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Investigation on the origin and evolution of the multicellular body plan in plants by focusing on the charophycean algal genomes

Research Project

Project/Area Number 24570100
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Biodiversity/Systematics
Research InstitutionKobe University

Principal Investigator

SAKAYAMA Hidetoshi  神戸大学, 理学(系)研究科(研究院), 講師 (60391108)

Co-Investigator(Kenkyū-buntansha) NISHIYAMA Tomoaki  金沢大学, 学際科学実験センター, 助教 (50390688)
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2014: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2013: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2012: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywords生物学 / 進化 / 比較ゲノム / 多細胞体制 / 植物 / シャジクモ藻類 / 生物進化 / ゲノム / 国際情報交換、アメリカ合衆国
Outline of Final Research Achievements

In order to investigate the origin and evolution of the multicellular body plan in land plants and charophycean algae, in this study, we compared their multicellular gametophyte and sporophyte generations based on their genes and genomes. We identified shared genes among land plants and charophycean algae, as well as homologues of the important developmental genes, which have been identified in model species of land plants, from charophycean algae. Moreover, we explored the expression/function of these developmental genes in charalean algae and discussed the origin and evolution of the multicellular body plan in land plants and charophycean algae.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (41 results)

All 2015 2014 2013 2012 Other

All Journal Article (6 results) (of which Peer Reviewed: 5 results,  Acknowledgement Compliant: 2 results) Presentation (31 results) (of which Invited: 5 results) Book (4 results)

  • [Journal Article] Taxonomy, morphology and genetic variation of Nitella flexilis var. bifurcata (Charales, Characeae) from Japan2015

    • Author(s)
      Sakayama, H., Kai, A, Nishiyama, M., Watanabe, M. M., Kato, S., Ito, M., Nozaki, H. and Kawai, H.
    • Journal Title

      Phycological Research

      Volume: in press

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Occurence of the endangered species Nitellopsis obtusa (Charales, Charophyceae) in western Japan and the genetic differences within and among Japanese populations2014

    • Author(s)
      Kato, S., Kawai, H., Takimoto, M., Suga, H., Yohda, K., Horiya, K., Higuchi, S., & Sakayama, H.
    • Journal Title

      Phycological Research

      Volume: 62 Issue: 3 Pages: 222-227

    • DOI

      10.1111/pre.12057

    • Related Report
      2014 Annual Research Report 2013 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Characterization of sexual reproductive processes in Chara braunii (Charales, Charophyceae)2014

    • Author(s)
      Sato, M., Sakayama, H., Sato, M., Ito, M. & Sekimoto, H.
    • Journal Title

      Phycological Research

      Volume: in press

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Molecular and biochemical analysis of the first ARA6 homolog, a Rab5 GTPase, from green algae2013

    • Author(s)
      Hoepflinger, M., Geretschlaeger, A., Hoeftberger, M., Sommer, A., Nishiyama, T., Sakayama, Hammerl, P., H., Tenhaken, R., Ueda, T., Foissner I.
    • Journal Title

      J. Exp. Bot.

      Volume: 64 Issue: 18 Pages: 5553-68

    • DOI

      10.1093/jxb/ert322

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Characterization of the heterotrimeric G-protein complex and its regulator from the green alga Chara braunii expands the evolutionary breadth of plant G-protein signaling2013

    • Author(s)
      Hackenberg, D., Sakayama, H., Nishiyama, T., & Pandey, S.
    • Journal Title

      Plant Physiology

      Volume: 163 Issue: 4 Pages: 1510-1517

    • DOI

      10.1104/pp.113.230425

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] 植物の陸上化ー陸上植物の姉妹群シャジクモから見えてくるもの2013

    • Author(s)
      坂山英俊
    • Journal Title

      遺伝

      Volume: 67(1) Pages: 31-38

    • Related Report
      2012 Research-status Report
  • [Presentation] シャジクモの遺伝地図構築に向けたジェノタイピングを用いた交配実験系の確立2015

