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Creation of biological-artificial hybrid rotary nanomotor

Research Project

Project/Area Number 24651167
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Microdevices/Nanodevices
Research InstitutionThe University of Tokyo

Principal Investigator

IINO Ryota  東京大学, 工学(系)研究科(研究院), 准教授 (70403003)

Co-Investigator(Kenkyū-buntansha) UCHIHASHI Takayuki  金沢大学, 数物科学系, 准教授 (30326300)
Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2013: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2012: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywordsナノマシン / 分子モーター / 1分子計測 / 1分子観察・操作
Research Abstract

DNA-F1, a hybrid motor which has double stranded DNA as a rotor inserted into the stator ring of F1-ATPase was generated. Dependent on the energy of ATP, DNA-F1 showed stepping rotation highly biased to the one direction. Although the efficiency of the unidirectionality and the frequency of finding rotation are still low, we have achieved the first step creating hybrid rotary nanomotor. Furthermore, as a material of hybrid motor, we have constructed the single-molecule rotation assay of V1-ATPase from Enterococcus hirae and basic properties of rotary dynamics have been revealed.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (36 results)

All 2014 2013 2012 Other

All Journal Article (9 results) (of which Peer Reviewed: 9 results) Presentation (22 results) (of which Invited: 18 results) Book (3 results) Remarks (2 results)

  • [Journal Article] Biased Brownian stepping rotation of FoF1-ATP synthase driven by proton motive force2013

    • Author(s)
      Watanabe R, Tabata KV, Iino R, Ueno H, Iwamoto M, Oiki S, Noji H
    • Journal Title

      Nature Communications

      Volume: 4 Issue: 1 Pages: 1-6

    • DOI

      10.1038/ncomms2631

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Basic properties of rotary dynamics of the molecular motor Enterococcus hirae V1-ATPase2013

    • Author(s)
      Yoshihiro Minagawa, Hiroshi Ueno, Mayu Hara, Yoshiko Ishizuka-Katsura, Noboru Ohsawa,Takaho Terada, Mikako Shirouzu, Shigeyuki Yokoyama, Ichiro Yamato, Eiro Muneyuki, Hiroyuki Noji, Takeshi Murata, and Ryota Iino
    • Journal Title

      J.Biol.Chem

      Volume: 288 Issue: 45 Pages: 32700-32707

    • DOI

      10.1074/jbc.m113.506329

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Operation mechanism of F_oF_1-adenosine triphosphate synthase revealed by its structure and dynamics2013

    • Author(s)
      Iino R, Noji H
    • Journal Title

      IUBMB Life

      Volume: 65 Issue: 3 Pages: 238-246

    • DOI

      10.1002/iub.1120

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Intersubunit coordination and cooperativity in ring-shaped NTPases2013

    • Author(s)
      Iino R, Noji H
    • Journal Title

      Current Opinion in Structural Biology

      Volume: 23 Issue: 2 Pages: 229-234

    • DOI

      10.1016/j.sbi.2013.01.004

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] DNAを巻き取る分子リール―F1-ATPaseのおもちゃ―2013

    • Author(s)
      游慧娟,飯野亮太
    • Journal Title

      生物物理

      Volume: 53 Pages: 160-161

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] DNA を巻き取る分子リール―F1-ATPase のおもちゃ―2013

    • Author(s)
      游 慧娟, 飯野亮太
    • Journal Title

      生物物理

      Volume: 53 Pages: 160-161

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular Mechanism of ATP Hydrolysis in F_1-ATPase Revealed by Molecular Simulations and Single-Molecule Observations2012

    • Author(s)
      Shigehiko Hayashi, Hiroshi Ueno, Abdul Rajjak Shaikh, Myco Umemura, Motoshi Kamiya, Yuko Ito, Mitsunori Ikeguchi, Yoshihiro Momoriya, Ryota Iino, Hiroyuki Noji
    • Journal Title

      Journal of American Chemical Society

      Volume: 134 Issue: 20 Pages: 8447-8454

    • DOI

      10.1021/ja211027m

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Principle role of the arginine finger in rotary catalysis of F1-ATPase2012

    • Author(s)
      Komoriya Y, Ariga T, Iino R, Imamura H, Okuno D, Noji H
    • Journal Title

      Journal of Biological Chemistry

      Volume: (First published online) Issue: 18 Pages: 15134-15142

    • DOI

      10.1074/jbc.m111.328153

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Rotary catalysis of the stator ring of F(1)-ATPase2012

