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Analysis of genetic diversity of the extended MHC region of Japanese quail

Research Project

Project/Area Number 24580431
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Basic veterinary science/Basic zootechnical science
Research InstitutionTokyo University of Agriculture

Principal Investigator

HANZAWA Megumu  東京農業大学, 農学部, 教授 (00181032)

Co-Investigator(Renkei-kenkyūsha) HARA Hiromi  東京農業大学, 農学部, 助教 (00343567)
SHIINA Takashi  東海大学, 医学部, 准教授 (00317744)
HOSOMICHI Kazuyoshi  金沢大学, 医学部, 准教授 (50420948)
Research Collaborator MAEDA Yoshimi  
MIZUTANI Makoto  
MANNEN Hideyuki  
MILLER Marcia  
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2014: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2013: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2012: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywordsウズラ / MHC / TRIM / CD1 / DNA多型 / ハプロタイプ / 連鎖 / 組換え / LEI0258 / ニワトリ / ODF3
Outline of Final Research Achievements

1. TRIM sub-region and CD1 sub-region were identified in major histocompatibility complex from Japanese quail (Extended MhcCoja region).
2. The making of the polymorphism catalogue (1) The design of the high-density DNA polymorphism marker: We built the following thirteen markers, four markers in TRIM subregion, three markers in MHC class IIB subregion, four markers in MHC class I subregion, and two markers in CD1 subregion. (2) Haplotype analysis: The genes in each subregion have linkage each other, but there was recombination region between each subregion. (3) The gene structure of each haplotype: We suggested the differences among haplotypes of the number of functional MHC class IIB loci.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (10 results)

All 2015 2014 2013 2012 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (7 results)

  • [Journal Article] ニホンウズラ主要組織適合性複合体(Mhc Coja)領域のハプロタイプ解析による組換え部位の推定2015

    • Author(s)
      朝治桜子・鈴木進悟・細道一善・原ひろみ・平野貴・椎名隆・半澤惠
    • Journal Title

      DNA多型

      Volume: 22

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Primary analysis of DNA polymorphisms in the TRIM region (MHC subregion) of the Japanese quail, Coturnix japonica2013

    • Author(s)
      鈴木進悟・細道一善・横山佳菜・津田薫・原ひろみ・吉田豊・藤原哲・水谷誠・椎名隆・河野友宏・半澤惠
    • Journal Title

      Animal Science Journal

      Volume: 84巻 Issue: 1 Pages: 90-96

    • DOI

      10.1111/j.1740-0929.2012.01062.x

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] ニホンウズラCD1遺伝子領域の多様性解析2012

    • Author(s)
      横山佳菜・朝治桜子・鈴木進悟・細道一善・原ひろみ・吉田豊・水谷豊・藤原哲・椎名隆・半澤惠
    • Journal Title

      DNA多型

      Volume: 20巻 Pages: 30-35

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] ハプロタイプ解析によるウズラ主要組織適合性複合体の組換え領域の推定2015

    • Author(s)
      朝治桜子・石毛太一郎・鈴木進悟・細道一善・平野貴・原ひろみ・椎名隆・半澤惠
    • Organizer
      日本畜産学会第119回大会
    • Place of Presentation
      宇都宮大学
    • Year and Date
      2015-03-29
    • Related Report
      2014 Annual Research Report
  • [Presentation] ニホンウズラ主要組織適合性複合体Mhc CojaクラスIIB領域のハプロタイプ解析2014

    • Author(s)
      朝治桜子・石毛太一・鈴木進悟・細道一善・平野貴・原ひろみ・椎名隆・半澤惠
    • Organizer
      日本分子生物学会第37回大会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2014-11-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] ニホンウズラCjDMB1およびCjDMB2の遺伝子構造と発現の基礎的比較解析2014

    • Author(s)
      杉山由香里,鈴木進悟,細道一善,椎名隆,平野貴,原ひろみ,半澤惠
    • Organizer
      公益社団法人日本畜産学会第118回大会
    • Place of Presentation
      つくば国際会議場「エポカルつくば」
    • Related Report
      2013 Research-status Report
  • [Presentation] ニホンウズラTRIM亜領域のDNA多型解析2014

    • Author(s)
      菅原拓海,平野貴,原ひろみ,半澤惠
    • Organizer
      日本家禽学会2014年度春季大会
    • Place of Presentation
      筑波大学中地区第3エリア 3B棟
    • Related Report
      2013 Research-status Report
  • [Presentation] ニホンウズラCjDMB1における多型マーカーの確立2013

    • Author(s)
      杉山由香里,鈴木進悟,細道一善,椎名隆,平野貴,原ひろみ,半澤惠
    • Organizer
      公益社団法人日本畜産学会第117回大会
    • Place of Presentation
      新潟差異学五十嵐キャンパス
    • Related Report
      2013 Research-status Report
  • [Presentation] ニホンウズラDMB2遺伝子の多型解析

    • Author(s)
      杉山由香里・原ひろみ・平野貴・半澤惠
    • Organizer
      日本畜産学会第116回大会
    • Place of Presentation
      安田女子大学
    • Related Report
      2012 Research-status Report
  • [Presentation] ニホンウズラCD1遺伝子の基礎的解析

    • Author(s)
      横山佳菜・朝治桜子・鈴木進悟・細道一善・原ひろみ・吉田豊・水谷豊・藤原哲・椎名隆・半澤惠
    • Organizer
      日本組織適合性学会第21回大会
    • Place of Presentation
      明治大学駿河台キャンパス
    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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