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Reaction Mechansim of [NiFe]-hydrogenase by Neutron Structural Chmeistry

Research Project

Project/Area Number 24657077
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Structural biochemistry
Research InstitutionUniversity of Hyogo

Principal Investigator

HIGUCHI Yoshiki  兵庫県立大学, 生命理学研究科, 教授 (90183574)

Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2013: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2012: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywordsヒドロゲナーゼ / X線結晶解析 / 反応機構 / Ni酵素 / 燃料電池
Research Abstract

The goal of this study is to elucidate the reaction mechansim of at the active site of [NiFe]-hydrogenase by neutron diffraction study. For this purpose, we have tried to prepare large crystals of hydrogenase in high quality in D2O.
We have improved the crystallization condition by using 2-methyl-2,4-pentanediol(MPD) as a precipitant in D2O. We found that MPD is oxidized to be 4-hydroxy-4-methyl-2-pentanone(HMPO) which causes a serious damage to the quality of the crystals. We have successfully determined the more suitable crystallization condition under anaerobic condition. As a result, we have succeeded in prearation of a crystal with a volume of 11 mm3. In addition, we have found the condition to freeze the large crystals without damage. Unfortunately, the reactor (neutron source) of JAEA in Tokai is still in preparatory period due to a serious disaster in the area of East Japan in 2011, we will try to do neutron diffraction study in the near future.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (88 results)

All 2014 2013 2012 Other

All Journal Article (24 results) (of which Peer Reviewed: 14 results) Presentation (60 results) (of which Invited: 11 results) Book (4 results)

  • [Journal Article] New insights into the catalytic active-site structure of multicopper oxidases.2014

    • Author(s)
      Komori H, Sugiyama R, Kataoka K, Miyazaki K, Higuchi Y, Sakurai T
    • Journal Title

      Acta Crystallogr D Biol Crystallogr

      Volume: 70 Issue: 3 Pages: 772-779

    • DOI

      10.1107/s1399004713033051

    • NAID

      120005451980

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Studies on hydrogenase2013

    • Author(s)
      T. Yagi, Y. Higuchi
    • Journal Title

      Proceedings of the Japan Academy, Series B

      Volume: 89 Issue: 1 Pages: 16-33

    • DOI

      10.2183/pjab.89.16

    • NAID

      130003365103

    • ISSN
      0386-2208, 1349-2896
    • Related Report
      2013 Annual Research Report 2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Structural Aspects of [NiFe]-hydrogenases2013

    • Author(s)
      Y. Shomura and Y. Higuchi
    • Journal Title

      Rev. Inorg. Chem.

      Volume: 33 Issue: 4 Pages: 173-192

    • DOI

      10.1515/revic-2013-0005

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Photosensitivity of the Ni-A State of [NiFe] Hydrogenase from Desulfovibrio vulgaris Miyazaki F with Visible Light2013

    • Author(s)
      H. Osuka, Y. Shomura, H. Komori, N. Shibata, S. Nagao, Y. Higuchi, S. Hirota
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 430 Issue: 1 Pages: 284-288

    • DOI

      10.1016/j.bbrc.2012.10.136

    • NAID

      120005716864

    • Related Report
      2013 Annual Research Report 2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] 膜結合型ヒドロゲナーゼの酸素耐性機構の解明2013

    • Author(s)
      庄村康人,樋口芳樹
    • Journal Title

      生物物理

      Volume: 53-2 Pages: 82-85

    • NAID

      10031151786

    • Related Report
      2013 Annual Research Report 2013 Final Research Report 2012 Research-status Report
  • [Journal Article] Inhibitory activity of Filipendula ulmaria on recombinant histidine decarboxykase.2013

    • Author(s)
      Nitta Yoko
    • Journal Title

      Food Chemistry

      Volume: 138 Issue: 2-3 Pages: 1551-1556

    • DOI

      10.1016/j.foodchem.2012.10.074

    • Related Report
      2013 Annual Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Cyrstal structure of the CueO mutants at Glu506, the key amino acid located in the proton transfer pathway for dioxygen reduction2013

    • Author(s)
      H. Komori, T. Kajikawa, K. Kataoka, Y. Higuchi & T. Sakurai
    • Journal Title

      Biochem. Biophys. Res. Commun.