    • Author(s)
      宮田大輔・西山智明・川井浩史・坂山英俊
    • Organizer
      日本藻類学会第39回大会
    • Place of Presentation
      九州大学箱崎キャンパス(福岡県福岡市)
    • Year and Date
      2015-03-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] The Chara braunii genome2015

    • Author(s)
      Nishiyama, T., Toyoda, A., Suzuki, Y., Fujiyama, A., Rensing, S. A. & Sakayama, H.
    • Organizer
      International Symposium on Genome Science 2015
    • Place of Presentation
      一橋講堂(東京都千代田区)
    • Year and Date
      2015-01-20 – 2015-01-21
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] The Chara braunii genome sheds light on the origin of land plants2015

    • Author(s)
      Sakayama, H., Toyoda, A., Suzuki, Y., Fujiyama, A., Rensing, S. A. & Nishiyama, T.
    • Organizer
      International Plant & Animal Genome XXIII Conference
    • Place of Presentation
      San Diego, USA
    • Year and Date
      2015-01-10 – 2015-01-14
    • Related Report
      2014 Annual Research Report
  • [Presentation] The Chara braunii genome2015

    • Author(s)
      Nishiyama, T., Toyoda, A., Suzuki, Y., Fujiyama, A., Rensing, S. A. & Sakayama, H.
    • Organizer
      International Plant & Animal Genome XXIII Conference
    • Place of Presentation
      San Diego, USA
    • Year and Date
      2015-01-10
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] De novo assembly and analysis of RNA-seq data from charalean alga, Chara braunii2014

    • Author(s)
      Sakayama, H. & Nishiyama, T.
    • Organizer
      Marchantia Workshop
    • Place of Presentation
      神戸大学六甲台キャンパス(兵庫県神戸市)
    • Year and Date
      2014-12-08 – 2014-12-10
    • Related Report
      2014 Annual Research Report
  • [Presentation] 再発見された絶滅種チュウゼンジフラスコモの形態、遺伝的多様性および分類2014

    • Author(s)
      坂山英俊・甲斐 厚・西山未理・渡邉 信・加藤 将・伊藤元己・野崎久義・川井浩史
    • Organizer
      日本植物学会第76会大会
    • Place of Presentation
      明治大学生田キャンパス(神奈川県川崎市)
    • Year and Date
      2014-09-14
    • Related Report
      2014 Annual Research Report
  • [Presentation] シャジクモゲノムにみる陸上植物の制御因子ホモログ2014

    • Author(s)
      西山智明・豊田 敦・鈴木穣・藤山秋佐夫・坂山英俊
    • Organizer
      日本植物学会第76会大会
    • Place of Presentation
      明治大学生田キャンパス(神奈川県川崎市)
    • Year and Date
      2014-09-12
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 植物細胞リン酸輸送機構とその進化について2014

    • Author(s)
      藤原ひとみ・大西美輪・坂山英俊・石崎公庸・豊倉浩一・関本弘之・西山智明・七條千津子・小菅桂子・深城英弘・三村徹郎
    • Organizer
      日本植物学会第76会大会
    • Place of Presentation
      明治大学生田キャンパス(神奈川県川崎市)
    • Year and Date
      2014-09-12
    • Related Report
      2014 Annual Research Report
  • [Presentation] 陸上植物に近縁な緑色藻類シャジクモのゲノム解読とアノテーション2014

    • Author(s)
      西山智明・豊田 敦・鈴木 穣・藤山秋佐夫・坂山英俊
    • Organizer
      日本進化学会第16回大会
    • Place of Presentation
      高槻現代劇場(大阪府高槻市)
    • Year and Date
      2014-08-22
    • Related Report
      2014 Annual Research Report
  • [Presentation] Genome sequencing of the charophycean green alga, Chara braunii2014

    • Author(s)
      Tomoaki Nishiyama, Atsushi Toyoda, Yutaka Suzuki, Asao Fujiyama and Hidetoshi Sakayama
    • Organizer
      Plant & Animal Genomes XXII
    • Place of Presentation
      サンディエゴ
    • Related Report
      2013 Research-status Report
  • [Presentation] 絶滅危惧車軸藻類ホシツリモの新産地発見2012

