• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Analysis of a novel bacterial organelle, oligobody in an extremely oligotrophic bacterium

Research Project

Project/Area Number 24580111
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Applied microbiology
Research InstitutionShizuoka University (2013-2014)
Nara Institute of Science and Technology (2012)

Principal Investigator

YOSHIDA Nobuyuki  静岡大学, 工学研究科, 准教授 (10273848)

Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2013: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2012: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords低栄養性細菌 / オリゴトローフ / ロドコッカス属 / 二酸化炭素 / オリゴボディー / 無機ポリリン酸 / 透過型電子顕微鏡観察 / oligotroph / Rhodococcus erythropolis / oligobody / inorganic polyphosphate / polyphosphate kinase / ポリリン酸 / oligo body / TEM
Outline of Final Research Achievements

Rhodococcus erythropolis N9T-4 can grow on a minimum salt medium without any additional carbon source and requires CO2 for its oligotrophic growth. This bacterium forms a unique bacterial organelle, oligobody under oligotrophic conditions. The formation of the oligobodies was not affected by additional carbon sources but the size became reduced when NH4Cl was used as a nitrogen source in a dose-dependent manner. Biochemical and TEM-EDX analyses showed that the component of the oligobody was inorganic polyphosphate. Genome analysis of N9T-4 revealed that two genes involved in synthesis and degradation of inorganic polyphosphate, ppk1 and ppk2, respectively. The oligobody formation was dramatically decreased in a ppk1-deletion mutant, while the growth of the mutant was the same level of that of the wild-type strain.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (9 results)

All 2015 2014 2013 Other

All Journal Article (2 results) (of which Peer Reviewed: 2 results) Presentation (7 results)

  • [Journal Article] The glyoxylate shunt is essential for CO2-requiring oligotrophic growth of Rhodococcus erythropolis N9T-42015

    • Author(s)
      Yano, T., Yoshida, N., Yu, F., Wakamatsu, M., and Takagi, H.
    • Journal Title

      Applied Microbiology and Biotechnology

      Volume: Epub ahead of print Issue: 13 Pages: 1-11

    • DOI

      10.1007/s00253-015-6500-x

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Utilization of atmospheric ammonia by an extremely oligotrophic bacterium, Rhodococcus erythropolis N9T-42014

    • Author(s)
      Yoshida, N., Inaba, S., and Takagi, H.
    • Journal Title

      Journal of Bioscience and Bioengineering

      Volume: 117 Issue: 1 Pages: 28-32

    • DOI

      10.1016/j.jbiosc.2013.06.005

    • NAID

      110009766600

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] 超低栄養性細菌 Rhodococcus erythropolis N9T-4 株が有する TCA バイパス経路の生化学的解析2014

    • Author(s)
      矢野 嵩典,吉田信行,高木 博史
    • Organizer
      第66回 日本生物工学会大会
    • Place of Presentation
      札幌コンベンションセンター(札幌市白石区東札幌6条1丁目1-1)
    • Year and Date
      2014-09-09 – 2014-09-11
    • Related Report
      2014 Annual Research Report
  • [Presentation] Biochemical studies on a unique carbon metabolism in an extremely oligotrophic bacterium, Rhodococcus erythropolis N9T-42014

    • Author(s)
      Yano, T., Yoshida, N., and Takagi, H.
    • Organizer
      JSPS Japanese-German Graduate Externship Program, BIOTECHNOLOGY AND CHEMISTRY FOR GREEN GROWTH
    • Place of Presentation
      千里ライフサイエンスセンター(大阪府豊中市)
    • Related Report
      2013 Research-status Report
  • [Presentation] Rhodococcus erythropolis N9T-4株が低栄養生育時に形成するオリゴボディーの機能解析2014

    • Author(s)
      藤好 拓也、永井 里奈、岩野 恵、西田 倫希、田口 英次、吉田 信行、高木 博史
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      明治大学生田キャンパス(神奈川県川崎市)
    • Related Report
      2013 Research-status Report
  • [Presentation] 超低栄養性細菌Rhodococcus erythropolis N9T-4株におけるTCAバイパス経路の解析2014

    • Author(s)
      矢野 嵩典、吉田 信行、高木 博史
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      明治大学生田キャンパス(神奈川県川崎市)
    • Related Report
      2013 Research-status Report
  • [Presentation] 超低栄養性細菌Rhodococcus erythropolis N9T-4 株に見出された新奇オルガネラ「オリゴボディー」の解析2013

    • Author(s)
      藤好 拓也、永井 里奈、岩野 恵、田口 英次、西田 倫希、吉田 信行、高木 博史
    • Organizer
      第65回 日本生物工学会大会
    • Place of Presentation
      広島国際会議場(広島県広島市)
    • Related Report
      2013 Research-status Report
  • [Presentation] 超低栄養性細菌Rhodococcus erythropolis N9T-4 株に見出された新奇オルガネラ「オリゴボディー」の解析

    • Author(s)
      藤好 拓也、岩野 恵、永井 里奈、西田 倫希、吉田 信行、高木 博史
    • Organizer
      日本農芸化学会関西支部会 第482 回 講演会
    • Place of Presentation
      神戸大学大学院農学研究科(兵庫県神戸市)
    • Related Report
      2013 Research-status Report
  • [Presentation] 超低栄養性細菌 Rhodococcus erythropolis N9T-4 株に見出された新奇オルガネラ、オリゴボディーの解析

    • Author(s)
      藤好 拓也、毛戸 香織、岩野 恵、永井 里奈、吉田 信行、高木 博史
    • Organizer
      日本生物工学会大会
    • Place of Presentation
      神戸国際会議場
    • Related Report
      2012 Research-status Report

URL: 

Published: 2013-05-31   Modified: 2019-07-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi