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Elucidation of a whole transcriptional control network concerning environmental response by creation of an artificial ancestor cell

Research Project

Project/Area Number 24580101
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Applied microbiology
Research InstitutionSaitama University

Principal Investigator

ASAI Kei  埼玉大学, 理工学研究科, 准教授 (70283934)

Co-Investigator(Renkei-kenkyūsha) YOSHIKAWA Hirofumi  東京農業大学, 応用生物科学部, 教授 (50175676)
Project Period (FY) 2012-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2013: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2012: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords転写制御 / シグマ因子 / 細胞死 / ストレス応答 / 枯草菌
Outline of Final Research Achievements

We aimed at elucidation of whole transcriptional control mechanism for bacterial stress response. The bacillus cells where 18 sigma factors out of all 19 were inactivated was created (the stain of sigma-A only) and it was revealed that only one essential sigma factor was enough to grow. The vegetative growth of the stain of sigma-A only is identical to that of the wild type strain in a nutritionally rich medium, but interestingly the turbidity of the cells are reduced after the exponential growth phase suggesting that autolysis of the cells is occurred. Suppressor mutants which escaped cell lysis were obtained and their location of mutation was analyzed. Together all this data, it was suggested that novel mechanism for cell survival at stationary phase, in which transcription and translation were closely related.

Report

(5 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (27 results)

All 2016 2015 2014 2013 2012

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (23 results) (of which Int'l Joint Research: 1 results,  Invited: 2 results) Book (1 results)

  • [Journal Article] SP10 infectivity is aborted after bacteriophage SP 10 inlfection induces nonA transcription on the prophage SPβ region of the Bacillus subtilis genome2014

    • Author(s)
      Yamamoto T, Obana N, Yee LM, Asai K. Nomura N. Nakamura K.
    • Journal Title

      Journal of Bacteriology

      Volume: 196 Issue: 3 Pages: 693-706

    • DOI

      10.1128/jb.01240-13

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] A putative bactoprenol glycosyltransferase, CsbB, in Bacillus subtilis activates SigM in the absence of2013

    • Author(s)
      Inoue H, Suzuki D, Asai K.
    • Journal Title

      Biochem Biophys Res Commun.

      Volume: 436 Issue: 1 Pages: 6-11

    • DOI

      10.1016/j.bbrc.2013.04.064

    • Related Report
      2013 Research-status Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Induction of extracytoplasmic function sigma factors in Bacillus subtiliscells with defects in lipoteichoic acid synthesis2013

    • Author(s)
      Hashimoto, M., T. Seki, S. Matsuoka, H. Hara, K. Asai, Y. Sadaie, and K. Matsumoto
    • Journal Title

      Microbiology

      Volume: 159(1) Issue: Pt_1 Pages: 23-35

    • DOI

      10.1099/mic.0.063420-0

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] 熱耐性と胞子形成に関与する枯草菌rpoC 遺伝子の新規機能解析2016

    • Author(s)
      高松美沙樹
    • Organizer
      日本農芸化学会2016年度大会
    • Place of Presentation
      札幌コンベンションセンター(北海道札幌市)
    • Year and Date
      2016-03-30
    • Related Report
      2015 Annual Research Report
  • [Presentation] Analysis of mechanism of stress response induced with the plant essential oils in Bacillus subtilis2015

    • Author(s)
      小澤良基
    • Organizer
      The 14th Asian Conference on Transcription(国際学会)
    • Place of Presentation
      National University of Singapore(Singapore)
    • Year and Date
      2015-12-03
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 枯草菌シグマ因子最少化株の表現型の解析2015

    • Author(s)
      吉田早希
    • Organizer
      日本遺伝学会第87回大会
    • Place of Presentation
      東北大学川内北キャンパス(宮城県仙台市)
    • Year and Date
      2015-09-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] 枯草菌SigIの定常期における役割2015