    • Author(s)
      Iino R, Noji H
    • Journal Title

      Science

      Volume: (First published online) Issue: 10 Pages: 1732-1739

    • DOI

      10.1016/j.bbabio.2012.03.011

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Presentation] Watching and manipulating biomolecules one at a time2014

    • Author(s)
      Ryota Iino
    • Organizer
      PITTCON 2014
    • Place of Presentation
      Chicago, USA(PAI-NET Session : Ultrasensitive Analytical Technologies for Biology and Chemistry)
    • Year and Date
      2014-03-03
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] 天然ナノモーターと人工ナノローターの1分子ダイナミクス2014

    • Author(s)
      飯野亮太
    • Organizer
      第三回次世代の物質科学・ナノサイエンスを探る
    • Place of Presentation
      札幌
    • Year and Date
      2014-01-10
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Watching and manipulating biomolecules one at a time2014

    • Author(s)
      Ryota Iino
    • Organizer
      PITTCON 2014
    • Place of Presentation
      米国、McCormick Place, Chicago, Illinois
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 天然ナノモーターと人工ナノローターの1分子ダイナミクス2014

    • Author(s)
      飯野亮太
    • Organizer
      第三回 次世代の物質科学・ナノサイエンスを探る
    • Place of Presentation
      北海道、北海道大学百年記念会館
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Molecular mechanism of biological nanomachines probed by single-molecule techniques2013

    • Author(s)
      Ryota Iino
    • Organizer
      12th International Conference on Atomically Controlled Surfaces, Interfaces and Nanostructures (ACSIN-12)
    • Place of Presentation
      Tsukuba, Japan
    • Year and Date
      2013-11-07
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] You can observe a lot just by watching motions of individual molecules2013

    • Author(s)
      Ryota Iino
    • Organizer
      Japanese-German Frontiers of Science Symposium
    • Place of Presentation
      Kyoto, Japan
    • Year and Date
      2013-11-01
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] 型顕微鏡を用いたリアルタイム1分子イメージング : 蛍光法と暗視野法2013

    • Author(s)
      飯野亮太
    • Organizer
      第51回生物物理学会年会オリンパスランチョンセミナー
    • Place of Presentation
      京都
    • Year and Date
      2013-10-28
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] 生体分子モーターの揺らぎと機能2013

    • Author(s)
      飯野亮太
    • Organizer
      高等研究所「分子基盤に基づく生体機能への揺らぎとダイナミックネットワークの解明」第2回研究会
    • Place of Presentation
      京都
    • Year and Date
      2013-08-09
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Operation mechanism of rotary molecular motor F1 probed by single-molecule techniques2013

    • Author(s)
      Ryota Iino
    • Organizer
      American Physical Society March Meeting 2013
    • Place of Presentation
      Baltimore, USA(Session G43: Focus Session : Motor dynamics - from Single Molecules to Cells II)
    • Year and Date
      2013-03-19
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] 金プローブで観た生体分子モーターの動き2013

    • Author(s)
      飯野亮太
    • Organizer
      公益財団法人新世代研究所. 2013年度第1回バイオ単分子研究会
    • Place of Presentation
      岩手
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Basic properties of rotary dynamics of Enterococcus hirae V1-ATPase motor protein2013

    • Author(s)
      Minagawa Y, Ueno H, Hara M, Ishizuka-Katsura Y, Ohsawa N, Terada T, Shirouzu M, Yokoyama S, Noji H, Murata T, Iino R
    • Organizer
      日本生物物理学会第51回年会
    • Place of Presentation
      京都府、国立京都国際会館
    • Related Report
      2013 Annual Research Report
  • [Presentation] Direct observation of the rotation of V1-ATPase from Enterococcus hirae and its torque2013

    • Author(s)
      Ueno H, Minagawa Y, Yamato I, Murata T, Iino R, Muneyuki E
    • Organizer
      日本生物物理学会第51回年会
    • Place of Presentation
      京都府、国立京都国際会館
    • Related Report
      2013 Annual Research Report
  • [Presentation] Creation of a hybrid F1 motor with DNA as the rotor2013

    • Author(s)
      Imwamoto K, Iino R, Yamauchi R, Uchihashi T, Noji H
    • Organizer
      日本生物物理学会第51回年会
    • Place of Presentation
      京都府、国立京都国際会館
    • Related Report
      2013 Annual Research Report
  • [Presentation] Molecular mechanism of biological nanomachines probed by single-molecule techniques2013