      Volume: 438 Issue: 4 Pages: 686-690

    • DOI

      10.1016/j.bbrc.2013.07.121

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystallization and X-ray diffraction analysis of nylon hydrolase (NylC) from Arthrobacter sp2013

    • Author(s)
      Nagai, K., Yasuhira, K., Tanaka, Y., Kato, D., Takeo, M., Higuchi, Y., Negoro, S., & Shibata N.
    • Journal Title

      KI72 Acta Cryst.

      Volume: F69 Issue: 10 Pages: 1151-1154

    • DOI

      10.1107/s1744309113024263

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Formation of Oligomeric Cytochrome c during Folding by lntermolecular Hydrophobic Interaction between N-and C-Terminal α-Helices2013

    • Author(s)
      Partha Pratim Parui, Megha Subhash Deshpande, Satoshi Nagao, Hironari Kamikubo. Hirofumi Komori. Yoshiki Higuchi, Miklo Kataoka . Shun Hirota
    • Journal Title

      Biochemistry

      Volume: 52巻 Issue: 48 Pages: 8732-8744

    • DOI

      10.1021/bi400986g

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 立体構造を基盤としたナイロン加水分解酵素の開発と耐熱化機構2013

    • Author(s)
      根来誠司,永井圭介,大島祥平,飯田一希,加藤太一郎,武尾正弘,持地広造,柴田直樹,樋口芳樹
    • Journal Title

      酵素工学ニュース

      Volume: 69 Pages: 12-18

    • Related Report
      2013 Annual Research Report
  • [Journal Article] Purification, Structural Basis for the Reaction Mechanism of S-carbamoylation of HypE by HypF in the Maturation of [NiFe]-hydrogenases2012

    • Author(s)
      Y. Shomura, Y. Higuchi
    • Journal Title

      J. Biol. Chem

      Volume: 287 Issue: 34 Pages: 28409-18419

    • DOI

      10.1074/jbc.m112.387134

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Crystal Structure Analysis of the Translation Factor RF3 (release factor 3)2012

    • Author(s)
      K. Kihira, Y. Shimizu, Y. Shomura, N. Shibata, M. Kitamura, A. Nakagawa, T. Ueda, K. Ochi, Y.Higuchi
    • Journal Title

      FEBS Letters

      Volume: 586 Issue: 20 Pages: 3705-3709

    • DOI

      10.1016/j.febslet.2012.08.029

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Crystal structure of O_2-tolerant [NiFe] hydrogenase reveals the mechanism of O_2-tolerance attributable to a redox-dependent conformational change of [4Fe-3S] cluster2012

    • Author(s)
      Y. Shomura and Y. Higuchi
    • Journal Title

      SPring-8 Research Frontier

      Volume: 2011 Pages: 5-6

    • URL

      http://www.spring8.or.jp/ja/news_publications/publications/research_frontiers/html/rf11

    • Related Report
      2013 Final Research Report
  • [Journal Article] [4Fe-3S]クラスターによる[NiFe]ヒドロゲナーゼの酸素耐性機構の構造基盤2012

    • Author(s)
      樋口芳樹,庄村康人
    • Journal Title

      SPring-8利用者情報誌

      Volume: Vol.17 No.2 Pages: 105-110

    • URL

      http://user.spring8.or.jp/sp8info/

    • Related Report
      2013 Final Research Report
  • [Journal Article] 酸素耐性ヒドロゲナーゼの構造化学的研究-酵素分子に見出された活性保護機構-2012

    • Author(s)
      庄村康人,樋口芳樹
    • Journal Title

      燃料電池

      Volume: VOL.11 No.4 Pages: 67-72

    • NAID

      40019321797

    • Related Report
      2013 Final Research Report
  • [Journal Article] ヒドロゲナーゼの新規酸素耐性機構-膜結合型[NiFe]ヒドロゲナーゼ2012

    • Author(s)
      庄村康人,樋口芳樹
    • Journal Title

      化学

      Volume: Vol. 67 Pages: 70-71

    • Related Report
      2013 Final Research Report
  • [Journal Article] Purification, crystallization, and preliminary X-ray analysis of human histidine decarboxylase2012

    • Author(s)
      Komori Hirofumi
    • Journal Title

      Acta Crystallogr Sect F Struct Biol Cryst Commun

      Volume: 68 Issue: 6 Pages: 675-677

    • DOI

      10.1107/s1744309112015692

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Structural and Oxygen Binding Properties of Dimeric Horse Myoglobin2012

