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Development of visualization technique of cancer cell by click chemistry

Research Project

Project/Area Number 24651264
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Chemical biology
Research InstitutionUniversity of Miyazaki

Principal Investigator

XU YAN  宮崎大学, 医学部, 准教授 (40506763)

Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2013: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Fiscal Year 2012: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords生体分子 / 可視化 / バイオテクノロジー / 核酸 / 糖
Research Abstract

The research project focuses on the development of visualization technique of cancer cell. Utilizing the high resolution of light on spatial and temporal, the fluorescent probe that synthesized on the basis of organic chemistry is used to visualize cancer cells. To light up the cancer cells by small organic probe molecules with specific and efficient click reaction on cancer cells, cancerous tumor can be detected in real time. We synthesized the nucleic acid and sugar derivatives having alkyne as a tracer. We further developed a coumarin molecule having an azide group as a profluorophore. The profluorophore coumarin has no fluorescence, whereas click reaction will result in a strong fluorescence. We then used the profluorophore moiety which serve as a light-up reporter to painting chromosome DNA based on click reaction and visualized the clear chromosomes in multicolor. The method has been successfully applied to detect the signaling molecule derivative 8-azido cAMP in cells.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (22 results)

All 2014 2013 2012 Other

All Journal Article (8 results) (of which Peer Reviewed: 8 results) Presentation (10 results) Book (1 results) Remarks (3 results)

  • [Journal Article] Direct light-up of cAMP derivatives in living cells by click reactions2013

    • Author(s)
      K. Ito, H. Liu, M. Komiyama, T. Hayashi, and Y. Xu
    • Journal Title

      Molecules

      Volume: 18 Issue: 10 Pages: 12909-12915

    • DOI

      10.3390/molecules181012909

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] A Chemistry-Based Method to Detect Individual Telomere Lengths at a Single Chromosome Terminus2013

    • Author(s)
      T. Ishizuka, Y. Xu, and M. Komiyama
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 135 Issue: 1 Pages: 14-17

    • DOI

      10.1021/ja308481c

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Targeting Human Telomeric Higher-Order DNA : Dimeric G-quadruplex Units Serve as Preferred Binding Site2013

    • Author(s)
      C. Zhao, L. Wu, J. Ren, Y. Xu and X. Qu
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 135 Issue: 50 Pages: 18786-18789

    • DOI

      10.1021/ja410723r

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Conjugation of peptide nucleic acid with pyrrole-imidazole polyamide to specifically recognize and cleave DNA2013

    • Author(s)
      W. Kameshima, T. Ishizuka, M. Minoshima, H. Sugiyama, Y. Xu, and M. Komiyama
    • Journal Title

      Angew. Chem. Int. Ed. Engl.

      Volume: 52 Issue: 51 Pages: 13681-13684

    • DOI

      10.1002/anie.201305489

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evidence for G-quadruplex DNA in human cells2013

    • Author(s)
      Y. Xu and M. Komiyama
    • Journal Title

      Chembiochem.

      Volume: 14 Issue: 8 Pages: 927-928

    • DOI

      10.1002/cbic.201300157

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Oligonucleotide Models of Telomeric DNA and RNA Form a Hybrid G-quadruplex Structure as a Potential Component of Telomeres2012

    • Author(s)
      Yan Xu, Takumi Ishizuka, Jie Yang, Kenichiro Ito, Hitoshi Katada, Makoto Komiyama, Tetsuya Hayashi
    • Journal Title

      J. Bio. Chem.

      Volume: Vol. 287 Issue: 50 Pages: 41787-41796

    • DOI

      10.1074/jbc.m112.342030

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] G-rich Sequence-specific Recognition and Scission of Human Genome by PNA/DNA Hybrid G-quadruplex Formation2012

    • Author(s)
      Takumi Ishizuka, Makoto Komiyama, Yan Xu
    • Journal Title

      Angew. Chem., Int. Ed.

