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Zoogeographic and systematic studies on marine and diadromous fishes related to glacial-interglacial cycles

Research Project

Project/Area Number 24370036
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Biodiversity/Systematics
Research InstitutionKyoto University

Principal Investigator

TETSUJI Nakabo  京都大学, 総合博物館, 教授 (20164270)

Co-Investigator(Kenkyū-buntansha) NAKAYAMA Kouji  京都大学, 大学院農学研究科, 助教 (50324661)
KAI Yoshiaki  京都大学, フィールド科学教育研究センター, 助教 (30379036)
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥9,230,000 (Direct Cost: ¥7,100,000、Indirect Cost: ¥2,130,000)
Fiscal Year 2014: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Fiscal Year 2013: ¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2012: ¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
Keywords種分化 / 氷河期海洋生物地理 / 系統地理学 / 氷河期海洋歴史生物地理 / 集団・種多様性 / 分類体系 / 氷期-間氷期
Outline of Final Research Achievements

For an understanding of the impact of glacial–interglacial cycles on distribution of fishes of the Japanese Archipelago and neighboring regions, we determined patterns of population structure focusing on marine and diadromous fishes. We found extensive population sub-divisions among geographic regions associated with a sea-level regression during glacial periods in some marine cold-water species. In addition, the genetic population structure in marine temperate-water species suggested population subdivision during glacial periods and consequent secondary contact during interglacial periods across the Tsushima Strait. Although the impact of glacial–interglacial cycles on freshwater fishes is well known, we showed such impact also have affected the population structures and distributional patterns of marine and diadromous fishes.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (49 results)

All 2015 2014 2013 2012

All Journal Article (16 results) (of which Peer Reviewed: 16 results,  Open Access: 5 results,  Acknowledgement Compliant: 6 results) Presentation (31 results) (of which Invited: 4 results) Book (2 results)

  • [Journal Article] Population structure and sequence divergence in the mitochondrial DNA control region of gizzard shad Konosirus punctatus (Temminck & Schlegel) in Korea and Japan2015

    • Author(s)
      Gwak WS, Lee YD, Nakayama K
    • Journal Title

      Ichthyological Research

      Volume: 62 Issue: 3 Pages: 379-385

    • DOI

      10.1007/s10228-014-0450-7

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Morphological divergence between two color morphotypes of Crystallichthys matsushimae (Cottoidei: Liparidae)2015

    • Author(s)
      Tohkairin A, Kai Y, Ueda Y, Hamatsu T, Ito M, Nakabo T
    • Journal Title

      Ichthyological Research

      Volume: 62 Issue: 2 Pages: 145-155

    • DOI

      10.1007/s10228-014-0414-y

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Molecular insights into geographic and morphological variation within the Eumicrotremus asperrimus species complex (Cottoidei: Cyclopteridae)2015

    • Author(s)
      Kai Y, Stevenson DE, Ueda Y, Hamatsu T, Nakabo T
    • Journal Title

      Ichthyological Research

      Volume: 62 Issue: 4 Pages: 396-408

    • DOI

      10.1007/s10228-014-0453-4

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] An illustrated and annotated checklist of fishes on Kitami-Yamato Bank, southern Sea of Okhotsk2015

    • Author(s)
      Tohkairin A, Hamatsu T, Yoshikawa A, Kai Y, Nakabo T
    • Journal Title

      Publications of the Seto Marine Biological Laboratory

      Volume: 43 Pages: 1-29

    • NAID

      120005530929

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Systematics of North Pacific sand lances of the genus Ammodytes based on molecular and morphological evidence2015

    • Author(s)
      Orr JW, Sharon W, Kai Y, Raring N, Nakabo T, Katugin O, Guyon J
    • Journal Title

      Fishery Bulletine

      Volume: 113 Issue: 2 Pages: 129-156

    • DOI

      10.7755/fb.113.2.3

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Growth-related morphology of “Kunimasu” (Oncorhynchus kawamurae :Family Salmonidae) from Lake Saiko, Yamanashi Prefecture, Japan2014