    • Author(s)
      S. Nagao, H. Osuka, T. Yamada, T. Uni, Y. Shomura, K. Imai, Y. Higuchi, S. Hirota
    • Journal Title

      Dalton Transactions

      Volume: 41 Issue: 37 Pages: 11378-11385

    • DOI

      10.1039/c2dt30893b

    • NAID

      120005716865

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Structural study reveals Ser354 determines substrate specificity on human histidine decarboxylase2012

    • Author(s)
      Komori Hirofumi
    • Journal Title

      J. Biol. Chem.

      Volume: 287 Issue: 34 Pages: 29175-29183

    • DOI

      10.1074/jbc.m112.381897

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Domain Swapping of the Heme and N-Terminal α-Helix in Hydrogenobacter thermophilus Cytochrome c552 Dimer2012

    • Author(s)
      Y. Hayashi, S. Nagao, H. Osuka, H. Komori, Y. Higuchi, S. Hirota
    • Journal Title

      Biochemistry

      Volume: 51 Issue: 43 Pages: 8608-8616

    • DOI

      10.1021/bi3011303

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] 酸素耐性ヒドロゲナーゼの構造化学的研究-酵素分子に見出された活性保護機構-2012

    • Author(s)
      庄村康人,樋口芳樹
    • Journal Title

      酸素耐性ヒドロゲナーゼの構造化学的研究-酵素分子に見出された活性保護機構-

      Volume: 11 Pages: 67-72

    • NAID

      40019321797

    • Related Report
      2012 Research-status Report
  • [Journal Article] [4Fe-3S]クラスターによる[NiFe]ヒドロゲナーゼの酸素耐性機構の構造基盤2012

    • Author(s)
      庄村康人,樋口芳樹
    • Journal Title

      SPring-8利用者情報誌

      Volume: 17 Pages: 105-110

    • Related Report
      2012 Research-status Report
  • [Journal Article] Crystal structure of O2-tolerant [NiFe] hydrogenase reveals the mechanism of O2-tolerance attributable to a redox-dependent conformational change of [4Fe-3S] cluster2012

    • Author(s)
      Y. Shomura and Y. Higuchi
    • Journal Title

      SPring-8 Research Frontier 2011

      Volume: 2011 Pages: 5-6

    • Related Report
      2012 Research-status Report
  • [Journal Article] シトクロムc ポリマー:水溶性球状タンパク質に見出された多量化機構2012

    • Author(s)
      廣田俊,樋口芳樹
    • Journal Title

      日本結晶学会誌

      Volume: 54 Pages: 270-275

    • NAID

      10031129961

    • Related Report
      2012 Research-status Report
  • [Presentation] Purification and Crystallization of NAD+-reducing [NiFe]-hydrogenase2014

    • Author(s)
      H. Nakagawa, M. Taketa, M. Habukawa, K. Kihira, N. Shibata, H. Nishihara, K.-S. Yoon, S. Ogo, Ma. Ishii, Y. Igarashi, Y. Shomura and Y. Higuchi
    • Organizer
      第1回ピコバイロジー研究所国際シンポジウム
    • Place of Presentation
      兵庫
    • Related Report
      2013 Final Research Report
  • [Presentation] Crystallization of [NiFe]-hydrogenase maturation protein complex HypA-HypB2014

    • Author(s)
      Y. Okawa, Y. Higuchi, and Y. Shomura
    • Organizer
      第1回ピコバイロジー研究所国際シンポジウム
    • Place of Presentation
      兵庫
    • Related Report
      2013 Final Research Report
  • [Presentation] Crystallization of single crystals of Multi-Copper Oxidases for neutron diffraction experiment2014

    • Author(s)
      M. Akter, H. Komori, N. Shibata, T. Sakurai, K. Kataoka, Y. Higuchi
    • Organizer
      第1回ピコバイロジー研究所国際シンポジウム
    • Place of Presentation
      理研XFEL大会議室(兵庫)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Crystallization of [NiFe]-hydrogenase maturation protein complex HypA-HypB2014

