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Regulation of the initiation of DNA replication and its higher order regulation

Research Project

Project/Area Number 24370075
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Molecular biology
Research InstitutionNational Institute of Genetics

Principal Investigator

Tanaka Seiji  国立遺伝学研究所, 細胞遺伝研究系, 助教 (50263314)

Project Period (FY) 2012-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥17,940,000 (Direct Cost: ¥13,800,000、Indirect Cost: ¥4,140,000)
Fiscal Year 2015: ¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2014: ¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2013: ¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2012: ¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
KeywordsDNA複製 / DNA複製開始 / 複製前複合体 / 細胞周期 / DNA複製開始の高次制御 / ChIP / DNA複製開始因子 / DNA複製開始複合体 / 複製開始制御
Outline of Final Research Achievements

In order to understand the detailed mechanism of the initiation of DNA replication in eukaryotic cells, we have developed a novel strategy to isolate mutants in budding yeast and have isolated tight mutants of replication factors. By using these mutants, we have analysed the mode of association of replication factors to the origin of DNA replication on chromosomal DNA and have revealed that the molecular identity and the mode of assembly of ‘pre-initiation complex (pre-IC)’, which was proposed to exist temporally just before the initiation of DNA replication and was never proved that there. The assembly of pre-IC was mutually dependent on factors that constitute the pre-IC. Such mode of regulation might contribute to the biological robustness of the initiation reaction, and finally contribute to the precise regulation of cellular proliferation.

Report

(5 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (39 results)

All 2016 2015 2014 2013 2012 Other

All Int'l Joint Research (2 results) Journal Article (4 results) (of which Peer Reviewed: 4 results,  Acknowledgement Compliant: 2 results,  Open Access: 1 results) Presentation (24 results) (of which Int'l Joint Research: 2 results,  Invited: 7 results) Book (5 results) Remarks (4 results)

  • [Int'l Joint Research] Columbia University(米国vvvvv)

    • Related Report
      2015 Annual Research Report
  • [Int'l Joint Research] New Jersey Medical School(米国)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Conserved interaction of Ctf18-RFC with DNA polymerase ε is critical for maintenance of genome stability in saccharomyces cerevisiae.2016

    • Author(s)
      Okimoto H, Tanaka S, Araki H, Ohashi E, Tsurimoto T.
    • Journal Title

      Genes Cells.

      Volume: in press Issue: 5 Pages: 482-491

    • DOI

      10.1111/gtc.12356

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] iAID: an improved auxin-inducible degron system for the construction of a 'tight' conditional mutant in the budding yeast Saccharomyces cerevisiae.2015

    • Author(s)
      Tanaka S, Miyazawa-Onami M, Iida T, Araki H.
    • Journal Title

      Yeast

      Volume: 32 Issue: 8 Pages: 567-581

    • DOI

      10.1002/yea.3080

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Efficient initiation of DNA replication in eukaryotes requires Dpb11/TopBP1-GINS interaction2013

    • Author(s)
      Tanaka, S., Komeda, Y., Umemori, T., Kubota, Y., Takisawa, H. and Araki, H.
    • Journal Title

      Mol. Cell. Biol

      Volume: 33 Issue: 13 Pages: 2614-2622

    • DOI

      10.1128/mcb.00431-13

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Helicase activation and establishment of replication forks at chromosomal origins of replication2013

    • Author(s)
      Seiji Tanaka, Hiroyuki Araki
    • Journal Title

      Cold Spring Harbor perspectives in biology

      Volume: 5 Issue: 12 Pages: a010371-a010371

    • DOI

      10.1101/cshperspect.a010371

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Presentation] 複製開始反応における律速因子の高発現によるサイレンス化拮抗作用2015

    • Author(s)
      大浪 真由美、荒木 弘之、田中 誠司
    • Organizer
      BMB2015
    • Place of Presentation
      神戸市
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] Switch-like assembly of pre-initiation complex in the initiation of DNA replication2015

    • Author(s)
      大浪 真由美、荒木 弘之、田中 誠司
    • Organizer
      DNA複製・組換え・修復ワークショップ
    • Place of Presentation
      静岡県焼津市
    • Year and Date
      2015-10-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] 染色体DNA複製開始とクロマチンの関係を考える2015

    • Author(s)
      田中 誠司
    • Organizer
      "国立遺伝学研究所・研究集会 「染色体DNAの安定維持の分子メカニズム」"
    • Place of Presentation
      静岡県三島市
    • Year and Date
      2015-10-01
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 染色体DNA複製開始反応における律速因子の高発現によるサイレンス化拮抗作用2015

    • Author(s)
      大浪 真由美、荒木 弘之、田中 誠司
    • Organizer
      日本遺伝学会第87回大会
    • Place of Presentation
      仙台市
    • Year and Date
      2015-09-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] Dissection of the initiation reaction of DNA replication in the budding yeast Saccharomyces cerevisiae2015

