G., Bergantinoa,E., and Szabo, I
    • Journal Title

      Proc. Natl. Acad. Sci. USA

      Volume: 109 Issue: 27 Pages: 11043-11048

    • DOI

      10.1073/pnas.1205960109

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] ラン藻のオンチップ機械的特徴量計測2015

    • Author(s)
      長谷川貴之,佐久間臣耶,七谷圭,魚住信之,新井史人
    • Organizer
      日本機械学会ロボティクス・メカトロニクス講演会’15
    • Place of Presentation
      京都
    • Year and Date
      2015-05-17 – 2015-05-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] On-chip Measurement of Mechanical Properties of a Single Cyanobacteria Using Direct-Outer-Drive Mechanism2014

    • Author(s)
      Takayuki Hasegawa, Shinya Sakuma, Fumihito Arai
    • Organizer
      2014 IEEE Int. Symp. on Micro-Nano Mechatronicics and Human Sciense (MHS2014)
    • Place of Presentation
      Nagoya
    • Year and Date
      2014-11-09 – 2014-11-12
    • Related Report
      2014 Annual Research Report
  • [Presentation] 単一卵子酸素消費計測のためのオンチップ非接触蛍光センシング2014

    • Author(s)
      鬼頭雅伸,丸山央峰,新井史人
    • Organizer
      日本機械学会ロボティクス・メカトロニクス講演会’14
    • Place of Presentation
      富山
    • Year and Date
      2014-05-25 – 2014-05-29
    • Related Report
      2014 Annual Research Report
  • [Presentation] 蛍光酸素センサを用いたオンチップ単一卵子酸素消費量計測2013

    • Author(s)
      鬼頭雅伸,丸山央峰,新井史人
    • Organizer
      第28回化学とマイクロ・ナノシステム学会
    • Place of Presentation
      姫路
    • Year and Date
      2013-12-05 – 2013-12-06
    • Related Report
      2013 Annual Research Report
  • [Presentation] オンチップ・インピーダンスアナライザ(気液界面による静電デバイスの空間的分離)2013

    • Author(s)
      垣尾翼,佐久間臣耶,杉田真邦,新井史人
    • Organizer
      ロボティクス・メカトロニクス講演会2013
    • Place of Presentation
      つくば
    • Year and Date
      2013-05-22 – 2013-05-25
    • Related Report
      2013 Annual Research Report
  • [Presentation] Synechocystis sp. PCC6803の細胞外多糖生産を調節する機構解析2013

    • Author(s)
      富永 昴
    • Organizer
      日本農芸化学会2013年度大会
    • Place of Presentation
      東北大学(仙台市)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 細胞の超高速力計測のためのオンチップ静電容量型センサ2012

    • Author(s)
      伊藤 啓太郎
    • Organizer
      日本機械学会ロボティクス・メカトロニクス講演会’12
    • Place of Presentation
      アクトシティ浜松(浜松市)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 蛍光差分情報による光退色補償を用いた超長時間非接触蛍光計測2012

    • Author(s)
      丸山 央峰
    • Organizer
      日本機械学会ロボティクス・メカトロニクス講演会’12
    • Place of Presentation
      アクトシティ浜松(浜松市)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Membrane transport system conferring the salinity tolerance to bacteria and plant cells.2012

    • Author(s)
      Uozumi, N.
    • Organizer
      6th Japan-Finland Biotechnology Symposium 2012
    • Place of Presentation
      東北学院大学(仙台市)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Functional characterization of K transporters in Synechocystis sp. PCC 6803.2012

    • Author(s)
      Nanatani, K.
    • Organizer
      The IUBMB & FEBS 2012 Congress
    • Place of Presentation
      Seville,スペイン
    • Related Report
      2012 Annual Research Report
  • [Presentation] OCIAN:オンチップインピーダンスアナライザ―細胞の高精度・高速連続特性評価のためのオンチップロボットの作製―2012

    • Author(s)
      垣尾 翼
    • Organizer
      日本ロボット学会第30回記念学術講演会
    • Place of Presentation
      札幌コンベンションセンター(札幌市)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Synechocystis sp. PCC 6803 の浸透圧調節に関与するKdp系Kトランスポーターの機能解析2012

    • Author(s)
      七谷 圭
    • Organizer
      第64回日本生物工学会大会
    • Place of Presentation
      神戸国際会議場(神戸市)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Ultra Long-Lifetime and High-Sensitive Fluorescent Measurement Using Difference Compensation Method for Single Cell Analysis2012

    • Author(s)
      H. Maruyama
    • Organizer
      2012 IEEE/RSJ International Conference on Intelligent Robots and Systems
    • Place of Presentation
      The Hotel Tivoli Marina Vilamoura (Algarve)
    • Related Report
      2012 Annual Research Report
  • [Presentation] IN-SITU MEASUREMENT OF PHOTOSYNTHESIS USING SINGLE SYNECOCYSTIS SP. PCC 6803 IN A MICROCHAMBER WITH GAS BARRIER WALL2012

    • Author(s)
      H. Maruyama
    • Organizer
      16th International Conference on Miniaturized System for Chemistry and Life Sciences
    • Place of Presentation
      Okinawa Convention Center (Ginowan)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Measurement of Photosynthesis Activity Using Single Synecocystis SP. PCC 6803 on Microchambers Having Gas Barrier Wall and Fluorescence Oxygen Sensor2012

    • Author(s)
      H. Maruyama
    • Organizer
      2012 International Symposium on Micro-NanoMechatronics and Human Science
    • Place of Presentation
      Noyori Conference Hall (Nagoya)
    • Related Report
      2012 Annual Research Report
  • [Remarks] 名古屋大学大学院工学研究科マイクロ・ナノシステム工学専攻 新井研究室 Research Fields

    • URL

      http://www.biorobotics.mech.nagoya-u.ac.jp/research/research.html

    • Related Report
      2014 Annual Research Report 2013 Annual Research Report
  • [Remarks] 名古屋大学大学院工学研究科マイクロ・ナノシステム工学専攻 新井研究室 Research Fields

    • URL

      http://www.biorobotics.mech.nagoya-u.ac.jp/research/

    • Related Report
      2012 Annual Research Report

URL: 

Published: 2013-05-15   Modified: 2019-07-29  

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