    • Author(s)
      Ryota Iino
    • Organizer
      12th International Conference on Atomically Controlled Surfaces, Interfaces and Nanostructures (ACSIN-12)
    • Place of Presentation
      茨城県、Tsukuba International Congress Center, Tsukuba
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] You can observe a lot just by watching motions of individual molecules2013

    • Author(s)
      Ryota Iino
    • Organizer
      Japanese-German Frontiers of Science Symposium
    • Place of Presentation
      京都府、Ktoyo Brighton Hotel
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 金プローブで観た生体分子モーターの動き2013

    • Author(s)
      飯野亮太
    • Organizer
      新世代研究所 2013年度第1回バイオ単分子研究会
    • Place of Presentation
      岩手県、ホテル紫苑
    • Related Report
      2013 Annual Research Report
  • [Presentation] 倒立型顕微鏡を用いたリアルタイム1分子イメージング:蛍光法と暗視野法2013

    • Author(s)
      飯野亮太
    • Organizer
      第51回生物物理学会年会 オリンパスランチョンセミナー
    • Place of Presentation
      京都府、国立京都国際会館
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 生体分子モーターの揺らぎと機能2013

    • Author(s)
      飯野亮太
    • Organizer
      国際高等研究所 「分子基盤に基づく生体機能への揺らぎとダイナミックネットワークの解明」 第2回研究会
    • Place of Presentation
      京都府、国際高等研究所
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Operation mechanism of rotary molecular motor F1 probed by single-molecule techniques2013

    • Author(s)
      Ryota Iino
    • Organizer
      American Physical Society March Meeting 2013
    • Place of Presentation
      Baltimore, USA
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Rotary catalysis of the stator ring of F1-ATPase, a nanomotor made by protein2012

    • Author(s)
      Ryota Iino
    • Organizer
      1st International Conference on Emerging Advanced Nanomaterials (ICEAN)
    • Place of Presentation
      Brisbane, Australia
    • Year and Date
      2012-10-23
    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Invited
  • [Presentation] Rotary catalysis of the stator ring of F_1-ATPase2012

    • Author(s)
      Ryota Iino
    • Organizer
      The 17th European Bioenergetics Conference (EBEC 2012)
    • Place of Presentation
      Freiburg, Germany
    • Year and Date
      2012-09-16
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Rotary catalysis of the stator ring of F1-ATPase2012

    • Author(s)
      Ryota Iino
    • Organizer
      The 17th European Bioenergetics Conference (EBEC 2012)
    • Place of Presentation
      Freiburg, Germany
    • Related Report
      2012 Research-status Report
    • Invited
  • [Book] 「モータータンパク質」DOJIN BIOSCIENCEシリーズ「揺らぎ・ダイナミクスと生体機能-物理化学的視点からみた生体分子-」Part III機能とダイナミクス第15章1節2013

    • Author(s)
      飯野亮太
    • Publisher
      化学同人
    • Related Report
      2013 Final Research Report
  • [Book] DOJIN BIOSCIENCEシリーズ「揺らぎ・ダイナミクスと生体機能-物理化学的視点からみた生体分子-」Part III 機能とダイナミクス 第15章1節 モータータンパク質2013

    • Author(s)
      飯野亮太
    • Total Pages
      10
    • Publisher
      化学同人
    • Related Report
      2013 Annual Research Report
  • [Book] DOJIN BIOSCIENCEシリーズ「生体分子の動きを探る -揺らぎと生体機能-」Part IV 機能とダイナミクス 第15章1節「モータータンパク質」2013

    • Author(s)
      飯野亮太
    • Total Pages
      10
    • Publisher
      化学同人
    • Related Report
      2012 Research-status Report
  • [Remarks] 1.回転分子モーターV1の動きを1分子毎に観察:構造が類似するF1とは異なるユニークな回転特性が明らかに

    • URL

      http://www.u-tokyo.ac.jp/ja/utokyo-research/research-news/rotary-dynamics-of-molecular-motor-v1/

    • Related Report
      2013 Final Research Report
  • [Remarks] 回転分子モーターV1の動きを1分子毎に観察

    • URL

      http://www.u-tokyo.ac.jp/ja/utokyo-research/research-news/rotary-dynamics-of-molecular-motor-v1/

    • Related Report
      2013 Annual Research Report

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Published: 2013-05-31   Modified: 2019-07-29  

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