    • Author(s)
      Seiji Tanaka
    • Organizer
      cold Spring Harbor Laboratory meeting: Eukaryotic DNA Replication & Genome Maintenance 2015
    • Place of Presentation
      Cold Spring Harbor, NY(USA)
    • Year and Date
      2015-09-01
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Dissection of the initiation reaction of DNA replication by systematic chromatin immunoprecipitation2015

    • Author(s)
      Seiji Tanaka
    • Organizer
      EMBO Conference, DNA replication, chromosome segregation and cell division
    • Place of Presentation
      Royal Holloway, University of London, Egham, Surrey TW20 0EX, UK
    • Year and Date
      2015-07-27
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ここまで来た! 酵母のタイトな変異体作製法2014

    • Author(s)
      田中 誠司
    • Organizer
      第187回酵母細胞研究会例会
    • Place of Presentation
      東京大学大学院農学生命科学研究科 フードサイエンス棟 中島董一郎記念ホール、東京都文京区
    • Year and Date
      2014-12-12
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 網羅的なChIPによるDNA複製開始反応の詳細な解析2014

    • Author(s)
      田中 誠司
    • Organizer
      第37回日本分子生物学会年会 ワークショップ
    • Place of Presentation
      パシフィコ横浜、神奈川県横浜市
    • Year and Date
      2014-11-27
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Molecular mechanism that ensures bidirectional initiation of chromosomal DNA replication in budding yeast2014

    • Author(s)
      荒木 弘之
    • Organizer
      The 9th 3R Symposium (International Symposium on DNA Replication, Recombination and Repair)
    • Place of Presentation
      御殿場高原ホテル、静岡県御殿場市
    • Year and Date
      2014-11-21
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Dissection of the initiation reaction of DNA replication by systematic chromatin immunoprecipitation2014

    • Author(s)
      田中 誠司
    • Organizer
      The 9th 3R Symposium (International Symposium on DNA Replication, Recombination and Repair)
    • Place of Presentation
      御殿場高原ホテル、静岡県御殿場市
    • Year and Date
      2014-11-20
    • Related Report
      2014 Annual Research Report
  • [Presentation] DNA複製開始因子によるクロマチン構造変換制御2014

    • Author(s)
      田中 誠司
    • Organizer
      大阪大学蛋白研セミナー:「染色体伝承の分子背景:複製から染色体分離まで」
    • Place of Presentation
      大阪大学蛋白質研究所、大阪府吹田市
    • Year and Date
      2014-09-25
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 改良オーキシンデグロン法(Improved auxin-inducible degron: iAID)によるタイトな酵母変異体の作製とDNA複製開始制御機構解明への適用2014

    • Author(s)
      田中 誠司
    • Organizer
      酵母フォーラム
    • Place of Presentation
      東京大学弥生講堂、東京都文京区
    • Year and Date
      2014-09-03
    • Related Report
      2014 Annual Research Report
  • [Presentation] Dissection of the initiation reaction of DNA replication by systematic chromatin immunoprecipitation2014

    • Author(s)
      田中 誠司
    • Organizer
      FASEB SRC Yeast Chromosome Structure, Replication and Segregation
    • Place of Presentation
      The Steamboat Grand, Steamboat Springs, CO, USA
    • Year and Date
      2014-07-17
    • Related Report
      2014 Annual Research Report
  • [Presentation] Connection between the initiation of DNA replication and structural change of chromatin2014

    • Author(s)
      Seiji Tanaka
    • Organizer
      International conference, Kyoto, 2014: Coupling of replication, repair and transcription, and their common mechanism of chromatin remodeling
    • Place of Presentation
      京都市
    • Related Report
      2013 Annual Research Report
  • [Presentation] Dpb11/TopBP1–GINS interaction is required for efficient initiation of DNA replication2013

    • Author(s)
      Tanaka S*, Komeda Y, Umemori T, Kubota Y, Takisawa H, Araki H.
    • Organizer
      cold Spring Harbor Laboratory meeting: Eukaryotic DNA Replication & Genome Maintenance 2013
    • Place of Presentation
      Cold Spring Harbor, NY. USA
    • Related Report
      2013 Annual Research Report
  • [Presentation] DNA複製開始制御とクロマチン構造変換の接点2013

    • Author(s)
      田中 誠司
    • Organizer
      情報•システム研究機構 新領域融合研究センター 地球生命システム学プロジェクトワークショップ 「微生物ゲノム情報によるパンゲノム解析と新規リソースとしての活用」
    • Place of Presentation
      静岡県下田市
    • Related Report
      2013 Annual Research Report
  • [Presentation] DNA複製開始制御とクロマチン構造変換の接点2013

