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The analysis of genetic features of rare obstetric diseases using whole-exome sequencing and genome-wide association study

Research Project

Project/Area Number 24592494
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Obstetrics and gynecology
Research InstitutionKio University (2015)
National Research Institute for Child Health and Development (2012-2014)

Principal Investigator

Maehara Kayoko  畿央大学, 健康科学部, 教授 (80421311)

Research Collaborator KAMURA Hiromi  国立成育医療研究センター, 研究員
Project Period (FY) 2012-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥5,330,000 (Direct Cost: ¥4,100,000、Indirect Cost: ¥1,230,000)
Fiscal Year 2014: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2013: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2012: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords周産期疾患 / 一塩基多型 / ゲノム
Outline of Final Research Achievements

This study aimed to clarify the genetic and epigenetic features of rare obstetric diseases in Japanese using whole-exome sequencing and arrays. A novel homozygous nonsense mutation in NLRP7 (c.584G>A; p.W195X) was identified in recurrent hydatidiform mole of a Japanese patient using whole-exome sequencing. DNA methylation assay demonstrated that some maternally methylated regions in villi obtained from the case failed to methylate completely. The results reveal that the mutation of NLRP7 gene and the loss of DNA methylation in maternally methylated regions contribute to establish the disease. In addition, using a high resolution genotyping array and samples from 411 Japanese women with normal parity without significant complications, we have compiled 1043 copy number variable regions. This resource is useful for reducing the candidate pathogenetic variants of rare obstetric diseases in Japanese.

Report

(5 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (27 results)

All 2015 2014 2013 2012 Other

All Journal Article (3 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 3 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (15 results) (of which Invited: 1 results) Book (1 results) Remarks (8 results)

  • [Journal Article] Novel Nonsense Mutation in the NLRP7 Gene Associated with Recurrent Hydatidiform Mole.2015

    • Author(s)
      Ito Y, Maehara K, Kaneki E, Matsuoka K, Sugahara N, Miyata T, Kamura H, Yamaguchi Y, Kono A, Nakabayashi K, Migita O, Higashimoto K, Soejima H, Okamoto A, Nakamura H, Kimura T, Wake N, Taniguchi T, Hata K.
    • Journal Title

      Gynecol Obstet Invest

      Volume: Epub ahead of print Issue: 4 Pages: 1-6

    • DOI

      10.1159/000441780

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Genomic, epigenomic, and transcriptomic profiling towards identifying omics -features and specific biomarkers that distinguish uterine leiomyosarcoma and leiomyoma at molecular levels.2015

    • Author(s)
      Miyata T, Sonoda K, Tomikawa J, Tayama C, Maehara K, Kobayashi H, Wake N, Kato K, Hata K, Nakabayashi K
    • Journal Title

      Sarcoma

      Volume: 2015 Pages: 412068-412068

    • DOI

      10.1155/2015/412068

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Compilation of copy number variants identified in phenotypically normal and parous Japanese women2014

    • Author(s)
      Migita O, Maehara K, Kamura H, Miyakoshi K, Tanaka M, Morokuma S, Fukushima K, Shimamoto T, Saito S, Sago H, Nishihama K, Abe K, Nakabayashi K, Umezawa A, Okamura K, Hata K
    • Journal Title

      J. Hum. Genet.

      Volume: 59 Issue: 6 Pages: 326-331

    • DOI

      10.1038/jhg.2014.27

    • Related Report
      2014 Research-status Report 2013 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] 日本人妊娠糖尿病の分子遺伝学的病態解析2015

    • Author(s)
      春日義史、秦健一郎、宮越敬、福武麻里絵、正木繭、池ノ上学、落合大吾、松本直、峰岸一宏、前原佳代子、田中守、青木大輔
    • Organizer
      第67回日本産科婦人科学会学術講演会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2015-04-11
    • Related Report
      2015 Annual Research Report
  • [Presentation] 日本人妊娠糖尿病の分子遺伝学的病態解析2015

    • Author(s)
      春日義史、秦健一郎、宮越敬、福武麻里絵、正木繭、池ノ上学、落合大吾、松本直、峰岸一宏、前原佳代子、田中守、青木大輔
    • Organizer
      第67回日本産科婦人科学会学術講演会
    • Place of Presentation
      横浜
    • Year and Date
      2015-04-10 – 2015-04-12
    • Related Report
      2014 Research-status Report
  • [Presentation] ヒト老化細胞を利用したエピゲノム解析2014

    • Author(s)
      榊みずほ、海老原侑子、岡村浩司、中林一彦、秦健一郎、小林芳郎、前原佳代子
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Research-status Report
  • [Presentation] Copy number variants identified in Japanese women.2014

    • Author(s)
      Migita O., Maehara K., Nakabayashi K., Okamura K., and Hata K.
    • Organizer
      The American Society of Human Genetics 2014 Annual Meeting
    • Place of Presentation
      U.S.A.
    • Year and Date
      2014-10-18 – 2014-10-22
    • Related Report
      2014 Research-status Report
  • [Presentation] 日本人正常分娩妊婦集団の遺伝的特徴~標準データとしての有用性と注意点~2014

    • Author(s)
      右田王介、前原佳代子、嶋本富博、諸隈誠一、福嶋恒太郎、和氣徳夫、宮越敬、田中守、齋藤滋、左合治彦、秦健一郎
    • Organizer
      第66回日本産科婦人科学会学術講演会
    • Place of Presentation
      東京
    • Year and Date
      2014-04-18 – 2014-04-20
    • Related Report
      2014 Research-status Report
  • [Presentation] 正常二倍体だが反復する胞状奇胎に観察される母由来アレルのDNAメチル化異常とNLRP7遺伝子変異2014

