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Functional Model of Vitamin B12 and F430-dependent Enzymes

Research Project

Project/Area Number 24655051
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Inorganic chemistry
Research InstitutionOsaka University

Principal Investigator

HAYASHI Takashi  大阪大学, 工学(系)研究科(研究院), 教授 (20222226)

Co-Investigator(Renkei-kenkyūsha) OOHORA Koji  大阪大学, 大学院工学研究科, 助教 (10631202)
Research Collaborator MORITA Yoshitsugu  
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2013: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2012: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywordsメチオニン合成酵素 / ミオグロビン / コバルトコリン / メチル基転移 / 酵素モデル / コバラミン / ビタミンB12 / タンパク質 / コバルトコリノイド錯体 / メチル基転移反応
Outline of Final Research Achievements

Methionine synthase is responsible for the methylation of homocystein to yield methionine. Our group has recently prepared an enzyme model using a unique conjugate between apomyoglobin and a cobalt tetradehydrocorrin complex. The Co(II) tetradehydrocorrin complex as an artificial cofactor is inserted into the heme pocket of apomyoglobin with axial ligation of His93, which is characterized by EPR spectroscopy and X-ray crystal structure analysis. Reduction of the protein upon addition of dithionite is found to provide a Co(I) complex. The crystal structure of the Co(I) complex in the protein clearly reveals the tetra-coordinate species which forms due to the cleavage of the axial ligation. This behavior has been proposed to occur during formation of cob(I)alamin as a reaction intermediate. The addition of methyl iodide to the Co(I) species provides a photoactive species and the ESI-TOF MS spectrum of the species supports the formation of a Co-CH3 bond in the heme pocket.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (23 results)

All 2015 2014 2013 2012 Other

All Journal Article (7 results) (of which Peer Reviewed: 7 results,  Open Access: 1 results,  Acknowledgement Compliant: 2 results) Presentation (13 results) (of which Invited: 13 results) Book (2 results) Remarks (1 results)

  • [Journal Article] Co(II)/Co(I) Reduction-induced Axial Histidine-flipping in Myoglobin Reconstituted with a Cobalt Tetradehydrocorrin as a Methionine Synthase Model2014

    • Author(s)
      Takashi Hayashi, Yoshitsugu Morita, Eiichi Mizohata, Koji Oohora, Jun Ohbayashi, Tsuyoshi Inoue, and Yoshio Hisaeda
    • Journal Title

      Chem. Commun.

      Volume: 50 Issue: 83 Pages: 12560-12563

    • DOI

      10.1039/c4cc05448b

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Hemoprotein-based Supramolecular Assembling Systems2014

    • Author(s)
      Koji Oohora, Takashi Hayashi
    • Journal Title

      Curr. Opin. Chem. Biol.

      Volume: 19 Pages: 154-161

    • DOI

      10.1016/j.cbpa.2014.02.014

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] H_20_2-dependent Substrate Oxidation by an Engineered Diiron Site in a Bacterial Hem erythrin2014

    • Author(s)
      Yasunori Okamoto, Akira Onoda, Himshi Sugimoto, Yu Takano, Shun Hirota, Donald M. Kurtz, Jr., Yoshitsugu Shiro, Takashi Hayashi
    • Journal Title

      Chemical Communications

      Volume: 50 Issue: 26 Pages: 3421-3423

    • DOI

      10.1039/c3cc48108e

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] A Rhodium Complex-linked Hybrid Biocatalyst : Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity2014

    • Author(s)
      Kazuki Fukumoto, Akira Onoda, Eiichi Mizohata, Marco Bocola, Tsuyoshi Inoue, Ulrich Schwaneberg and Takashi Hayashi
    • Journal Title

      ChemCatChem

      Volume: (印刷中) Issue: 5 Pages: 1229-1235

    • DOI

      10.1002/cctc.201301055

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] C(sp3)-H Bond Hydroxylation Catalyzed by Myoglobin Reconstituted with Manganese Porphycene2013

    • Author(s)
      Koji Oohora, Yushi Kihira, Eiichi Mizohata, Tsuyoshi Inoue, Takashi Hayashi
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 135 Issue: 46 Pages: 17282-17285

    • DOI

      10.1021/ja409404k

    • Related Report
      2013 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Crystal Structure, Exogenous Ligand Binding and Redox Properties of an Engineered Diiron Active Site in a Bacterial Hemeythrin2013

    • Author(s)
      Yasunori Okamoto, Akira Onoda, Hiroshi Sugimoto, Yu Takano, Shun Hirota, Donald M. Kurtz, Jr., Yoshitsugu Shiro, Takashi Hayashi
    • Journal Title

      Inorganic Chemistry

      Volume: 52 Issue: 22 Pages: 13014-13020

    • DOI

      10.1021/ic401632x

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] A rhodium complex-linked β-barrel protein as a hybrid biocatalyst for phenylacetylene polymerization2012