    • Author(s)
      Y. Okawa, Y. Higuchi, and Y. Shomura
    • Organizer
      第1回ピコバイロジー研究所国際シンポジウム
    • Place of Presentation
      理研XFEL大会議室(兵庫)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Purification and Crystallization of NAD+-reducing [NiFe]-hydrogenase2014

    • Author(s)
      H. Nakagawa, M. Taketa, M. Habukawa, K. Kihira, N. Shibata, H. Nishihara, K.-S. Yoon, S. Ogo, Ma. Ishii, Y. Igarashi, Y. Shomura and Y. Higuchi
    • Organizer
      第1回ピコバイロジー研究所国際シンポジウム
    • Place of Presentation
      理研XFEL大会議室(兵庫)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Crystallization of extracellular domains of protocadherin, a neural cell adhesion protein2014

    • Author(s)
      S. Yoshida, T. Hirabayashi, T. Yagi, Y. Shomura and Y. Higuchi
    • Organizer
      第1回ピコバイロジー研究所国際シンポジウム
    • Place of Presentation
      理研XFEL大会議室(兵庫)
    • Related Report
      2013 Annual Research Report
  • [Presentation] [NiFe]ヒドロゲナーゼのX線結晶構造解析2014

    • Author(s)
      庄村康人
    • Organizer
      第27回日本放射光学会年会放射光科学合同シンポジウム
    • Place of Presentation
      広島国際会議場(広島)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 結晶構造解析による水素分解酵素の反応機構解明に向けた試み2014

    • Author(s)
      庄村康人,西川幸志, 井上誠也,玉田太郎,樋口 芳樹
    • Organizer
      蛋白質研究所セミナー
    • Place of Presentation
      大阪大学蛋白質研究所(大阪)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] X-ray Structural Study of O_2-tolerant [NiFe] hydrogenase2013

    • Author(s)
      Y. Higuchi, K.-S. Yoon, H. Nishihara and Y. Shomura
    • Organizer
      International Conference on Bio/Mimetic Solar Energy Conversion (iSEC) 2013
    • Place of Presentation
      大阪
    • Year and Date
      2013-11-23
    • Related Report
      2013 Final Research Report
  • [Presentation] 水素分解酵素の成熟化機構の解明2013

    • Author(s)
      大川雄嗣,樋口芳樹,庄村康人
    • Organizer
      兵庫県立大学シンポジウム
    • Year and Date
      2013-09-24
    • Related Report
      2013 Final Research Report
  • [Presentation] 水素-化学エネルギー変換・ヒドロゲナーゼの構造化学2013

    • Author(s)
      神戸中川英恵,竹田翠,庄村康人,樋口芳樹
    • Organizer
      兵庫県立大学シンポジウム
    • Place of Presentation
      神戸
    • Year and Date
      2013-09-24
    • Related Report
      2013 Final Research Report
  • [Presentation] Reaction Mechanism of S-Carbamoylation of HypE by HypF in the Maturation of [NiFe]-hydrogenase2013

    • Author(s)
      Y. Higuchi and Y. Shomura
    • Organizer
      10th International Hydrogenase Conference・Szeged
    • Place of Presentation
      ハンガリー
    • Year and Date
      2013-07-09
    • Related Report
      2013 Final Research Report
  • [Presentation] H. thermoluteolus TH-1由来NAD^+還元ヒドロゲナーゼの分光学研究2013

    • Author(s)
      太虎林,竹田翠,庄村康人,西川幸志,鈴木雅之,樋口芳樹,廣田俊
    • Organizer
      日本化学会第94春季年会
    • Place of Presentation
      名古屋
    • Year and Date
      2013-03-29
    • Related Report
      2013 Final Research Report
  • [Presentation] NAD^+還元型ヒドロゲナーゼの結晶学的研究2013

    • Author(s)
      中川英恵,竹田翠,土生川真央,木平清人,柴田直樹,樋口芳樹
    • Organizer
      平成25年度日本結晶学会年会
    • Place of Presentation
      熊本
    • Related Report
      2013 Final Research Report
  • [Presentation] [NiFe]-ヒドロゲナーゼ成熟化タンパク質HypAの結晶化2013

    • Author(s)
      大川雄嗣,樋口芳樹,庄村康人
    • Organizer
      平成25年度日本結晶学会
    • Place of Presentation
      熊本
    • Related Report
      2013 Final Research Report
  • [Presentation] Domain Swapping of the Heme and N-Terminal α-Helix in Hydrogenobacter thermophilus Cytochrome-c552 Dimer2013