    • Author(s)
      田中 誠司
    • Organizer
      遺伝研・研究会「染色体DNAの安定維持の分子メカニズム」
    • Place of Presentation
      静岡県三島市
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] DNA複製開始制御とクロマチン構造変換の接点2013

    • Author(s)
      田中 誠司、大浪 真由美、荒木 弘之
    • Organizer
      第36回日本分子生物学会年会 ワークショップ
    • Place of Presentation
      兵庫県神戸市
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Inter-BRCT region of Dpbll is a conserved GINS-interaction domain and is important for the initiation of DNA replication2012

    • Author(s)
      Seiji Tanaka
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡国際会議場(福岡市)(招待講演)
    • Year and Date
      2012-12-13
    • Related Report
      2012 Annual Research Report
  • [Presentation] 出芽酵母染色体DNAの複製開始機構2012

    • Author(s)
      荒木弘之
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡国際会議場(福岡市)(招待講演)
    • Year and Date
      2012-12-13
    • Related Report
      2012 Annual Research Report
  • [Presentation] Efficient initiation of DNA replication requires evolutionarily conserved Dpbll-GINS interaction2012

    • Author(s)
      Seiji Tanaka
    • Organizer
      The 8th 3R synposium
    • Place of Presentation
      淡路夢舞台(兵庫県洲本市)
    • Year and Date
      2012-11-27
    • Related Report
      2012 Annual Research Report
  • [Presentation] 真核細胞の染色体DNA複製開始反応の過程はどの程度保存されているのか?2012

    • Author(s)
      田中誠司
    • Organizer
      遺伝研研究集会「遺伝情報の安定性を支える分子メカニズム」
    • Place of Presentation
      国立遺伝学研究所(静岡県三島市)(招待講演)
    • Year and Date
      2012-10-03
    • Related Report
      2012 Annual Research Report
  • [Presentation] Inter-BRCT region of DPB11 is a conserved GINS interaction domain, which is important for the initiation of DNA replication.2012

    • Author(s)
      田中誠司
    • Organizer
      2012年 関東東海DNA研究会
    • Place of Presentation
      山梨県忍野村
    • Year and Date
      2012-08-28
    • Related Report
      2012 Annual Research Report
  • [Presentation] Inter-BRCT region of DPB11 is a conserved GINS interaction domain, which is important for the initiation of DNA replication.2012

    • Author(s)
      Seiji Tanaka
    • Organizer
      2012 FASEB Summer Research Conferences "Yeast Chromosome Structure, Replication & Segregation"
    • Place of Presentation
      Steamboat Springs,CO, USA
    • Year and Date
      2012-07-17
    • Related Report
      2012 Annual Research Report
  • [Book] The Initiation of DNA Replication in Eukaryotes2016

    • Author(s)
      Seiji Tanaka, Hiroyuki Araki
    • Publisher
      Springer
    • Related Report
      2015 Annual Research Report
  • [Book] The Initiation of DNA Replication in Eukaryotes, edited by Daniel L. Kaplan2015

    • Author(s)
      Seiji Tanaka, Hiroyuki Araki
    • Publisher
      Springer
    • Related Report
      2014 Annual Research Report
  • [Book] DNA Replication (Chapter 6. Helicase Activation and Establishment of Replication Forks at Chromosomal Origins of Replication)2013

    • Author(s)
      Tanaka S, Araki H
    • Total Pages
      561
    • Publisher
      Cold Spring Harbor Laboratory Press
    • Related Report
      2013 Annual Research Report
  • [Book] 遺伝子図鑑(3-2 細胞周期)2013

    • Author(s)
      田中誠司
    • Total Pages
      263
    • Publisher
      悠書館
    • Related Report
      2013 Annual Research Report
  • [Book] DNA Replication ISBN 978-1-936113-48-42013

    • Author(s)
      Seiji Tanaka
    • Publisher
      Cold Spring Harbor Laboratory Press
    • Related Report
      2012 Annual Research Report
  • [Remarks] 国立遺伝学研究所・微生物遺伝研究部門・荒木研究室

    • URL

      http://www.nig.ac.jp/section/araki/araki-j.html

    • Related Report
      2013 Annual Research Report
  • [Remarks] 荒木研究室

    • URL

      http://www.nig.ac.jp/labs/MicGen/index.html

    • Related Report
      2013 Annual Research Report
  • [Remarks] DNA複製:真核生物間で保存された、効率よい複製開始のためのタンパク間相互作用

    • URL

      http://www.nig.ac.jp/Research-Highlights/1170/1233.html

    • Related Report
      2013 Annual Research Report
  • [Remarks]

    • URL

      http://www.nig.ac.jp/labs/Micgen/index.html

    • Related Report
      2012 Annual Research Report

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Published: 2012-04-24   Modified: 2022-01-27  

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