    • Author(s)
      加藤将・須賀瑛文・養田勝則・堀家健司・滝本雅之・川井浩史・坂山英俊
    • Organizer
      日本植物学会第76会大会
    • Place of Presentation
      兵庫県立大学、姫路
    • Related Report
      2012 Research-status Report
  • [Presentation] Characterization of the first ARA6 homolog, a Rab5 GTPase, from green algae possibly involved in wound healing2012

    • Author(s)
      Höpflinger Marion, Geretschläger Anja, Höftberger Margit, Sommer Aniela, Nishiyama Tomoaki, Sakayama Hidetoshi, Tenhaken Raimund, Ueda Takashi, Foissner Ilse
    • Organizer
      SEB Meeting 2012
    • Place of Presentation
      Salzburg, Austria
    • Related Report
      2012 Research-status Report
  • [Presentation] 陸上植物に近縁な藻類シャジクモのゲノム解読

    • Author(s)
      西山智明・豊田 敦・鈴木 穣・藤山秋佐夫・坂山英俊
    • Organizer
      日本植物学会第77会大会
    • Place of Presentation
      札幌、北海道大学
    • Related Report
      2013 Research-status Report
  • [Presentation] 広島県宮島で見つかったフラスコモダマシ(車軸藻綱,シャジクモ目)の形態と系統

    • Author(s)
      溝渕 綾・坪田博美・加藤 将・坂山英俊・関 太郎・向井誠二・半田信司
    • Organizer
      第38回日本藻類学会
    • Place of Presentation
      船橋、東邦大学
    • Related Report
      2013 Research-status Report
  • [Presentation] 愛媛県レッドデータブックに掲載予定の車軸藻類

    • Author(s)
      藤原陽一郎・加藤 将・坂山英俊・福岡 豪・小林真吾
    • Organizer
      第38回日本藻類学会
    • Place of Presentation
      船橋、東邦大学
    • Related Report
      2013 Research-status Report
  • [Presentation] 陸上植物に近縁な緑色藻類シャジクモのゲノム解読

    • Author(s)
      西山智明・豊田 敦・鈴木 穣・藤山秋佐夫・坂山英俊
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山、富山大学
    • Related Report
      2013 Research-status Report
  • [Presentation] 植物細胞リン酸輸送機構とその進化について

    • Author(s)
      藤原ひとみ・大西美輪・坂山英俊・石崎公庸・関本弘之・西山智明・七條千津子・深城英弘・三村徹郎
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山、富山大学
    • Related Report
      2013 Research-status Report
  • [Presentation] シャジクモのゲノム解読

    • Author(s)
      西山 智明・豊田 敦・鈴木 穣・藤山秋佐夫・坂山英俊
    • Organizer
      日本植物分類学会第13回大会
    • Place of Presentation
      熊本、熊本大学
    • Related Report
      2013 Research-status Report
  • [Presentation] De novo assembly and analysis of RNA-seq data from charalean algae Chara braunii

    • Author(s)
      Hidetoshi Sakayama and Tomoaki Nishiyama
    • Organizer
      Ectocarpus 2014
    • Place of Presentation
      神戸、神戸大学
    • Related Report
      2013 Research-status Report
  • [Presentation] Genome sequencing of the charophycean green alga, Chara braunii

    • Author(s)
      Tomoaki Nishiyama, Atsushi Toyoda, Yutaka Suzuki, Asao Fujiyama and Hidetoshi Sakayama
    • Organizer
      Ectocarpus 2014
    • Place of Presentation
      神戸、神戸大学
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] Evolutionary analyses on the two ecologically differentiated types of freshwater alga Chara braunii (Charales)

    • Author(s)
      Syou Kato, Hiroshi Kawai, Hidetoshi Sakayama
    • Organizer
      Ectocarpus 2014
    • Place of Presentation
      神戸、神戸大学
    • Related Report
      2013 Research-status Report
  • [Presentation] シャジクモ藻類シャジクモ(Chara braunii)におけるLEAFY遺伝子ホモログの発現解析