    • Author(s)
      伊藤由紀、前原佳代子、兼城英輔、宮田知子、増田彩子、右田王介、岡村愛光、中村仁美、木村正、和氣徳夫、谷口武、秦健一郎
    • Organizer
      第66回日本産科婦人科学会学術講演会
    • Place of Presentation
      東京
    • Year and Date
      2014-04-18 – 2014-04-20
    • Related Report
      2014 Research-status Report
  • [Presentation] SNPアレイ解析による雄核発生ヘテロ奇胎発生機序の推定2014

    • Author(s)
      碓井宏和、瞿佳、前原佳代子、塙真輔、山本憲子、錦見恭子、植原貴史、楯真一、三橋暁、秦健一郎、生水真紀夫
    • Organizer
      第66回日本産科婦人科学会学術講演会
    • Place of Presentation
      東京
    • Year and Date
      2014-04-18 – 2014-04-20
    • Related Report
      2014 Research-status Report
  • [Presentation] 正常分娩妊婦に観察される遺伝的多様性2013

    • Author(s)
      右田王介、前原佳代子、嶋本富博、諸隈誠一、福嶋恒太郎、和氣徳夫、左合治彦、宮越敬、田中守、齋藤滋、秦健一郎
    • Organizer
      日本産科婦人科学会 第65回学術講演会
    • Place of Presentation
      札幌
    • Related Report
      2012 Research-status Report
  • [Presentation] The alteration of centromere in cellular senescence2012

    • Author(s)
      Maehara K
    • Organizer
      2012 Spring Conference of the Korea Society for Gerontology and the 11th Korea-Japan Gerontologist Joint meeting
    • Place of Presentation
      Osong Korea
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] 生殖補助医療技術が出生児のDNAメチル化状態に及ぼす影響の検討2012

    • Author(s)
      久須美真紀、中林一彦、前原佳代子、田嶋敦、秦健一郎
    • Organizer
      第6回日本エピジェネティクス研究会年会
    • Place of Presentation
      東京
    • Related Report
      2012 Research-status Report
  • [Presentation] 日本人集団に共通するコピー数多型2012

    • Author(s)
      右田王介、前原佳代子、岡村浩司、西濱啓一郎、中林一彦、秦健一郎
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Research-status Report
  • [Presentation] 正常分娩妊婦に観察される遺伝的多様性

    • Author(s)
      右田王介, 前原佳代子, 嶋本富博, 諸隈誠一, 福嶋恒太郎, 和氣徳夫, 左合治彦, 宮越敬, 田中守, 齋藤滋, 秦健一郎
    • Organizer
      日本産婦人科学会
    • Place of Presentation
      札幌
    • Related Report
      2013 Research-status Report
  • [Presentation] 日本人正常分娩集団に観察される遺伝的多様性

    • Author(s)
      右田王介,岡村浩司,前原佳代子,嘉村浩美,中林一彦,秦健一郎
    • Organizer
      日本人類遺伝学会第58回大会
    • Place of Presentation
      仙台
    • Related Report
      2013 Research-status Report
  • [Presentation] ヒト新規中心体タンパクMOREの機能解析

    • Author(s)
      伊藤睦美,荻山友貴,榊みずほ,石井浩二郎,齋藤成昭,秦健一郎,高橋考太,前原佳代子
    • Organizer
      第31回染色体ワークショップ・第12回核ダイナミクス研究会
    • Place of Presentation
      足柄下郡
    • Related Report
      2013 Research-status Report
  • [Presentation] ヒト新規中心体タンパクMOREの機能解析

    • Author(s)
      伊藤睦美,荻山友貴,榊みずほ,石井浩二郎,齋藤成昭,秦健一郎,高橋考太,前原佳代子
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Research-status Report
  • [Book] Senescence2012

    • Author(s)
      Maehara K
    • Publisher
      INTECH
    • Related Report
      2012 Research-status Report
  • [Remarks] 畿央大学 教員紹介データベース 前原佳代子

    • URL

      http://webinfo.kio.ac.jp/kio1/view2.asp?msg_no=275

    • Related Report
      2015 Annual Research Report
  • [Remarks] 国立成育医療研究センター 研究所 周産期病態研究部

    • URL

      http://www.ncchd.go.jp/research/nch/ntec/index.html

    • Related Report
      2014 Research-status Report
  • [Remarks] 国立成育医療研究センター 研究所 周産期病態研究部

    • URL

      http://www.ncchd.go.jp/research/nch/ntec/index.html

    • Related Report
      2013 Research-status Report
  • [Remarks] 国立成育医療研究センター 研究所 周産期病態研究部

    • URL

      http://ntec.heteml.jp/nch/

    • Related Report
      2013 Research-status Report
  • [Remarks] 国立成育医療研究センターホームページ

    • URL

      http://www.ncchd.go.jp/

    • Related Report
      2012 Research-status Report
  • [Remarks] 国立成育医療研究センター研究所ホームページ

    • URL

      http://www.ncchd.go.jp/research.php

    • Related Report
      2012 Research-status Report
  • [Remarks] 周産期病態研究部ホームページ

    • URL

      http://www.ncchd.go.jp/research/nch/ntec/index.html

    • Related Report
      2012 Research-status Report
  • [Remarks] 周産期病態研究部ホームページ(オリジナル)

    • URL

      http://ntec.heteml.jp/nch/

    • Related Report
      2012 Research-status Report

URL: 

Published: 2013-05-31   Modified: 2019-07-29  

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