    • Author(s)
      Nakabo T, Tohkairin A, Muto N, Watanabe Y, Miura Y, Miura H, Aoyagi T, Kaji N, Nakayama K, Kai Y
    • Journal Title

      Ichthyological Research

      Volume: 61 Issue: 2 Pages: 115-130

    • DOI

      10.1007/s10228-013-0382-7

    • NAID

      40020049154

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Population structure and demographic history of Davidijordania poecilimon (Teleostei: Perciformes: Zoarcidae)2014

    • Author(s)
      Kai Y, Ueda Y, Fujiwara K, Itoh M, Yamasaki A, Nakabo T
    • Journal Title

      Species Diversity

      Volume: 19 Pages: 15-19

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] First record of a rockfish (Sebastidae), Sebastes melanops, from the western North Pacific, with comments on its synonymy.2013

    • Author(s)
      Kai Y, Muto N, Noda T, Orr JW, Nakabo T
    • Journal Title

      Species Diversity

      Volume: 18 Pages: 175-182

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Sebastodes tanakae, a junior synonym of Sebastes trivittatus (Scorpaenoidei: Sebastidae).2013

    • Author(s)
      Kai Y, Muto N, Nakabo T
    • Journal Title

      Ichthyological Research

      Volume: 60 Issue: 3 Pages: 272-276

    • DOI

      10.1007/s10228-013-0345-z

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Extensive hybridization and associated geographic trends between two rockfishes Sebastes vulpes and S. zonatus (Teleostei: Scorpaeniformes: Sebastidae).2013

    • Author(s)
      Muto N, Kai Y, Noda T, Nakabo T
    • Journal Title

      Journal of Evolutionary Biology

      Volume: 28 Issue: 8 Pages: 1750-1762

    • DOI

      10.1111/jeb.12175

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] First record of albinism in the rockfish Sebastes pachycephalus complex (Scorpaeniformes: Scorpaenidae).2013

    • Author(s)
      Muto N, Noda T, Kai Y, Nakabo T
    • Journal Title

      Ichthyological Research

      Volume: 60 Issue: 2 Pages: 195-197

    • DOI

      10.1007/s10228-012-0320-0

    • NAID

      10031168395

    • Related Report
      2013 Annual Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mitochondrial DNA sequence divergence between “Kunimasu” Oncorhynchus kawamurae and “Himemasu” O.nerka in Lake Saiko, Yamanashi Prefecture, Japan, and their identification using multiplex haplotype-specific PCR.2013

    • Author(s)
      Nakayama K, Muto N, Nakabo T
    • Journal Title

      Ichthyological Research

      Volume: 60 Issue: 3 Pages: 277-281

    • DOI

      10.1007/s10228-013-0346-y

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Extensive hybridization and associated geographic trends between two rockfishes Sebastes vulpes and S. zonat us(Teleostei: Scorpaeniformes: Sebastidae)2013

    • Author(s)
      Muto N, Kai Y, Noda T, Nakabo T
    • Journal Title

      Journal of Evolutionary Biology

      Volume: (印刷中)

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Taxonomic review of the Sebastes pachycephalus species complex (Teleostei : Scorpaeniformes : Sebastidae)2013

    • Author(s)
      Kai Y, Nakabo T
    • Journal Title

      Zootaxa

      Volume: 3637 Issue: 5 Pages: 541-560

    • DOI

      10.11646/zootaxa.3637.5.3

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Distinct genetic isolation between"Kunimasu"(Oncorhynchus kawamurae)and"Himemasu" (O. nerka) in Lake Saiko, Yamanashi Prefecture, Japan, inferred from microsatellite analysis2013

