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Discovery of coumarin prenyltransferase family and the regulation of catalytic function

Research Project

Project/Area Number 24310156
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Living organism molecular science
Research InstitutionKyoto University

Principal Investigator

YAZAKI Kazufumi  京都大学, 生存圏研究所, 教授 (00191099)

Co-Investigator(Kenkyū-buntansha) SUGIYAMA Akifumi  京都大学, 生存圏研究所, 助教 (20598601)
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥19,630,000 (Direct Cost: ¥15,100,000、Indirect Cost: ¥4,530,000)
Fiscal Year 2014: ¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2013: ¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2012: ¥8,580,000 (Direct Cost: ¥6,600,000、Indirect Cost: ¥1,980,000)
Keywordsプレニル基転移酵素 / クマリン / ジメチルアリルジリン酸 / ゲラニルジリン酸 / 膜結合性酵素 / 色素体局在 / 柑橘類 / アシタバ / O-プレニル化 / 二次代謝 / 生合成 / 膜タンパク質 / プレニルジリン酸
Outline of Final Research Achievements

Prenylated coumarins widely occur in Apiaceae and Rutaceae. They show toxicity to herbivores and pathogens serving as protectants for plants that produce those metabolites, while those coumarin compounds show a variety of biological activities to humans, as well. Prenyltransferase, a key enzyme in the biosynthesis, has been first identified at the gene level from parsley (Apiaceae) and lemon (Rutaceae).
Prenyltransferase family for coumarins show high hydrophobicity via typically nine transmembrane alpha-helices, and they show strict specificity to both prenyl donor and acceptor substrates. For the catalytic function, Mg2+ is required and the subcellular localization of these membrane proteins is demonstrated to be plastids in plant cells.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (21 results)

All 2015 2014 2013 2012 Other

All Journal Article (6 results) (of which Peer Reviewed: 5 results,  Acknowledgement Compliant: 3 results) Presentation (12 results) (of which Invited: 3 results) Remarks (2 results) Patent(Industrial Property Rights) (1 results) (of which Overseas: 1 results)

  • [Journal Article] Molecular cloning and characterization of a geranyl diphosphate-specific aromatic prenyltransferase from lemon2014

    • Author(s)
      Ryosuke Munakata, Tsuyoshi Inoue, Takao Koeduka, Fazeelat Karamat, Alexandre Olry, Akifumi Sugiyama, Kojiro Takanashi, Audray Dugrand, Yann Froelicher, Ryo Tanaka, Yoshihiro Uto, Hitoshi Hori, Jun-Ichi Azuma, Alain Hehn, Frédéric Bourgaud, and Kazufumi Yazaki
    • Journal Title

      Plant physiology

      Volume: 166 Issue: 1 Pages: 80-90

    • DOI

      10.1104/pp.114.246892

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Metabolic engineering of flavonoids with prenyltransferase and chalcone isomerase genes in tomato fruits2014

    • Author(s)
      Kawasaki, K., Koeduka, T., Sugiyama, A., Sasaki, K., Linley, PJ., Shitan, S., Kumano, T., Yamamoto, H., Ezura, H., Kuzuyama, T., Yazaki, K.
    • Journal Title

      Plant Biotechnology

      Volume: 31 Issue: 5 Pages: 567-571

    • DOI

      10.5511/plantbiotechnology.14.0918a

    • NAID

      130004713024

    • ISSN
      1342-4580, 1347-6114
    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] 植物の化学防御物質フラノクマリン類の生合成に関与するプレニル化酵素2014

    • Author(s)
      棟方涼介、矢崎一史
    • Journal Title

      バイオサイエンスとインダストリー

      Volume: 72 Pages: 312-314

    • NAID

      40020155026

    • Related Report
      2014 Annual Research Report
    • Acknowledgement Compliant
  • [Journal Article] A coumarin-specific prenyltransferase catalyzes the crucial biosynthetic reaction for furanocoumarin formation in parsley2014

    • Author(s)
      Fazeelat Karamat, Alexandre Olry, Ryosuke Munakata, Takao Koeduka, Akifumi Sugiyama, Cedric Paris, Alain Hehn, Fredric Bourgaud, Kazufumi Yazaki
    • Journal Title

      The Plant Journal

      Volume: 77 Issue: 4 Pages: 627-638

    • DOI

      10.1111/tpj.12409

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Homogeneous purification and characterization of LePGT1-a membrane-bound aromatic substrate prenyltransferase involved in secondary metabolism of2013

    • Author(s)
      Ohara, K, et al.
    • Journal Title

      FEBS J.

      Volume: (印刷中) Issue: 11 Pages: 2572-1580

    • DOI

      10.1111/febs.12239

    • Related Report
      2013 Annual Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Characterization of Coumarin-Specific Prenyltransferase Activities in <i>Citrus limon</i> Peel2012

    • Author(s)
      Munakata, R., et al.
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: 76 Issue: 7 Pages: 1389-1393

    • DOI

      10.1271/bbb.120192

    • NAID

      10030982292

    • ISSN
      0916-8451, 1347-6947
    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] パースニップのフラノクマリン経路において膜結合型プレニル化酵素はリニア型 / アンギュラー型 生合成の運命を決定する2015