      Volume: Vol. 51 Issue: 29 Pages: 7198-7202

    • DOI

      10.1002/anie.201201176

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Structure, function and targeting of human telomere RNA2012

    • Author(s)
      Y. Xu and M. Komiyama
    • Journal Title

      Methods

      Volume: 57 Issue: 1 Pages: 100-105

    • DOI

      10.1016/j.ymeth.2012.02.015

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] To connect cell by DNA forming G-quadruplex2014

    • Author(s)
      Hongshan LIU, Takumi ISHIZUKA, Yan XU
    • Organizer
      日本化学会第94春季年会
    • Place of Presentation
      名古屋大学(名古屋市)
    • Year and Date
      2014-03-27
    • Related Report
      2013 Final Research Report
  • [Presentation] DNA四重鎖構造を解析する機能性プローブの開発2014

    • Author(s)
      石塚匠・徐岩
    • Organizer
      日本化学会第94春季年会
    • Place of Presentation
      名古屋大学東山キャンパス(愛知県名古屋市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 19F-labeled telomere RNA G-quadruplex structure2014

    • Author(s)
      BAO, Hongliang; ISHIZUKA Takumi; XU, Yan
    • Organizer
      日本化学会第94春季年会
    • Place of Presentation
      名古屋大学東山キャンパス(愛知県名古屋市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] To connect cell by DNA forming G-quadruplex2014

    • Author(s)
      LIU, Hongshan; ISHIZUKA Takumi; XU, Yan
    • Organizer
      日本化学会第94春季年会
    • Place of Presentation
      名古屋大学東山キャンパス(愛知県名古屋市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Chromosome painting by using click chemistry : A light-up approach2013

    • Author(s)
      Takumi Ishizuka, Yan Xu
    • Organizer
      第40回国際核酸化学シンポジウム(The 40th International Symposium on Nucleic Acids Chemistry)
    • Place of Presentation
      立命館大学びわこ・くさつキャンパス(滋賀県草津市)
    • Year and Date
      2013-03-23
    • Related Report
      2013 Final Research Report
  • [Presentation] 19Fを含むテロメアRNA四重鎖の構造と安定性2013

    • Author(s)
      鮑宏亮、徐岩
    • Organizer
      日本化学会第93回春季年会
    • Place of Presentation
      立命館大学びわこ・くさつキャンパス(滋賀県草津市)
    • Year and Date
      2013-03-22
    • Related Report
      2013 Final Research Report
  • [Presentation] Chromosome painting by using click chemistry: A light-up approach2013

    • Author(s)
      Takumi Ishizuka, Yan Xu
    • Organizer
      The 40th International Symposium on Nucleic Acids Chemistry(第40回国際核酸化学シンポジウム)
    • Place of Presentation
      神奈川大学(神奈川県横浜市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] クリック化学により染色体DNA のマルチカラーイメージング2013

    • Author(s)
      劉泓汕
    • Organizer
      日本化学会第93回春季年会
    • Place of Presentation
      立命館大学びわこ・くさつキャンパス(滋賀県草津市)
    • Related Report
      2012 Research-status Report
  • [Presentation] Structure and Biological Function of Telomere RNA2012

    • Author(s)
      徐岩
    • Organizer
      第39回国際核酸化学シンポジウム
    • Place of Presentation
      名古屋大学豊田講堂(愛知県)
    • Year and Date
      2012-11-15
    • Related Report
      2013 Final Research Report 2012 Research-status Report
  • [Presentation] ヒトテロメアDNAとRNAによるハイブリッド四重鎖の形成およびその生化学機能2012

    • Author(s)
      徐 岩
    • Organizer
      第6回バイオ関連化学シンポジウム
    • Place of Presentation
      北海道大学高等教育推進機構
    • Related Report
      2012 Research-status Report
  • [Book] DNA Conjugates and Sensors2012

    • Author(s)
      M. Komiyama, Y. Xu and J. Sumaoka
    • Publisher
      Royal Society of Chemistry
    • Related Report
      2013 Final Research Report
  • [Remarks]

    • URL

      http://www.miyazaki-med.ac.jp/MMCCHEM/index.html

    • Related Report
      2013 Final Research Report
  • [Remarks] 宮崎大学医学部機能制御学講座物質科学分野研究室

    • URL

      http://www.miyazaki-med.ac.jp/MMCCHEM/index.html

    • Related Report
      2013 Annual Research Report
  • [Remarks] 宮崎大学医学部機能制御学講座物質科学分野研究室

    • URL

      http://www.miyazaki-med.ac.jp/MMCCHEM/index.html

    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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