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Analysis of the molecular mechanism of vertebral column formation by a cross-species genome engineering approach between mice and zebrafish

Research Project

Project/Area Number 24300154
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Laboratory animal science
Research InstitutionOsaka University

Principal Investigator

KOKUBU Chikara  大阪大学, 医学(系)研究科(研究院), 准教授 (70379238)

Co-Investigator(Kenkyū-buntansha) SHUKUNAMI Chisa  広島大学, 大学院医歯薬保健学研究科, 教授 (60303905)
HIRAKI Yuji  京都大学, 再生医科学研究所, 教授 (40144498)
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥17,810,000 (Direct Cost: ¥13,700,000、Indirect Cost: ¥4,110,000)
Fiscal Year 2014: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Fiscal Year 2013: ¥5,980,000 (Direct Cost: ¥4,600,000、Indirect Cost: ¥1,380,000)
Fiscal Year 2012: ¥5,720,000 (Direct Cost: ¥4,400,000、Indirect Cost: ¥1,320,000)
Keywords比較ゲノム / 軟骨形成 / 発生・分化 / 発現制御 / ゲノム
Outline of Final Research Achievements

The structure and function of the Pax1 genomic region, which is essential for vertebral column formation, was compared between the mouse and zebrafish by a cross-species genome engineering approach. Transgenic reporter assays revealed that a mouse sclerotome (vertebral anlage)-specific enhancer mPf1 (0.8 kb) did not show enhancer activity in zebrafish embryos, while its zebrafish ortholog zPf1 (0.7 kb) drove stronger sclerotomal expression in mice than the isogenic mPf1. Another sclerotomal enhancer mXe1 (1.7 kb), which is evolutionary conserved in terrestrial vertebrates but not in aquatic vertebrates, drove robust reporter expression in the zebrafish sclerotome. Intriguingly, forced expression of Pax1 driven by the Xe1 enhancer transgene inhibited cartilage formation in zebrafish. The inhibitory role of Pax1 against cartilage formation was further analyzed in detail by forced expression experiments in chicken embryos and primary cultured cells.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (9 results)

All 2015 2014 2013

All Journal Article (2 results) (of which Peer Reviewed: 1 results) Presentation (6 results) (of which Invited: 4 results) Book (1 results)

  • [Journal Article] CRISPR/Casがゲノムワイド遺伝子スクリーニングにもたらした革命2015

    • Author(s)
      國府 力
    • Journal Title

      医学のあゆみ

      Volume: 252 Pages: 14574-14578

    • Related Report
      2014 Annual Research Report
  • [Journal Article] Pax1 acts as a negative regulator of chondrocyte maturation.2013

    • Author(s)
      Takimoto A, Mohri H, Kokubu C, Hiraki Y, Shukunami C.
    • Journal Title

      Exp Cell Res.

      Volume: 319 Issue: 20 Pages: 3128-3139

    • DOI

      10.1016/j.yexcr.2013.09.015

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Presentation] Molecular mechanisms regulating tendon and ligament formation2014

    • Author(s)
      Chisa Shukunami
    • Organizer
      The 11th Bone Biology Forum Lecture VI
    • Place of Presentation
      Susono
    • Year and Date
      2014-08-23
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 腱と骨を連結する分子機構2014

    • Author(s)
      宿南知佐
    • Organizer
      第32回日本骨代謝学会 カレントコンセプト
    • Place of Presentation
      東京
    • Year and Date
      2014-07-26
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 椎間板形成におけるPax1の役割2014

    • Author(s)
      滝本晶, 開祐司, 宿南知佐
    • Organizer
      第32回日本骨代謝学会学術集会
    • Place of Presentation
      大阪
    • Year and Date
      2014-07-24 – 2014-07-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] Whole-genome sequencing analysis of radiation-induced genomic rearrangements in BLM-suppressed mouse embryonic stem cells.2014

    • Author(s)
      Kokubu C., Yamanishi A., Yamagata K., Sese J. and Takeda J.
    • Organizer
      FASEB Science Research Conferences “Dynamic DNA Structures in Biology”
    • Place of Presentation
      Itasca, Illinois, USA
    • Year and Date
      2014-07-20 – 2014-07-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] 筋骨格系を連結する腱・靱帯形成の分子機構2014

    • Author(s)
      宿南知佐
    • Organizer
      第27回骨代謝セミナー
    • Place of Presentation
      東京
    • Year and Date
      2014-06-06
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] マウスES細胞のミュタジェネシス:点変異からゲノム再構成変異まで2014

    • Author(s)
      國府 力
    • Organizer
      京都大学再生医科学研究所「再生医学・再生医療の先端融合的共同研究拠点」公開シンポジウム
    • Place of Presentation
      京都大学芝蘭会館稲森ホール
    • Year and Date
      2014-05-13
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Book] 実験医学別冊「ES・IPS細胞実験スタンダード: 再生・創薬・疾患研究のプロトコールと臨床応用の必須知識」2014

    • Author(s)
      堀江恭二、國府 力、竹田潤二
    • Total Pages
      8
    • Publisher
      トランスポゾンによるゲノム改変
    • Related Report
      2014 Annual Research Report

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Published: 2012-04-24   Modified: 2019-07-29  

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