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GENETIC STUDY ON BACTERIAL COLONY FORMATION USING A COLONIZATION-DEFECTIVE MUTANT

Research Project

Project/Area Number 24380044
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Applied microbiology
Research InstitutionThe University of Tokyo

Principal Investigator

MASAKI HARUHIKO  東京大学, 農学生命科学研究科, 教授 (50134515)

Co-Investigator(Kenkyū-buntansha) SHIGEMATSU Toru  新潟薬科大学, 応用生命科学部, 教授 (10315286)
Project Period (FY) 2012-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥18,330,000 (Direct Cost: ¥14,100,000、Indirect Cost: ¥4,230,000)
Fiscal Year 2014: ¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2013: ¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2012: ¥10,270,000 (Direct Cost: ¥7,900,000、Indirect Cost: ¥2,370,000)
Keywordsバクテリア / 大腸菌 / 温度感受性変異 / コロニー / 増殖 / 固体培養 / 液体培養 / 不飽和脂肪酸 / 脂肪酸合成 / セルレニン / オレイン酸 / VBNC / 液体培地 / 固体培地 / 寒天培地 / ゲランガム / 好気呼吸 / 電子伝達系 / 難培養細菌 / VNC / コロニー形成
Outline of Final Research Achievements

Colony formation is a basic method for bacterial isolation and counting. But most natural live bacteria cannot be cultured due to low colony formation. Obviously being alive does not mean being able to form colonies, however, the difference is little understood in terms of gene expression. To gain a genetic insight into colony formation, we isolated a colonization-defective Escherichia coli mutant. The mutant was unable to synthesize unsaturated fatty acids. This mutant requires oleic acid for growth, but with a limited supply of oleic acid, its growth on solid medium was more sensitively and seriously impaired than in liquid medium. Enxymatical inhibition of fatty acid synthesis by cerulenin also impaired growth more seriously in solid cultures than liquid cultures of both wild-type E. coli and Bacullus subtilis. The depletion of fatty acids in the environment is probably one of the causes of low colony formation, which can be improved by fatty acid supplementation.

Report

(5 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (19 results)

All 2016 2015 2014 2013

All Journal Article (6 results) (of which Peer Reviewed: 6 results) Presentation (12 results) (of which Invited: 1 results) Book (1 results)

  • [Journal Article] Transfer-messenger RNA and SmpB mediate bacteriostasis in Escherichia coli cells against tRNA cleavage.2015

    • Author(s)
      Sakai, F., Sugita,R., Chang, J.-W., Ogawa, T., Hidaka, M., Masaki, H.
    • Journal Title

      Microbiology

      Volume: 161 Issue: 10 Pages: 2019-2028

    • DOI

      10.1099/mic.0.000144

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Transition of serine residues to the D-form during the conversion of ovalbumin into heat stable S-ovalbumin.2015

    • Author(s)
      Miyamoto, T., Takahashi, N., Sekine, M., Ogawa, T., Hidaka, M., Homma, H., Masaki, H.
    • Journal Title

      J. Pharm. Biomed. Anal.

      Volume: 116 Pages: 145-149

    • DOI

      10.1016/j.jpba.2015.04.030

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Origin of D-amino acids detected in the acid hydrolysates of purified Escherichia coli ß-galactosidase.2015

    • Author(s)
      Miyamoto, T., Sekine, M., Ogawa, T., Hidaka, M., Homma, H., Masaki, H.
    • Journal Title

      J. Pharm. Biomed. Anal.

      Volume: 116 Pages: 105-108

    • DOI

      10.1016/j.jpba.2015.04.022

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] コロニー形成の遺伝学2014

    • Author(s)
      正木春彦
    • Journal Title

      IFO Research Communications

      Volume: 28 Pages: 15-20

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evidence for DNA cleavage caused by a transfer-tRNA-targeting toxin.2013

    • Author(s)
      Shigematsu, M., Ogawa, T., Tanaka, W., Takahashi, K., Kitamoto, H.K., Hidaka, M, and Masaki, H,
    • Journal Title

      PLoS ONE

      Volume: 8 Issue: 9 Pages: 75512-75512

    • DOI

      10.1371/journal.pone.0075512

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Importance ofcell-damage causing growth delay for high-pressure inactivation of Saccharomyces cerevisiae2013

    • Author(s)
      Masaru Nanba, Kazuki Nomura, Yusuke Nasuhara, Manabu Hayashi, Miyuki Kido, Mayumi Hayashi, Akinori Iguchi, Toru Shigematsu, Masao Hirayama, Shigeaki Ueno, Tomoyuki Fujii
    • Journal Title

      High Pressure Research

      Volume: 33 Issue: 2 Pages: 299-307

    • DOI

      10.1080/08957959.2013.781596

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Presentation] 低温飢餓条件でのコロニー形成能の低下を抑える大腸菌遺伝子の解析2016