    • Author(s)
      棟方涼介, Fazeelat KARAMAT, Alexandre OLRY, Courdavault VINCENT, 杉山暁史, 伊達慶明, Celia KRIEGER, Nicolas PAPON, Emilien FOURREAU, Jeremy GROSJEAN, 矢崎一史, Frederic BOURGAUD, Alain HEHN
    • Organizer
      日本農芸化学会岡山大会
    • Place of Presentation
      岡山市
    • Year and Date
      2015-03-26 – 2015-03-29
    • Related Report
      2014 Annual Research Report
  • [Presentation] アシタバの膜結合型プレニル基転移酵素はクマリン類の O-プレニル化を触媒する2015

    • Author(s)
      棟方涼介、Florence Jacob、肥塚崇男、杉山暁史、矢崎一史
    • Organizer
      第56回日本植物生理学会年会
    • Place of Presentation
      東京
    • Year and Date
      2015-03-16 – 2015-03-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] 芳香族基質 O-プレニル化酵素 cDNA の機能解析と分子進化2014

    • Author(s)
      棟方 涼介、Jacob Florence、肥塚 崇男、杉山 暁史、矢崎 一史
    • Organizer
      第24回イソプレン研究会例会
    • Place of Presentation
      岡山市
    • Year and Date
      2014-09-12
    • Related Report
      2014 Annual Research Report
  • [Presentation] Membrane-bound dimethylallyltransferase for umbelliferone catalyzes the first committed biosynthetic reaction in furanocoumarin formation2014

    • Author(s)
      Ryosuke Munakata, Karamat Fazeelat, Alexandre Olry, Takao Koeduka, Masaharu Mizutani, Célia Krieger, Akifumi Sugiyama, Cedric Paris, Alain Hehn, Frédéric Bourgaud, Kazufumi Yazaki
    • Organizer
      The XXVIIth International Conference on Polyphenols & The 8th Tannin Conference
    • Place of Presentation
      Nagoya
    • Year and Date
      2014-09-02 – 2014-09-06
    • Related Report
      2014 Annual Research Report
  • [Presentation] アシタバからの芳香族基質 O -プレニル化酵素 cDNA の単離と機能解析2014

    • Author(s)
      棟方 涼介、Jacob Florence、肥塚 崇男、杉山 暁史、矢崎 一史
    • Organizer
      第32回日本植物細胞分子生物学会
    • Place of Presentation
      盛岡市
    • Year and Date
      2014-08-21 – 2014-08-22
    • Related Report
      2014 Annual Research Report
  • [Presentation] 植物の機能性低分子化合物を生産する遺伝子の単離と応用2014

    • Author(s)
      矢崎一史
    • Organizer
      第13回京都大学宇治キャンパス産学交流会
    • Place of Presentation
      宇治市
    • Year and Date
      2014-07-03
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] ミカン科レモンからのクマリン基質プレニル基転移酵素cDNAの単離と機能解析2013

    • Author(s)
      棟方涼介
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山大学(岡山県)
    • Year and Date
      2013-03-23
    • Related Report
      2012 Annual Research Report
  • [Presentation] グレープフルーツの芳香族基質O-プレニル基転移酵素のクローニングと機能解析2013

    • Author(s)
      棟方涼介、ほか8名
    • Organizer
      第31回日本植物細胞分子生物学会
    • Place of Presentation
      札幌
    • Related Report
      2013 Annual Research Report
  • [Presentation] クマリン類の化学構造多様性の鍵となるプレニル基転移酵素ファミリーの解明2013

    • Author(s)
      棟方涼介、ほか12名
    • Organizer
      第23回イソプレノイド研究会
    • Place of Presentation
      東京
    • Related Report
      2013 Annual Research Report
  • [Presentation] ポリフェノールの高付加価値化を担うプレニル化酵素とバイオテクノロジー2013

    • Author(s)
      矢崎一史
    • Organizer
      静岡県バイオテクノロジー研究会特別講演会
    • Place of Presentation
      静岡
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Prenyltransferase: an enzyme family contributing to the chemical diversity of plant secondary metabolites2013

    • Author(s)
      Kazufumi Yazaki
    • Organizer
      50th Memorial Symposium on Phytochemistry
    • Place of Presentation
      東京
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] ミカン科におけるクマリン特異的プレニル基転移酵素の探索と機能解析2012

    • Author(s)
      矢崎一史
    • Organizer
      第30回日本植物細胞分子生物学会
    • Place of Presentation
      奈良先端大(奈良県)
    • Year and Date
      2012-08-05
    • Related Report
      2012 Annual Research Report
  • [Remarks] 研究業績 森林圏遺伝子統御分野 矢崎研究室

    • URL

      http://www.rish.kyoto-u.ac.jp/lpge/publications.html

    • Related Report
      2014 Annual Research Report
  • [Remarks] 京都大学生存圏研究所 矢崎研究室 研究業績

    • URL

      http://www.rish.kyoto-u.ac.jp/W/LPGE/publications.html

    • Related Report
      2013 Annual Research Report
  • [Patent(Industrial Property Rights)] New method for inhibiting production of furanocoumarins in plants2015

    • Inventor(s)
      ブルゴー、ヘーン、オルリー、棟方、矢崎、水谷
    • Industrial Property Rights Holder
      ブルゴー、ヘーン、オルリー、棟方、矢崎、水谷
    • Industrial Property Rights Type
      特許
    • Filing Date
      2015-02-15
    • Related Report
      2014 Annual Research Report
    • Overseas

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Published: 2012-04-24   Modified: 2019-07-29  

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