    • Author(s)
      Y. Hayashi, S. Nagao, H. Osuka, H. Komori, Y. Higuchi, and S. Hirota
    • Organizer
      The 27th Annual Symposium of The Protein Society
    • Place of Presentation
      Boston (USA)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Structure of the native Axin-DIX domain crystallized without mercury compound.2013

    • Author(s)
      N. Shibata, T. Katsutani, S. Terawaki, H. Yamamoto, A. Kikuchi and Y.Higuchi
    • Organizer
      7th International Conference on Structural Genomics 2013
    • Place of Presentation
      京王プラザホテル札幌(北海道)
    • Related Report
      2013 Annual Research Report
  • [Presentation] シトクロムc3ネットワークの電気特性2013

    • Author(s)
      山口晴正,角田早,蔡徳七,平野義明,鈴木雅之,樋口芳樹,松本卓也
    • Organizer
      第7回分子科学討論会
    • Place of Presentation
      京都テルサ(京都)
    • Related Report
      2013 Annual Research Report
  • [Presentation] AFMによるシトクロムc3分子の電気伝導測定2013

    • Author(s)
      角田早,山口晴正,蔡徳七,平野義明,鈴木雅之,樋口芳樹,松本卓也
    • Organizer
      第7回分子科学討論会
    • Place of Presentation
      京都テルサ(京都)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 糖質加水分解酵素ファミリー45に属する担子菌由来エンドグルカナーゼの構造・機 能解析2013

    • Author(s)
      中村彰彦,石田卓也,伊中浩治,樋口芳樹,伏信進矢,五十嵐圭日子,鮫島正浩
    • Organizer
      日本応用糖質科学会平成25年度大会(第62回)
    • Place of Presentation
      鹿児島大学(鹿児島)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Preparation of single crystals of multi-copper oxidases suitable for neutron diffraction2013

    • Author(s)
      M. Akter,小森博文,柴田直樹,庄村康人,櫻井 武,片岡邦重,樋口芳樹
    • Organizer
      平成25年度日本結晶学会年会
    • Place of Presentation
      熊本大学(熊本)
    • Related Report
      2013 Annual Research Report
  • [Presentation] [NiFe]-ヒドロゲナーゼ成熟化タンパク質HypAの結晶化2013

    • Author(s)
      大川雄嗣,樋口芳樹,庄村康人
    • Organizer
      平成25年度日本結晶学会年会
    • Place of Presentation
      熊本大学(熊本)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 細胞接着分子プロトカドヘリン細胞外領域の結晶化2013

    • Author(s)
      吉田早希,平林敬浩,八木健,庄村康人,樋口芳樹
    • Organizer
      平成25年度日本結晶学会年会
    • Place of Presentation
      熊本大学(熊本)
    • Related Report
      2013 Annual Research Report
  • [Presentation] NAD+還元型ヒドロゲナーゼの結晶学的研究2013

    • Author(s)
      中川英恵,竹田翠,土生川真央,木平清人,柴田直樹
    • Organizer
      平成25年度日本結晶学会年会
    • Place of Presentation
      熊本大学(熊本)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 水銀化合物非存在下での野生型 Axin DIX-ドメイン2013

    • Author(s)
      勝谷拓也,柴田直樹,寺脇慎一,山本英樹,菊池章,樋口芳樹
    • Organizer
      平成25年度日本結晶学会
    • Place of Presentation
      熊本大学(熊本)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Catalytic cycle of cytochrome-c3 hydrogenase, a [NiFe]-hydrogenase2012

    • Author(s)
      八木達彦,樋口芳樹
    • Organizer
      第85回日本生化学会大会
    • Place of Presentation
      福岡
    • Year and Date
      2012-12-14
    • Related Report
      2013 Final Research Report
  • [Presentation] Structural Study of O_2-Tolerant [NiFe] Hydrogenase2012

    • Author(s)
      Y. Higuchi
    • Organizer
      The 2nd International Conference on MEXT Project of Integrated Research on Chemical Synthesis
    • Place of Presentation
      愛知
    • Year and Date
      2012-12-11
    • Related Report
      2013 Final Research Report
  • [Presentation] [NiFe]ヒドロゲナーゼの酸素耐性機構の解明-放射光X線利用による精密構造化学-2012

    • Author(s)
      樋口芳樹
    • Organizer
      日本農芸化学会関西支部第477回講演会
    • Place of Presentation
      兵庫
    • Year and Date
      2012-12-01
    • Related Report
      2013 Final Research Report
  • [Presentation] [NiFe]ヒドロゲナーゼ成熟化因子HypE,HypFのX線結晶構造解析2012

    • Author(s)
      庄村康人,尹基石,西原宏史,樋口芳樹
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      愛知
    • Year and Date
      2012-09-24
    • Related Report
      2013 Final Research Report
  • [Presentation] 酸素耐性[NiFe]ヒドロゲナーゼの結晶構造解析2012

    • Author(s)
      庄村康人,尹基石,西原宏史,樋口芳樹
    • Organizer
      酸素耐性[NiFe]ヒドロゲナーゼの結晶構造解析
    • Place of Presentation
      愛知
    • Year and Date
      2012-06-22
    • Related Report
      2013 Final Research Report
  • [Presentation] Computer-simulations Based Design of Nylonoligomer Hydrolase2012

    • Author(s)
      Y.Shigeta, K. Kamiya, T. Baba, T. Matsui, M. Boero , N. Shibata,Y. Higuchi and S. Negoro
    • Organizer
      3rd Symposium on Enzymes & Biocatalysis
    • Place of Presentation
      Xian (China)
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Polymerization and Peroxidase Activity Enhancement of Cytochrome c by Successive Domain Swapping at the C-Terminal Helix2012

    • Author(s)
      S. Hirota, Y. Hattori, Z. Wang, S. Nagao, M. Taketa, H. Komori, H. Kamikubo, T. Matsuo, I. Takahashi, S. Negi, Y. Sugiura, M. Kataoka, Y. Higuchi
    • Organizer
      IEEE International Conference on Computational Photography
    • Place of Presentation
      Seattle (USA)
    • Related Report
      2012 Research-status Report
  • [Presentation] 好熱菌由来シトクロムc-552 2量体の構造と熱安定性2012

    • Author(s)
      林有吾,長尾聡,大須賀久織,小森博文,樋口芳樹,廣田俊
    • Organizer
      第39回分子科学討論会
    • Place of Presentation
      東北大学(宮城)
    • Related Report
      2012 Research-status Report
  • [Presentation] ドメインスワッピングによるミオグロビン二量体の形成2012

    • Author(s)
      長尾 聡,宇仁武史,山田卓矢,大須賀久織,庄村康人,今井清博,樋口芳樹,廣田 俊
    • Organizer
      第39回分子科学討論会
    • Place of Presentation
      東北大学(宮城)
    • Related Report
      2012 Research-status Report
  • [Presentation] 微小重力環境下でのナイロン分解酵素の高品質結晶生成の実例と今後の取り組みについて2012

    • Author(s)
      樋口芳樹,柴田直樹,根来誠司
    • Organizer
      第12回日本蛋白質科学会年会
    • Place of Presentation
      名古屋国際会議場(愛知)
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] 酸素耐性[ NiFe]ヒドロゲナーゼの結晶構造解析2012

    • Author(s)
      庄村 康人,尹 基石,西原 宏史,樋口 芳樹
    • Organizer
      第12回日本蛋白質科学会年会
    • Place of Presentation
      名古屋国際会議場(愛知)
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Polymerization and Peroxidase Activity Enhancement of Cytochrome c by Successive Domain Swapping at the C-Terminal Helix2012

    • Author(s)
      S. Hirota, Y. Hattori, Z. Wang, S. Nagao, M. Taketa, H. Komori, H. Kamikubo, T. Matsuo, I. Takahashi, S. Negi, Y. Sugiura, M. Kataoka, Y. Higuchi
    • Organizer
      International Conference on Porphyrins and Phthalocyanins
    • Place of Presentation
      Pusan (Korea)
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] ヒト由来ヒスチジンデカルボキシラーゼの基質特異性と触媒機構の研究2012

    • Author(s)
      新田陽子,小森博文,樋口芳樹,植野洋志
    • Organizer
      日本生物高分子学会2012年度年会
    • Place of Presentation
      カレッジプラザ(秋田)
    • Related Report
      2012 Research-status Report
  • [Presentation] [NiFe]ヒドロゲナーゼ成熟化因子HypE,HypFのX線結晶構造解析2012