    • Author(s)
      Muto N, Nakayama K, Nakabo T
    • Journal Title

      Ichthyological Research

      Volume: 60 Issue: 2 Pages: 188-194

    • DOI

      10.1007/s10228-012-0323-x

    • NAID

      10031168394

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The incomplete history of mitochondrial DNA lineages between Sebastes longispinis and S. hubbsi (Scorpaeniformes : Scorpaenidae).2012

    • Author(s)
      Kai Y, Park KD, Nakabo T
    • Journal Title

      Journal of Fish Biology

      Volume: 81 Issue: 3 Pages: 954-965

    • DOI

      10.1111/j.1095-8649.2012.03326.x

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] 日本沿岸域におけるタビラクチの系統地理学的検討2014

    • Author(s)
      松井彰子・乾 隆帝・山下 洋・中山耕至
    • Organizer
      日本魚類学会年会
    • Place of Presentation
      神奈川県立生命の星・地球博物館
    • Year and Date
      2014-11-14 – 2014-11-17
    • Related Report
      2014 Annual Research Report
  • [Presentation] 日本初記録のタウエガジ科魚類 Dictyosoma tongyeongensis2014

    • Author(s)
      甲斐嘉晃・池口新一郎・金 眞久・中坊徹次
    • Organizer
      日本魚類学会年会
    • Place of Presentation
      神奈川県立生命の星・地球博物館
    • Year and Date
      2014-11-14 – 2014-11-17
    • Related Report
      2014 Annual Research Report
  • [Presentation] オホーツク海北海道沖において着底トロール網により得られた底魚類2014

    • Author(s)
      東海林 明・濱津友紀・甲斐嘉晃・中坊 徹次
    • Organizer
      日本魚類学会年会
    • Place of Presentation
      神奈川県立生命の星・地球博物館
    • Year and Date
      2014-11-14 – 2014-11-17
    • Related Report
      2014 Annual Research Report
  • [Presentation] 北太平洋産ユメカサゴ属3種の形態的特徴と分布2014

    • Author(s)
      吉川 茜・甲斐嘉晃・中坊徹次
    • Organizer
      日本魚類学会年会
    • Place of Presentation
      神奈川県立生命の星・地球博物館
    • Year and Date
      2014-11-14 – 2014-11-17
    • Related Report
      2014 Annual Research Report
  • [Presentation] “Fishes of Japan with pictorial keys to the species” and the fish collection of Kyoto University (FAKU)2014

    • Author(s)
      Nakabo, T
    • Organizer
      Symposium on the Collection of Fish Specimen
    • Place of Presentation
      MABIK, Gunsan, Korea
    • Year and Date
      2014-07-03
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Fish Collection Building in Kyoto University: Present Status2014

    • Author(s)
      Kai, Y
    • Organizer
      Symposium on the Collection of Fish Specimen
    • Place of Presentation
      MABIK, Gunsan, Korea
    • Year and Date
      2014-07-03
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Struggles with species-limits2014

    • Author(s)
      Nakabo T
    • Organizer
      Fishery Sciences Association of Korea
    • Place of Presentation
      BEXICO, Busan, Korea
    • Year and Date
      2014-07-02
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Molecular insights into geographic and morphological variation within the Eumicrotremus asperrimus species complex (Cottoidei: Cyclopteridae)2014

    • Author(s)
      Kai Y, Stevenson DE, Ueda Y, Hamatsu T, Nakabo T
    • Organizer
      Fishery Sciences Association of Korea
    • Place of Presentation
      BEXICO, Busan, Korea
    • Year and Date
      2014-07-02
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] マイクロサテライトDNA分析から見たアカメの遺伝的集団構造2014

    • Author(s)
      上田修作・武島弘彦・高橋 洋・田上英明・中山耕至・小松輝久
    • Organizer
      日本生態学会大会
    • Place of Presentation
      広島国際会議場(広島県広島市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Morphological and genetic divergence in Crystallichthys matsushimae (Cottoidei, Liparidae).2013