    • Author(s)
      坂山英俊・山田敏弘・西山智明・川井浩史・伊藤元己
    • Organizer
      日本藻類学会第37回大会
    • Place of Presentation
      山梨大学、甲府
    • Related Report
      2012 Research-status Report
  • [Presentation] 国立環境研究所におけるシャジクモ類保存の取り組み

    • Author(s)
      石本美和・森史・湯本康盛・坂山英俊・笠井文絵・河地正伸
    • Organizer
      日本藻類学会第37回大会
    • Place of Presentation
      山梨大学、甲府
    • Related Report
      2012 Research-status Report
  • [Presentation] 愛媛県で確認されたシャジクモ属(Chara)について

    • Author(s)
      藤原陽一郎・加藤将・坂山英俊・小林真吾
    • Organizer
      日本藻類学会第37回大会
    • Place of Presentation
      山梨大学、甲府
    • Related Report
      2012 Research-status Report
  • [Presentation] シャジクモ (Chara braunii) におけるEST-SSRマーカーの開発

    • Author(s)
      加藤将・永野萌・嶌田智・川井浩史・坂山 英俊
    • Organizer
      日本藻類学会第37回大会
    • Place of Presentation
      山梨大学、甲府
    • Related Report
      2012 Research-status Report
  • [Presentation] ゲノム解析から見たシャジクモ類の多細胞化進化

    • Author(s)
      坂山英俊・西山智明
    • Organizer
      日本植物学会第76会大会
    • Place of Presentation
      兵庫県立大学、姫路
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] 日本産車軸藻類の分類と生育分布の現状

    • Author(s)
      坂山英俊
    • Organizer
      水草研究会第34回大会
    • Place of Presentation
      愛媛県立博物館、西条
    • Related Report
      2012 Research-status Report
  • [Presentation] シャジクモ藻類シャジクモ(Chara braunii)のRNA-seq解析

    • Author(s)
      坂山英俊・西山智明
    • Organizer
      日本藻類学会第36回大会
    • Place of Presentation
      北海道大学、札幌
    • Related Report
      2012 Research-status Report
  • [Presentation] 車軸藻類Chara fibrosa群の分子系統学的解析

    • Author(s)
      柴田葵、加藤将、川井浩史、坂山英俊
    • Organizer
      日本藻類学会第36回大会
    • Place of Presentation
      北海道大学、札幌
    • Related Report
      2012 Research-status Report
  • [Presentation] シャジクモの保全遺伝学に向けたSSRマーカーの新規開発

    • Author(s)
      加藤将、川井浩史、坂山英俊
    • Organizer
      日本藻類学会第36回大会
    • Place of Presentation
      北海道大学、札幌
    • Related Report
      2012 Research-status Report
  • [Presentation] 沖縄本島における車軸藻類と淡水産大型紅藻類の産地報告

    • Author(s)
      比嘉敦・坂山英俊・加藤将・香村眞徳・熊野茂
    • Organizer
      日本藻類学会第36回大会
    • Place of Presentation
      北海道大学、札幌
    • Related Report
      2012 Research-status Report
  • [Book] シャジクモ科. レッドデータブック2014 –日本の絶滅のおそれのある野生生物–, 植物II (蘚苔類,藻類,地衣類,菌類) (環境省編)2015

    • Author(s)
      坂山英俊(分担執筆)
    • Total Pages
      580
    • Publisher
      ぎょうせい
    • Related Report
      2014 Annual Research Report
  • [Book] 車軸藻類.京都府レッドデータブック 2015 第2巻 (野生植物・菌類編)2015

    • Author(s)
      加藤 将・坂山英俊
    • Publisher
      京都府自然環境保全課
    • Related Report
      2014 Annual Research Report
  • [Book] レッドリストに載ったシャジクモ目藻類.藻類ハンドブック.2012

    • Author(s)
      坂山英俊
    • Publisher
      エヌ・ティー・エス
    • Related Report
      2012 Research-status Report
  • [Book] シャジクモ藻類(シャジクモ目).藻類ハンドブック.2012

    • Author(s)
      坂山英俊
    • Publisher
      エヌ・ティー・エス
    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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