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Functional analysis and molecular basis of leucine as a biological regulator

Research Project

Project/Area Number 24580137
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Applied biochemistry
Research InstitutionThe University of Tokyo

Principal Investigator

TOMITA Takeo  東京大学, 生物生産工学研究センター, 助教 (50447364)

Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2013: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2012: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywordsロイシン / 生体調節因子 / 好熱菌 / グルタミン酸脱水素酵素 / シグナル伝達 / アロステリック調節 / グローバル調節 / タンパク質間相互作用 / アミノ酸代謝調節 / 転写調節
Outline of Final Research Achievements

Molecular partner of SraA, which was supposed to be a sensor of amino acid, was searched and we identified TrpD, a second enzyme on biosynthesis of tryptophan. We performed biochemical analyses and suggested that SraA sensed tryptophan, which was an end product of the biosynthetic pathway, and transmitted the signal toward TrpD to inhibit the activity. This is a novel mechanism for feedback inhibition of tryptophan biosynthetic pathway. We also found GDH interacted with a homolog of enzyme involved in purine biosynthetic pathway and indicated existence of a novel regulatory mechanism of intracellular metabolism.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (13 results)

All 2015 2014 2013 2012

All Presentation (13 results)

  • [Presentation] 高度好熱菌 Thermus thermophilus におけるアミノ酸シグナル応答機構の解析2015

    • Author(s)
      久保田哲央,松下 創,富田武郎,葛山智久,西山 真
    • Organizer
      日本農芸化学会2015年度大会
    • Place of Presentation
      岡山大学
    • Year and Date
      2015-03-26 – 2015-03-30
    • Related Report
      2014 Annual Research Report
  • [Presentation] Thermus thermophilus 由来アデニンホスホリボシルトランスフェラーゼホモログの構造・機能解析2015

    • Author(s)
      富田武郎,西山 真
    • Organizer
      日本農芸化学会2015年度大会
    • Place of Presentation
      岡山大学
    • Year and Date
      2015-03-26 – 2015-03-30
    • Related Report
      2014 Annual Research Report
  • [Presentation] Crystal structure and insight into extremely high glutamate production acivity of glutamate dehydrogenase from Corynebacterium glutamicum2014

    • Author(s)
      Takeo Tomita, Shugo Nakamura , and Makoto Nishiyama
    • Organizer
      Active enzyme molecule 2014
    • Place of Presentation
      富山国際会議場
    • Year and Date
      2014-12-17 – 2014-12-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] 高度好熱菌Thermus thermophilus におけるアミノ酸シグナル伝達機構の解析2014

    • Author(s)
      Tetsuo Kubota, Hajime Matsushita, Takeo Tomita, Tomohisa Kuzuyama, Makoto Nishiyama
    • Organizer
      第4回モデル生物丸ごと一匹学会
    • Place of Presentation
      大阪大学豊中キャンパス
    • Year and Date
      2014-09-26 – 2014-09-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] The first reaction intermediate complex of glutamate dehydrogenase2014

    • Author(s)
      Takeo Tomita, Makoto Nishiyama
    • Organizer
      ASBMB annual meeting
    • Place of Presentation
      San diego Convention Center
    • Year and Date
      2014-04-26 – 2014-04-30
    • Related Report
      2014 Annual Research Report
  • [Presentation] First reaction intermediate complex of glutamate dehydrogenase from Corynebacterium glutamicum2013

    • Author(s)
      Takeo Tomita, Makoto Nishiyama
    • Organizer
      International conference on structural genomics 2013
    • Place of Presentation
      京王プラザホテル(札幌)
    • Related Report
      2013 Research-status Report
  • [Presentation] Mechanism for hyper-sensitivity to lysine analogue of Thermus thermophilus HB272013

    • Author(s)
      Yuko Kanameru, Fumihito Hasebe, Takeo Tomita, Tomohisa Kuzuyama, Makoto Nishiyama
    • Organizer
      The 3rd Annual Meeting for Whole-Organizm Science society
    • Place of Presentation
      大阪大学豊中キャンパスシグマホール(大阪)
    • Related Report
      2013 Research-status Report
  • [Presentation] The first reaction intermediate complex of glutamate dehydrogenase from corynebacterium glutamicum2013

    • Author(s)
      Takeo Tomita
    • Organizer
      Enzyme Engineering XXII
    • Place of Presentation
      富山国際会議場(富山)
    • Related Report
      2013 Research-status Report
  • [Presentation] 高度好熱菌Thermus thermophilus におけるアミノ酸シグナル応答機構の解析2013

    • Author(s)
      久保田哲央、松下創、富田武郎、葛山智久、西山真
    • Organizer
      日本農芸化学会関東支部2013 年度支部大会
    • Place of Presentation
      慶應義塾大学日吉キャンパス・藤原洋記念ホール(横浜)
    • Related Report
      2013 Research-status Report
  • [Presentation] Corynebacterium glutamicum由来グルタミン酸脱水素酵素の結晶構造解析2013

    • Author(s)
      富田 武郎、イン ルル、葛山 智久、西山 真
    • Organizer
      日本農芸化学会2013年度大会
    • Place of Presentation
      東北大学(仙台)
    • Related Report
      2012 Research-status Report
  • [Presentation] LysRファミリー転写制御因子TTC1871の機能解析2013

    • Author(s)
      松下 創、富田 武郎、葛山 智久、西山 真
    • Organizer
      日本農芸化学会2013年度大会
    • Place of Presentation
      東北大学(仙台)
    • Related Report
      2012 Research-status Report
  • [Presentation] Substrate recognition mechanism of a homolog of homoisocitratedehydrogenase from Thermococcus kodakarensis, TK02802012

    • Author(s)
      ○Takeo Tomita, Yin Lu Lu, Kento Takahashi, Haruyuki Atomi, Tomohisa Kuzuyama, Makoto Nishiyama
    • Organizer
      第2回 モデル生物丸ごと一匹学会
    • Place of Presentation
      理化学研究所播磨研究所(播磨)
    • Related Report
      2012 Research-status Report
  • [Presentation] Functional analysis of TTC1871 LysR-type transcriptional regulator2012

    • Author(s)
      Matsushita Hajime, Takeo Tomita, Tomohisa Kuzuyama, Makoto Nishiyama
    • Organizer
      第2回 モデル生物丸ごと一匹学会
    • Place of Presentation
      理化学研究所播磨研究所(播磨)
    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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