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Identification and functional analysis of the GPI-anchored proteins involved in the germline niche formation of the nematode C. elegans

Research Project

Project/Area Number 24570165
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Functional biochemistry
Research InstitutionKyushu University

Principal Investigator

NOMURA Kazuya  九州大学, 理学(系)研究科(研究院), 准教授 (30150395)

Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2014: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2013: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2012: ¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
KeywordsGPIアンカー / 配偶子幹細胞 / 幹細胞ニッチ / 卵母細胞 / 配偶子 / PIGA / CGGDBデータベース / C. elegans / 体細胞分裂 / 減数分裂 / プロテオグリカン / 糖鎖 / 線虫 / 生殖幹細胞
Outline of Final Research Achievements

Inhibition of GPI-anchored protein (GPI-AP) synthesis of C. elegans results in severe germline abnormalities. By analyzing a deletion allele of the GPI-anchor synthesizing gene piga-1, we confirmed that the phenotypes were caused by the decrease of dividing germline stem cells (GSCs) at the distal end of the gonad where distal tip cell is providing Notch signal to maintain GSC niche. In this study, we studied GPI-APs enriched in the germline by biochemical analysis, by DNA microarray and RNA-Seq. We also examined RNAi phenotypes of all the GPI-AP genes to identify essential GPI-APs in the GSC niche. From these analyses, we identified seven different GPI-AP coding genes. Among them, two genes seem to be especially important. Thus, we isolated CRISPR-Cas9 mediated deletion allele of the two genes, and found that the germline formation was severely affected in the allele. We are examining the possible involvement of these two genes in the Notch signaling pathways of the GSCs.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (22 results)

All 2015 2014 Other

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (11 results) (of which Invited: 2 results) Book (4 results) Remarks (6 results)

  • [Journal Article] RNAi screening of human glycogene orthologs in the nematode Caenorhabditis elegans and the construction of the C. elegans glycogene database.2014

    • Author(s)
      Akiyoshi S, Nomura KH, Dejima K, Murata D, Matsuda A, Kanaki N, Takaki T, Mihara H, Nagaishi T, Furukawa S, Ando KG, Yoshina S, Mitani S, Togayachi A, Suzuki Y, Shikanai T, Narimatsu H, Nomura K.
    • Journal Title

      Glycobiology

      Volume: 25(1) Issue: 1 Pages: 8-20

    • DOI

      10.1093/glycob/cwu080

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] 線虫C. elegans糖鎖遺伝子機能の網羅的スクリーニングとデータベース化―C. elegans GlycoGene Database (CGGDB)の作製2014

    • Author(s)
      秋好紗弥香 et al., Kazuya Nomura
    • Organizer
      第87回日本生化学会
    • Place of Presentation
      京都
    • Year and Date
      2014-10-17
    • Related Report
      2014 Annual Research Report
  • [Presentation] モデル生物線虫で探る細菌毒素の作用メカニズム2014

    • Author(s)
      野村一也
    • Organizer
      第33回 日本糖質学会 ワークショップ
    • Place of Presentation
      名古屋
    • Year and Date
      2014-08-11
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 線虫C. elegansの生殖系列細胞におけるGPIアンカー型タンパク質の解析

    • Author(s)
      松田采子, 村田大輔, 野村和子, 秋好紗弥香, 出嶋克史, Lance Wells, Karen L. Abbott, 川崎 ナナ, 安藤恵子, 中台枝里子, 三谷昌平, 野村一也
    • Organizer
      第36回日本分子生物学会大会
    • Place of Presentation
      神戸
    • Related Report
      2013 Research-status Report
  • [Presentation] 線虫C. elegansにおけるヒト相同性糖鎖関連遺伝子の解析とそのデータベース(CGGDB)の構築

    • Author(s)
      秋好紗弥香, 野村和子, 出嶋克史, 村田大輔, 松田采子, 鹿内俊秀, 成松久, 野村一也
    • Organizer
      第36回日本分子生物学会大会
    • Place of Presentation
      神戸
    • Related Report
      2013 Research-status Report
  • [Presentation] 線虫 C.elegans でこそわかる糖鎖の機能の解析

    • Author(s)
      野村一也
    • Organizer
      生理研研究会 「構造の多様性に立脚した糖鎖機能の解明に向けて」
    • Place of Presentation
      岡崎
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] Analysis of GPI-anchored proteins indispensable for the germ cell development in C. elegans

    • Author(s)
      Ayako Matsuda, Daisuke Murata, Kazuko Nomura, Sayaka Akiyoshi, Katsufumi Dejima, Lance Wells, Karen L. Abbott, Nana Kawasaki, Keiko Gengyo-Ando, Eriko Nakadai, Shohei Mitani, Kazuya Nomura
    • Organizer
      The 3rd International Congress on Natural Sciences with Sisterhood Universities (ICNS2013)
    • Place of Presentation
      新潟
    • Related Report
      2013 Research-status Report
  • [Presentation] Studying Glycobiology: A New Biology for the 21st Century

    • Author(s)
      Kazuya Nomura
    • Organizer
      The 3rd International Congress on Natural Sciences with Sisterhood Universities (ICNS2013)
    • Place of Presentation
      新潟
    • Related Report
      2013 Research-status Report
  • [Presentation] GPI-anchor synthesis is indispensable for the germline development of the nematode Caenorhabditis elegans

    • Author(s)
      Daisuke Murata, Kazuko H. Nomura, Ayako Matsuda, Sayaka Akiyoshi, Katsufumi Dejima, Lance Wells, Karen L. Abbott, Nana Kawasaki, Keiko Gengyo-Ando, Eriko Kage-Nakadai, Shohei Mitani, Kazuya Nomura
    • Organizer
      GLYCO22 (the 22nd International Glycoconjugate Symposium )
    • Place of Presentation
      大連(中国)
    • Related Report
      2013 Research-status Report
  • [Presentation] GPI-anchor synthesis is indispensable for the germline development of the nematode Caenorhabditis elegans

    • Author(s)
      野村一也
    • Organizer
      The 22nd International Glycoconjugate Symposium
    • Place of Presentation
      大連、中華人民共和国
    • Related Report
      2012 Research-status Report
  • [Presentation] GPIアンカー合成は線虫 Caenorhabditis elegansの配偶子幹細胞ニッチの維持と生殖系列細胞発生に必須である

    • Author(s)
      野村一也
    • Organizer
      第85回日本生化学会大会
    • Place of Presentation
      福岡市
    • Related Report
      2012 Research-status Report
  • [Presentation] GPIアンカー型蛋白質の生合成は線虫C. elegansの生殖細胞発生に必須である

    • Author(s)
      野村一也
    • Organizer
      日本脂質生化学会
    • Place of Presentation
      福岡市
    • Related Report
      2012 Research-status Report
  • [Book] 「線虫でこそわかる糖鎖の新機能の探究」 糖鎖の新機能開発・応用ハンドブック~創薬・医療からヘルスケアまで2015

    • Author(s)
      野村一也、秋好紗弥香、松田采子、野村和子
    • Publisher
      NTS
    • Related Report
      2014 Annual Research Report
  • [Book] "The Role of Glycosaminoglycans and Glycosylphosphatidylinositol-Anchored Proteins in the Development of Caenorhabditis elegans", In “Glycoscience: Biology and Medicine” (Taniguchi N., Endo T., Hart GW., Seeberger PH., Wong C-H. (Eds.)2014

    • Author(s)
      Kazuya Nomura, Sayaka Akiyoshi, Ayako Matsuda, Kazuko H. Nomura
    • Total Pages
      1568
    • Publisher
      Springer-Japan
    • Related Report
      2014 Annual Research Report
  • [Book] Glycoscience: Biology and Medicine2014

    • Author(s)
      Kazuya Nomura, Sayaka Akiyoshi, Ayako Matsuda, and Kazuko H. Nomura
    • Publisher
      Springer
    • Related Report
      2013 Research-status Report
  • [Book] 糖鎖の新機能開発・応用ハンドブック~創薬・医療からヘルスケアまで(仮題)2014

    • Author(s)
      野村一也、秋好紗弥香、松田采子、野村和子
    • Publisher
      NTS出版
    • Related Report
      2013 Research-status Report
  • [Remarks] 野村研究室のホームページ

    • URL

      http://seibutsu.biology.kyushu-u.ac.jp/~nomura/index.html

    • Related Report
      2014 Annual Research Report
  • [Remarks] 科学を学ぶ人のために

    • URL

      http://seibutsu.biology.kyushu-u.ac.jp/~nomura/diary/diary_index.htm

    • Related Report
      2014 Annual Research Report
  • [Remarks] 九州大学学術情報リポジトリへの関連論文の登録

    • URL

      http://catalog.lib.kyushu-u.ac.jp/ja/recordID/835915

    • Related Report
      2013 Research-status Report
  • [Remarks] 野村研究室のホームページ

    • URL

      http://seibutsu.biology.kyushu-u.ac.jp/~nomura/index.html

    • Related Report
      2013 Research-status Report
  • [Remarks] 九州大学学術情報リポジトリへの関連論文の登録

    • URL

      https://qir.kyushu-u.ac.jp/dspace/handle/2324/21716

    • Related Report
      2012 Research-status Report
  • [Remarks] 野村研究室のホームページ

    • URL

      http://seibutsu.biology.kyushu-u.ac.jp/~nomura/index.html

    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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