    • Author(s)
      庄村 康人,尹 基石,西原 宏史,樋口 芳樹
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      名古屋大学(愛知)
    • Related Report
      2012 Research-status Report
  • [Presentation] An attempt to solve the ultra-high resolution crystal structures of nylon-oligomer hydrol ases using the crystals grown in space2012

    • Author(s)
      Y. Higuchi, N. Shibata, K. Nagai, Y. Kawashima and S. Negoro
    • Organizer
      14th International Conference on the Crystallization of Biological Macromolecules
    • Place of Presentation
      Huntsville (USA)
    • Related Report
      2012 Research-status Report
  • [Presentation] X 線照射によるマルチ銅活性中心の構造変化2012

    • Author(s)
      小森博文,片岡邦重,櫻井武,宮崎健太郎,樋口芳樹
    • Organizer
      平成24年度日本結晶学会年会
    • Place of Presentation
      東北大学(宮城)
    • Related Report
      2012 Research-status Report
  • [Presentation] Wnt シグナル伝達経路で機能するDIX ドメインを介した相互作用の構造生物学2012

    • Author(s)
      勝谷拓也,寺脇慎一,柴田直樹,山本英樹,Marc Fiedler ,Mariann Bienz,菊池 章,樋口芳樹
    • Organizer
      平成24年度日本結晶学会年会
    • Place of Presentation
      東北大学(宮城)
    • Related Report
      2012 Research-status Report
  • [Presentation] [NiFe]ヒドロゲナーゼの酸素耐性機構の解明 -放射光X線利用による精密構造化学-2012

    • Author(s)
      樋口芳樹
    • Organizer
      日本農芸化学会関西支部 第477回講演会
    • Place of Presentation
      神戸大学(兵庫)
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Structural Study of O2-Tolerant [NiFe] Hydrogenase2012

    • Author(s)
      Y. Higuchi
    • Organizer
      The 2nd International Conference on MEXT Project of Integrated Research on Chemical Synthesis
    • Place of Presentation
      名古屋大学(愛知)
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Catalytic cycle of cytochrome-c3 hydrogenase, a [NiFe]-hydrogenase2012

    • Author(s)
      八木達彦,樋口芳樹
    • Organizer
      第85回日本生化学会大会
    • Place of Presentation
      福岡国際会議場(福岡)
    • Related Report
      2012 Research-status Report
  • [Presentation] Reaction Mechanism of S-Carbamoylation of HypE by HypF in the Maturation of [NiFe]-hydrogenas

    • Author(s)
      Y. Higuchi and Y. Shomura
    • Organizer
      10th International Hydrogenase Conference
    • Place of Presentation
      Szeged (Hungry)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] αフルオロメチルヒスチジンによるヒスタミン合成酵素の阻害機構の解明

    • Author(s)
      小森博文,新田陽子,植野洋志,樋口芳樹
    • Organizer
      第86回日本生化学大会
    • Place of Presentation
      パシフィコ横浜(神奈川)
    • Related Report
      2013 Annual Research Report
  • [Presentation] AFM によるシトクロムc3分子の電気伝導測定

    • Author(s)
      角田早,山口晴正,蔡徳七,平野義明,鈴木雅之,樋口芳樹,松本卓也
    • Organizer
      第 74 回応用物理学会
    • Place of Presentation
      同志社大学(京都)
    • Related Report
      2013 Annual Research Report
  • [Presentation] シトクロムc3ネットワークの電気特性

    • Author(s)
      山口晴正,角田早,蔡徳七,平野義明,鈴木雅之,樋口芳樹,松本卓也
    • Organizer
      第 74 回応用物理学会
    • Place of Presentation
      同志社大学(京都)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 水素-化学エネルギー変換・ヒドロゲナーゼの構造化学

    • Author(s)
      中川英恵、竹田翠、庄村康人、樋口芳樹
    • Organizer
      兵庫県立大学シンポジウム
    • Place of Presentation
      神戸市産業振興センター(兵庫)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 水素分解酵素の成熟化機構の解明