    • Author(s)
      Tohkairin A, Kai Y, Ueda Y, Hamatsu T, Ito M, Nakabo T.
    • Organizer
      Morphological and genetic divergence in Crystallichthys matsushimae (Cottoidei, Liparidae).
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県宜野湾市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Genetic divergence in the Careproctus rastrinus species complex (Liparidae) inferred from AFLP: evidence of secondary contact in the Bering Sea.2013

    • Author(s)
      Kai Y, Orr JW, Nakabo T.
    • Organizer
      9th Indo-Pacific Fish Conference,
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県宜野湾市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Historical divergence followed by secondary contact in Sebastes trivittatus (Scorpaeniformes: Sebastidae).2013

    • Author(s)
      Muto N, Kai Y, Noda T, Nakabo T.
    • Organizer
      9th Indo-Pacific Fish Conference,
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県宜野湾市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Taxonomic review of Kyphosus species (Perciformes, Kyphosidae) from the Indo-Pacific and Atlantic Oceans.2013

    • Author(s)
      Sakai K, Kai Y, Nakabo T. 2013.
    • Organizer
      9th Indo-Pacific Fish Conference,
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県宜野湾市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] “Kunimasu”, Oncorhynchus kawamurae Jordan and McGregor, 1925 (Salomoniformes: Salmonidae), rescued from extinction.2013

    • Author(s)
      Nakabo T, Tohkairin A, Muto N, Kai Y, Nakayama K.
    • Organizer
      9th Indo-Pacific Fish Conference,
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県宜野湾市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Population structure and sequence divergence in the mitochondrial DNA control region of Gizzard shad Konosirus Punctatus in Korea and Japan.2013

    • Author(s)
      Gwak W-S, Han D-H, Nakayama K.
    • Organizer
      9th Indo-Pacific Fish Conference,
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県宜野湾市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Contrasting genetic population structures among three species of Acentrogobius around the Japanese archipelago.2013

    • Author(s)
      Matsui S, Nakayama K, Kai Y, Yamashita Y.
    • Organizer
      9th Indo-Pacific Fish Conference,
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県宜野湾市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 日本海から得られたダンゴウオの形態的・遺伝的特徴.2013

    • Author(s)
      甲斐嘉晃・池口新一郎・中坊徹次.
    • Organizer
      日本魚類学会
    • Place of Presentation
      宮崎観光ホテル(宮崎県宮崎市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] AFLP法によるアバチャン(クサウオ科)の遺伝的集団構造の推定2013

    • Author(s)
      東海林明・甲斐嘉晃・上田祐司・濱津友紀・伊藤正木・中坊徹次
    • Organizer
      日本魚類学会
    • Place of Presentation
      宮崎観光ホテル(宮崎県宮崎市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] アカタナゴ2集団の形態的差異2013

    • Author(s)
      片渕弘志・甲斐嘉晃・中坊徹次
    • Organizer
      日本魚類学会
    • Place of Presentation
      宮崎観光ホテル(宮崎県宮崎市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] ミトコンドリアDNA分析からみた韓国および日本沿岸におけるコノシロの遺伝的集団構造2013

    • Author(s)
      W-S Gwak・D-H Han・中山耕至
    • Organizer
      日本魚類学会
    • Place of Presentation
      宮崎観光ホテル(宮崎県宮崎市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 中国および韓国におけるスズキ-タイリクスズキ間の自然交雑の確認2013

    • Author(s)
      山田 諒・中山耕至・W-S GWAK
    • Organizer
      日本魚類学会
    • Place of Presentation
      宮崎観光ホテル(宮崎県宮崎市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] マイクロサテライトDNA分析からみた高知県産アカメの遺伝的集団構造2013

    • Author(s)
      上田修作・武島弘彦・高橋 洋・田上英明・中山耕至・小松輝久
    • Organizer
      日本魚類学会
    • Place of Presentation
      宮崎観光ホテル(宮崎県宮崎市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] キララハゼ3種における遺伝的集団構造と生態的特性の関係2013