    • Author(s)
      福嶋凡子,西尾優宏,髙丸玲子,小川哲弘,日髙真誠,正木春彦
    • Organizer
      日本農芸化学会2016年度大会
    • Place of Presentation
      札幌市
    • Year and Date
      2016-03-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] 大腸菌のコロニー形成能における遺伝子関与2015

    • Author(s)
      正木春彦
    • Organizer
      日本微生物生態学会第30回土浦大会
    • Place of Presentation
      土浦市
    • Year and Date
      2015-10-17
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] コロニー形成における 脂肪酸合成の重要性2015

    • Author(s)
      納庄一樹,三井智玄,池端佑仁,小川哲弘,日高真誠,正木春彦
    • Organizer
      日本微生物生態学会第30回土浦大会
    • Place of Presentation
      土浦市
    • Year and Date
      2015-10-17
    • Related Report
      2015 Annual Research Report
  • [Presentation] 大腸菌における脂肪酸供給不全とコロニー形成能の関係2015

    • Author(s)
      納庄一樹,三井智玄,池端佑仁,小川哲弘,日髙真誠,正木春彦
    • Organizer
      日本農芸化学会2015年度大会
    • Place of Presentation
      岡山
    • Year and Date
      2015-03-29
    • Related Report
      2014 Annual Research Report
  • [Presentation] 大腸菌のVBNC化を緩和する遺伝子の解析2015

    • Author(s)
      西尾優宏,髙丸玲子,小川哲弘,日髙真誠,正木春彦
    • Organizer
      日本農芸化学会2015年度大会
    • Place of Presentation
      岡山
    • Year and Date
      2015-03-29
    • Related Report
      2014 Annual Research Report
  • [Presentation] 大腸菌のVBNC化を緩和する2つの遺伝子の共働効果2015

    • Author(s)
      福嶋凡子,髙丸玲子,西尾優宏,小川哲弘,日髙真誠,正木春彦
    • Organizer
      日本農芸化学会2015年度大会
    • Place of Presentation
      岡山
    • Year and Date
      2015-03-29
    • Related Report
      2014 Annual Research Report
  • [Presentation] Escherichia coliのコロニー形成能に及ぼす培養条件および遺伝子欠損の影響2014

    • Author(s)
      伊藤俊輔、佐藤寛美、古寺和人、中島加奈子、木戸みゆ紀、林真由美、井口晃徳、重松亨
    • Organizer
      新潟県生物教育研究会第50回新津大会
    • Place of Presentation
      新潟
    • Year and Date
      2014-12-07
    • Related Report
      2014 Annual Research Report
  • [Presentation] 固体培地での生育能の低下した大腸菌変異株の分析2014

    • Author(s)
      納庄一樹、三井智玄、池端佑仁、小川哲弘、日高真誠、正木春彦
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      東京
    • Related Report
      2013 Annual Research Report
  • [Presentation] 大腸菌のVBNC化を緩和する遺伝子のスクリーニング2014

    • Author(s)
      高丸玲子、森本亜希子、西尾優宏、小川哲弘、日高真誠、正木春彦
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      東京
    • Related Report
      2013 Annual Research Report
  • [Presentation] 大腸菌のコロニー形成能を失った変異株の分析2013

    • Author(s)
      三井智玄(代 : 高丸玲子)
    • Organizer
      日本農芸化学会2013年度大会
    • Place of Presentation
      仙台(宮城)
    • Year and Date
      2013-03-26
    • Related Report
      2012 Annual Research Report
  • [Presentation] 高圧力発酵制御を目的とした酵母Saccharomyces cerevisiaeの圧力耐性・感受性変異株の解析2013

    • Author(s)
      重松亨,南波優,野村一樹,長谷川敏美,井口晃徳
    • Organizer
      日本高圧力学会第54回高圧討論会
    • Place of Presentation
      新潟
    • Related Report
      2013 Annual Research Report
  • [Presentation] Saccharomyces cerevisiae UV変異株の損傷からの回復を考慮した圧力死滅挙動解析2013

    • Author(s)
      井口晃徳、南波優、野村一樹、齋木朋恵、木戸みゆ紀、林真由美、重松亨
    • Organizer
      第18回生物関連高圧研究会シンポジウム
    • Place of Presentation
      岐阜
    • Related Report
      2013 Annual Research Report
  • [Book] 西海理之監修「進化する食品高圧加工技術―基礎から最新の応用事例まで―」2013

    • Author(s)
      重松亨(第2編第2章第3節「酵母の圧力耐性・感受性株の作出」pp.221-228分担)
    • Total Pages
      318
    • Publisher
      エヌ・ティー・エス
    • Related Report
      2013 Annual Research Report

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Published: 2012-04-24   Modified: 2019-07-29  

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