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Understanding of the mechanism of the plant biological clock based on comparison between molecular networks.

Research Project

Project/Area Number 24570007
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Genetics/Genome dynamics
Research InstitutionNagoya University

Principal Investigator

AOKI Setsuyuki  名古屋大学, 情報科学研究科, 准教授 (30283469)

Co-Investigator(Renkei-kenkyūsha) TERADA Tomoki  名古屋大学, 大学院工学研究科, 准教授 (20420367)
YAMASHINO Takashi  名古屋大学, 大学院生命農学研究科, 准教授 (00314005)
KITAYAMA Yoko  名古屋大学, 大学院理学研究科, 助教 (20444367)
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2014: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2013: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2012: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Keywords生物時計 / 生物リズム / 進化 / ヒメツリガネゴケ / 遺伝子破壊 / リン酸リレー / 概日リズム / 概日時計 / 基部植物 / 生物時計(概日時計) / 生物リズム(概日リズム) / 時計遺伝子 / レポーターアッセイ / トランジェントアッセイ
Outline of Final Research Achievements

The biological clock is an endogenous oscillation mechanism with a period of about one day, and it is an important adaptive mechanism to survive under day-night environmental cycles. In this study, we studied the molecular mechanisms of the clock of a model basal plant Physcomitrella patens, which diverged from higher plants including the model dicot Arabidopsis thaliana at leas 450 million years ago. By the comparison of the clock machineries between P. patens and A. thaliana,we unraveled the mechanisms shared in both plants, mainly consisting of member genes of CCA1 and PRR families and their interactions, and also a mechanism specific to the moss plant,which includes phosphorylation of PRR proteins. By these findings, understanding of the molecular mechanisms of the plant clocks and their evolutionary changes has been greatly facilitated.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (8 results)

All 2015 2014 2013 2012 Other

All Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (2 results) Book (3 results) Remarks (2 results)

  • [Journal Article] Synthesis of 2&prime;-Modified Cyclic Bis(3&prime;&ndash;5&prime;)diadenylic Acids (<i>c</i>-di-AMPs) and Their Promotion of Cell Division in a Freshwater Green Alga2012

    • Author(s)
      T. Tezuka
    • Journal Title

      Chemistry Letters

      Volume: 41 Issue: 12 Pages: 1723-1725

    • DOI

      10.1246/cl.2012.1723

    • NAID

      130004426483

    • ISSN
      0366-7022, 1348-0715
    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] パーティクルガンを用いたトランジェントアッセイによるヒメツリガネゴケの生物時計遺伝子の発現解析2015

    • Author(s)
      龍昌志、一瀬瑞穂、杉田護、青木摂之
    • Organizer
      第56回日本植物生理学会年会
    • Place of Presentation
      世田谷区、東京農業大学世田谷キャンパス
    • Year and Date
      2015-03-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] ヒメツリガネゴケの生物時計遺伝子の発現解析2014

    • Author(s)
      龍昌志、出口大和、手塚裕紀、青木摂之
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山市、富山大学五福キャンパス
    • Related Report
      2013 Research-status Report
  • [Book] Plant Circadian Networks (Methods in Molecular Biology, Vol. 1158)2014

    • Author(s)
      Setsuyuki Aoki, Ryo Okada and Santosh B. Satbhai.
    • Publisher
      Humana Press
    • Related Report
      2014 Annual Research Report
  • [Book] Plant Circadian Networks2014

    • Author(s)
      Setsuyuki Aoki, Ryo Okada and Santosh B. Satbhai
    • Publisher
      Humana Press
    • Related Report
      2013 Research-status Report
  • [Book] Plant Circadian Networks (Methods in Molecular Biology series)2013

    • Author(s)
      Setsuyuki Aoki, Ryo Okada and Santosh B. Satbhai
    • Publisher
      Humana Press
    • Related Report
      2012 Research-status Report
  • [Remarks] 青木研ホームページ

    • URL

      http://inforhythmlab.jimdo.com

    • Related Report
      2014 Annual Research Report
  • [Remarks] 名古屋大学大学院情報科学研究科・青木研HP

    • URL

      http://www.info.human.nagoya-u.ac.jp/~aoki/

    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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