    • Author(s)
      清水葉子
    • Organizer
      日本遺伝学会第87回大会
    • Place of Presentation
      東北大学川内北キャンパス(宮城県仙台市)
    • Year and Date
      2015-09-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] 植物香気成分の枯草菌ストレス応答に与える影響の解析2015

    • Author(s)
      小澤良基
    • Organizer
      日本遺伝学会第87回大会
    • Place of Presentation
      東北大学川内北キャンパス(宮城県仙台市)
    • Year and Date
      2015-09-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] イソプレノイド合成経路を代謝改変した大腸菌変異株における鉄硫黄クラスター生合成系の機能解析2015

    • Author(s)
      田中 尚志、金澤 美秋、葛山 智久、朝井 計、高橋 康弘
    • Organizer
      日本農芸化学会2015年度大会
    • Place of Presentation
      岡山大学 津島キャンパス(岡山市北区津島中)
    • Year and Date
      2015-03-26 – 2015-03-29
    • Related Report
      2014 Research-status Report
  • [Presentation] 枯草菌における鉄硫黄クラスター生合成オペロン(sufCDSUB)破壊株の構築と異種間での相補解析2015

    • Author(s)
      横山 奈央、丸山 ちひろ、野中 ちひろ、葛山 智久、朝井 計、高橋 康弘
    • Organizer
      日本農芸化学会2015年度大会
    • Place of Presentation
      岡山大学 津島キャンパス(岡山市北区津島中)
    • Year and Date
      2015-03-26 – 2015-03-29
    • Related Report
      2014 Research-status Report
  • [Presentation] 枯草菌の定常菌の細胞死におけるSigIシグマ因子の役割2015

    • Author(s)
      朝井 計、清水 葉子、吉川 博文
    • Organizer
      日本農芸化学会2015年度大会
    • Place of Presentation
      岡山大学 津島キャンパス(岡山市北区津島中)
    • Year and Date
      2015-03-26 – 2015-03-29
    • Related Report
      2014 Research-status Report
  • [Presentation] ベチバー抽出物の枯草菌のストレス応答機構に与える影響の解析2015

    • Author(s)
      小澤 良基、今泉 優、吉川 博文、長谷川 登志夫、朝井 計
    • Organizer
      日本農芸化学会2015年度大会
    • Place of Presentation
      岡山大学 津島キャンパス(岡山市北区津島中)
    • Year and Date
      2015-03-26 – 2015-03-29
    • Related Report
      2014 Research-status Report
  • [Presentation] 枯草菌αオペロンの構造と発現の解析2015

    • Author(s)
      白川文教、池田宗太郎、朝井 計
    • Organizer
      第9回日本ゲノム微生物学会年会
    • Place of Presentation
      神戸大学六甲第2キャンパス(神戸市灘区六甲台町)
    • Year and Date
      2015-03-06 – 2015-03-08
    • Related Report
      2014 Research-status Report
  • [Presentation] 枯草菌αオペロン様の構造と発現の解析2014

    • Author(s)
      白川 文教、池田 宗太郎、朝井 計
    • Organizer
      日本遺伝学会第86回大会
    • Place of Presentation
      長浜バイオ大学(滋賀県長浜市)
    • Year and Date
      2014-09-17 – 2014-09-19
    • Related Report
      2014 Research-status Report
  • [Presentation] ベチバー抽出物の枯草菌のストレス応答機構に与える影響の解析2014

    • Author(s)
      小澤 良基、新城 優、長谷川 登志夫、朝井 計
    • Organizer
      日本遺伝学会第86回大会
    • Place of Presentation
      長浜バイオ大学(滋賀県長浜市)
    • Year and Date
      2014-09-17 – 2014-09-19
    • Related Report
      2014 Research-status Report
  • [Presentation] 香気性の植物抽出物の細菌の増殖に与える影響の解析2014