    • Author(s)
      小野田晃、福本和貴、Marco Bocola、Marcus Arlt、Ulrich Schwaneberg、林高史
    • Journal Title

      Chemical communication

      Volume: 48 Issue: 78 Pages: 9756-9758

    • DOI

      10.1039/c2cc35165j

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] Myoglobin Reconstituted with Cobalt Tetradehydrocorrin as a Methionine Synthase2015

    • Author(s)
      Takashi Hayashi, Yoshitsugu Morita, Koji Oohora
    • Organizer
      IUPAC-2015
    • Place of Presentation
      Busan, Korea
    • Year and Date
      2015-08-11
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Modification of Hemoprotein with an Artificially Created Cofactor to Generate a New Biocatalyst2015

    • Author(s)
      Takashi Hayashi
    • Organizer
      13th International Symposium on Applied Bioinorganic Chemistry
    • Place of Presentation
      Galway, Ireland
    • Year and Date
      2015-06-12 – 2015-06-15
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] A Structure and Functional Model of Methionine Synthase: Myoglobin with a Tetradehydrocorrin Co Complex2015

    • Author(s)
      Takashi Hayashi, Yoshitsugu Morita, Koji Oohora
    • Organizer
      The 5th Georgian Bay International Conference on Bioinorganic Chemisty
    • Place of Presentation
      Parry Sound, Canada
    • Year and Date
      2015-05-22
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Structural Model of Methionine Synthase by Myoglobin Reconstituted with a Cobalt Corrin Derivative2014

    • Author(s)
      Takashi Hayashi, Yoshitsugu Morita, Koji Oohora
    • Organizer
      7th Asian Biological Inorganic Chemistry Conference
    • Place of Presentation
      Gold Coast, Australia
    • Year and Date
      2014-11-30 – 2014-12-05
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Supramolecular Porphyrin Arrays Mediated by Hemoprotein Matrix2014

    • Author(s)
      Takashi Hayashi, Koji Oohora, Akira Onoda
    • Organizer
      223th Electrochemical Society Meeting
    • Place of Presentation
      Toronto, Canada
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] Alkane Hydroxylation Catalyzed by Myoglobin Reconstituted with Mn-Porphycene2014

    • Author(s)
      Takashi Hayashi
    • Organizer
      4th Georgian Bay International Conference on Bioinorganic Chemistry
    • Place of Presentation
      Parry Sound, Canada
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] Construction of a Methionine Synthase Model by Apomyoglobin–Cobalt Corrin Complex2014

    • Author(s)
      Takashi Hayashi
    • Organizer
      16th International Conference on Biological Inorganic Chemistry
    • Place of Presentation
      Grenoble, France
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] Structure and Function of Hemoproteins with Artificially Created Prosthetic Groups2014

    • Author(s)
      Takashi Hayashi
    • Organizer
      4th Asian Conference on Coordination Chemistry
    • Place of Presentation
      Jeju, Korea
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] Structure and Catalytic Activity of Myoglobin Reconstituted with Mn-Porphycene2014

    • Author(s)
      Takashi Hayashi
    • Organizer
      The 2nd Japan-France Coordination Chemistry Symposium 2013
    • Place of Presentation
      Nara
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] Physicochemical Properties of Hemoproteins Reconstituted with Metalloporphyrins2012

    • Author(s)
      Takashi Hayashi
    • Organizer
      221th Electrochemical Society Meeting
    • Place of Presentation
      Seattle, USA
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Supramolecular Hemoprotein Assembly via Heme–Heme Pocket Interaction2012

    • Author(s)
      Takashi Hayashi
    • Organizer
      7th International Conference on Porphyrins and Phthalocyanines
    • Place of Presentation
      Jeju, Korea
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Heme Pocket Is an Attractive Cavity for Bioorganometallic Reaction Centers2012

    • Author(s)
      Takashi Hayashi
    • Organizer
      12th International Symposium on Bioorganometallic Chemistry
    • Place of Presentation
      Toronto, Canada
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Structure and Function of Hemoproteins with Artificially Created Prosthetic Groups2012

    • Author(s)
      Takashi Hayashi
    • Organizer
      6th Asian Conference on Biological Inorganic Chemistry
    • Place of Presentation
      Hong Kong, China
    • Related Report
      2012 Research-status Report
    • Invited
  • [Book] Bioorganometallic Chemistry (分担)2015

    • Author(s)
      Akira Onoda, Takashi Hayashi, Michele Salmain
    • Total Pages
      28
    • Publisher
      Wiley VCH
    • Related Report
      2014 Annual Research Report
  • [Book] Coordination Chemistry in Protein Cages2013

    • Author(s)
      Takashi Hayashi
    • Total Pages
      22
    • Publisher
      Wiley
    • Related Report
      2013 Research-status Report
  • [Remarks] 研究内容

    • URL

      http://www.applied-bioinorganic.jp/jp/research/

    • Related Report
      2012 Research-status Report

URL: 

Published: 2013-05-31   Modified: 2019-07-29  

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