    • Author(s)
      大川雄嗣、樋口芳樹、庄村康人
    • Organizer
      兵庫県立大学シンポジウム
    • Place of Presentation
      神戸市産業振興センター(兵庫)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 超好熱菌由来シトクロムcの多量化と二量体構造

    • Author(s)
      山中優,長尾聡,羽田正雄,小森博文,樋口芳樹,廣田俊
    • Organizer
      第7回バイオ関連シンポジウム(日本化学会)
    • Place of Presentation
      名古屋大学豊田講堂(愛知)
    • Related Report
      2013 Annual Research Report
  • [Presentation] ヒスタミン合成酵素の構造解析

    • Author(s)
      小森博文,新田陽子,植野洋志,樋口芳樹
    • Organizer
      平成25年度日本結晶学会
    • Place of Presentation
      熊本大学(熊本)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Formation of Domain-Swapped Oligomeric Cytochrome c from Its Molten Globule State

    • Author(s)
      M. S. Deshpande, P. P. Parui, M. Yamanaka, S. Nagao, H. Kamikubo, M. Kataoka, H. Komori, Y. Higuchi and S. Hirota
    • Organizer
      第51回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館(京都)
    • Related Report
      2013 Annual Research Report
  • [Presentation] X-ray Structural Study of O2-tolerant [NiFe] hydrogenase

    • Author(s)
      Y. Higuchi, K.-S. Yoon, H. Nishihara and Y. Shomura
    • Organizer
      International Conference on Bio/Mimetic Solar Energy Conversion (iSEC)
    • Place of Presentation
      大阪市立大学(大阪)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Polymerization and Oligomerization of Cytochrome c and Myoglobin by Domain Swapping

    • Author(s)
      S. Hirota, S. Nagao, Y. Hayashi, Z. Wang, A. D. Nugraheni and Y. Higuchi
    • Organizer
      12th International Symposium on Applied Bioinorganic Chemistry
    • Place of Presentation
      Guangzhou (China)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 逆行性輸送因子による積荷認識の構造的基盤

    • Author(s)
      寺脇慎一,大塚寛貴,樋口芳樹,若松馨
    • Organizer
      第29回PFシンポジウム
    • Place of Presentation
      つくば国際会議場エポカル(茨城)
    • Related Report
      2013 Annual Research Report
  • [Presentation] H. thermoluteolus TH-1由来NAD+還元ヒドロゲナーゼの分光学研究

    • Author(s)
      太虎林,竹田翠,庄村康人,西川幸志,鈴木雅之,樋口芳樹,廣田俊
    • Organizer
      日本化学会第94春季年会
    • Place of Presentation
      名古屋大学東山キャンパス(愛知)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 超好熱菌由来シトクロムcのドメインスワッピング

    • Author(s)
      山中優,長尾聡,小森博文,樋口芳樹,廣田俊
    • Organizer
      日本化学会第94春季年会
    • Place of Presentation
      名古屋大学東山キャンパス(愛知)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 大腸菌膜との相互作用によるシトクロムcの多量化

    • Author(s)
      林有吾,長尾聡,山中優,小森博文,樋口芳樹,廣田俊
    • Organizer
      日本化学会第94春季年会
    • Place of Presentation
      名古屋大学東山キャンパス(愛知)
    • Related Report
      2013 Annual Research Report
  • [Book] CSJカレントレビュー15,次世代のバイオ水素エネルギー開発2014

    • Author(s)
      庄村康人,樋口芳樹
    • Total Pages
      174
    • Publisher
      化学同人
    • Related Report
      2013 Final Research Report
  • [Book] 光合成のエネルギー利用と環境応用(三宅淳,佐々健監修)2014

    • Author(s)
      樋口芳樹,ヒドロゲナーゼ
    • Publisher
      CMC出版
    • Related Report
      2013 Final Research Report
  • [Book] CSJカレントレビュー15,次世代のバイオ水素エネルギー開発2014

    • Author(s)
      庄村康人,樋口芳樹
    • Total Pages
      174
    • Publisher
      化学同人
    • Related Report
      2013 Annual Research Report
  • [Book] 光合成のエネルギー利用と環境応用2014

    • Author(s)
      樋口芳樹
    • Total Pages
      308
    • Publisher
      CMC出版
    • Related Report
      2013 Annual Research Report

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Published: 2013-05-31   Modified: 2019-07-29  

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