    • Author(s)
      朝井 計、小穴 秋弓、今泉 優、長谷川 登志夫
    • Organizer
      日本農芸化学会 2014 大会
    • Place of Presentation
      明治大学(東京)
    • Related Report
      2013 Research-status Report
  • [Presentation] ゲノム改造によるバクテリアのRNAポリメラーゼの多様性と互換性の解析2014

    • Author(s)
      朝井計、古園さおり、吉川博文
    • Organizer
      日本農芸化学会 2014 大会
    • Place of Presentation
      明治大学(東京)
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] Alternative Sigma Factor, SigI, responds to Cell Wall and DNA damage in Bacillus2014

    • Author(s)
      Mustuki Ichishima, Kazue Obata, and Kei Asai
    • Organizer
      The 13th Asian Conference on Transcription
    • Place of Presentation
      University College Melbourne, Australia
    • Related Report
      2013 Research-status Report
  • [Presentation] Determination of minimum number of the sigma factors required for growth in Bacillus subtilis.2014

    • Author(s)
      Noriko Ueki, Miwa Akiho, Takashi Matsumoto, Hirofumi Yoshikawa & Kei Asai
    • Organizer
      The 13th Asian Conference on Transcription
    • Place of Presentation
      University College Melbourne, Australia
    • Related Report
      2013 Research-status Report
  • [Presentation] 枯草菌の転写装置を解剖する試み2013

    • Author(s)
      朝井計、白川文教、松本貴嗣、古園さおり、吉川博文
    • Organizer
      「細胞を創る」研究会 6.0
    • Place of Presentation
      慶應義塾大学鶴岡キャンパス(山形)
    • Related Report
      2013 Research-status Report
  • [Presentation] 枯草菌シグマ因子SigIの定常期における機能解析2013

    • Author(s)
      朝井計、市島睦生
    • Organizer
      日本遺伝学会第85回大会
    • Place of Presentation
      慶應義塾大学日吉キャンパス(神奈川)
    • Related Report
      2013 Research-status Report
  • [Presentation] アーキア型膜脂質合成遺伝子群の枯草菌への導入2013

    • Author(s)
      中風呂裕樹、Yee Lii Mien、柘植 謙爾、朝井計
    • Organizer
      日本遺伝学会第85回大会
    • Place of Presentation
      慶應義塾大学日吉キャンパス(神奈川)
    • Related Report
      2013 Research-status Report
  • [Presentation] 枯草菌の溶菌を誘発する香気性の植物抽出物の解析2013

    • Author(s)
      小穴秋弓、新城優、長谷川登志夫、朝井計
    • Organizer
      日本遺伝学会第85回大会
    • Place of Presentation
      慶應義塾大学日吉キャンパス(神奈川)
    • Related Report
      2013 Research-status Report
  • [Presentation] 枯草菌SigIによる定常期における細胞維持機構の解析2013

    • Author(s)
      朝井計
    • Organizer
      日本農芸化学会2013年度大会
    • Place of Presentation
      東北大学
    • Related Report
      2012 Research-status Report
  • [Presentation] 細菌のシグマ因子の多様性の意義解明への遺伝学的アプローチ2012

    • Author(s)
      朝井計
    • Organizer
      日本遺伝学会第84回大会
    • Place of Presentation
      九州大学医学部
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Alternative Sigma Factor, SigI, Regulates the Cell Wall Metabolism in Concert with WalRK Two-Component Regulatory System in Bacillus subtilis2012

    • Author(s)
      Asai Kei
    • Organizer
      Asian and Oceanian Conference on transcription
    • Place of Presentation
      Jeju Island, Korea
    • Related Report
      2012 Research-status Report
  • [Book] Escherichia coli and Bacillus subtilis: The Frontiers of Molecular Microbiology Revisited2012

    • Author(s)
      Asai Kei
    • Total Pages
      362
    • Publisher
      Research Signpost
    • Related Report
      2012 Research-status Report

URL: 

Published: 2013-05-31   Modified: 2019-07-29  

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