    • Author(s)
      松井彰子・中山耕至・甲斐嘉晃・山下 洋
    • Organizer
      日本魚類学会
    • Place of Presentation
      宮崎観光ホテル(宮崎県宮崎市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] アカシタビラメとデンベエシタビラメの遺伝的比較2012

    • Author(s)
      田路拓人・中山耕至
    • Organizer
      日本魚類学会
    • Place of Presentation
      水産大学校(山口県下関市)
    • Year and Date
      2012-09-25
    • Related Report
      2012 Annual Research Report
  • [Presentation] 北太平洋におけるコンペイトウ(ダンゴウオ科)の形態変異と遺伝的集団構造.2012

    • Author(s)
      甲斐嘉晃・Duane E. Stevenson ・上田祐司・濱津友紀・中坊徹次
    • Organizer
      日本魚類学会
    • Place of Presentation
      水産大学校 (山口県下関市)
    • Year and Date
      2012-09-24
    • Related Report
      2012 Annual Research Report
  • [Presentation] アバチャン(クサウオ科 : スイショウウオ属)に見られる2色彩型の遺伝的差異.2012

    • Author(s)
      東海林明・甲斐嘉晃・上田祐司・濱津友紀・伊藤正木・中坊徹次
    • Organizer
      日本魚類学会
    • Place of Presentation
      水産大学校 (山口県下関市)
    • Year and Date
      2012-09-24
    • Related Report
      2012 Annual Research Report
  • [Presentation] クニマス、過去からの生還2012

    • Author(s)
      中坊徼次
    • Organizer
      日本動物学会
    • Place of Presentation
      大阪大学会館(大阪府)(招待講演)
    • Year and Date
      2012-09-14
    • Related Report
      2012 Annual Research Report
  • [Presentation] クニマスの生物学的特性2012

    • Author(s)
      中坊徹次
    • Organizer
      日本魚類学会市民公開講座
    • Place of Presentation
      山梨県立博物館(山梨県)(基調招待講演)
    • Year and Date
      2012-07-14
    • Related Report
      2012 Annual Research Report
  • [Presentation] Molecular phylogenetic perspective on the morphological diversification of Sebastes (Scorpaeniformes : Scorpaenidae) from the western North Pacific.2012

    • Author(s)
      Kai Y, Jeong CH, Nakabo T
    • Organizer
      Fish Barcode of Life World Conference 2012
    • Place of Presentation
      Yeosu, Korea
    • Year and Date
      2012-06-12
    • Related Report
      2012 Annual Research Report
  • [Presentation] Extensive introgressive hybridization in marine fishes and its geographic trends : a case of rockfishes Sebastes vulpes and S. zonatus(Scorpaeniformes : Scorpaenidae) from Japan.2012

    • Author(s)
      Muto N, Kai Y, Noda T, Nakabo T
    • Organizer
      Fish Barcode of Life World Conference 2012
    • Place of Presentation
      Yeosu, Korea
    • Year and Date
      2012-06-12
    • Related Report
      2012 Annual Research Report
  • [Presentation] Rediscovered type specimens in the fish collection of Kyoto University (FAKU).2012

    • Author(s)
      Kai Y, Nakabo Y
    • Organizer
      Association of Pacific Rim Universities (APRU) Research Symposium on University Museums
    • Place of Presentation
      京都大学(京都府)
    • Related Report
      2012 Annual Research Report
  • [Book] 南日本太平洋沿岸の魚類2015

    • Author(s)
      池田博美・中坊徹次
    • Total Pages
      597
    • Publisher
      東海大学出版部
    • Related Report
      2014 Annual Research Report
  • [Book] 東アジアにおける魚類の生物地理学(日本産魚類検索全種の同定第三版)2013

    • Author(s)
      中坊徹次
    • Total Pages
      50
    • Publisher
      東海大学出版会
    • Related Report
      2012 Annual Research Report

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Published: 2012-04-24   Modified: 2019-07-29  

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