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Time-resolved small-angle X-ray scattering of GUV deformed by F-BAR domain

Research Project

Project/Area Number 24657078
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Structural biochemistry
Research InstitutionHigh Energy Accelerator Research Organization

Principal Investigator

NOBUTAKA Shimizu  大学共同利用機関法人高エネルギー加速器研究機構, 物質構造科学研究所, 准教授 (20450934)

Co-Investigator(Kenkyū-buntansha) KAWASAKI Masato  大学共同利用機関法人高エネルギー加速器研究機構, 物質構造科学研究所, 准教授 (00342600)
IGARASHI Noriyuki  大学共同利用機関法人高エネルギー加速器研究機構, 物質構造科学研究所, 准教授 (80300672)
Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2013: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2012: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywords生体膜変形 / 時分割X線小角散乱 / ストップトフロー / X線溶液散乱 / 時分割測定 / GUV / 脂質膜変形 / X線小角散乱 / 生体膜
Research Abstract

Some proteins transform an intracellular organelle and maintain structure. It is important to study those interactions in order to understand the structure and the function of the organelle. Then, a stopped-flow was installed in the small-angle X-ray scattering beamline at the Japanese synchrotron facility, Photon Factory, and the structural change of Giant unilamellar vesicle (GUV) interacted by the BAR domain protein was measured by time-resolve method. As a result, although it was very preliminary analysis, it was suggested the structure of GUV was changed with BAR domain in the space scale of around 125 angstrom within 210 seconds.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (25 results)

All 2014 2013 2012

All Journal Article (8 results) (of which Peer Reviewed: 8 results) Presentation (17 results)

  • [Journal Article] Structure of liposome encapsulating proteins characterized by X-ray scattering and shell-modeling2013

    • Author(s)
      Hirai, M., Kimura, R., Takeuchi, K., Hagiwara, Y., Kawai-Hirai, R., Ohta, N., Igarashi, N. and Shimizu, N.
    • Journal Title

      J. Synchrotron Rad.

      Volume: 20 Pages: 869-874

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Refurbishing of Small-Angle X-ray Scattering Beamline, BL-6A at the Photon Factory2013

    • Author(s)
      Shimizu, N., Mori, T., Igarashi, N., Ohta, H., Nagatani, Y., Kosuge, T. and Ito, K.
    • Journal Title

      J. Phys. : Conf. Ser.

      Volume: 425 Pages: 202008-202008

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] New high-brilliance beamline BL-15A of the Photon Factory2013

    • Author(s)
      Igarashi, N., Shimizu, N., Koyama, A., Mori, T., Ohta, H., Niwa, Y., Nitani, H., Abe, H., Nomura, M., Shioya, T., Tsuchiya, K. and Ito, K.
    • Journal Title

      J. Phys. : Conf. Ser.

      Volume: 425 Pages: 72016-72016

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Structure of liposome encapsulating proteins characterized by X-ray scattering and shell-modeling2013

    • Author(s)
      Hirai, M., Kimura, R., Takeuchi, K., Hagiwara, Y., Kawai-Hirai, R., Ohta, N., Igarashi, N. and Shimizu, N
    • Journal Title

      Journal of Synchrotron Radiation

      Volume: 20 Issue: 6 Pages: 869-874

    • DOI

      10.1107/s0909049513020827

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Refurbishing of Small-Angle X-ray Scattering Beamline, BL-6A at the Photon Factory2013

    • Author(s)
      N Shimizu, T Mori, N Igarashi, H Ohta, Y Nagatani, T Kosuge and K Ito
    • Journal Title

      Journal of Physics: Conference Series

      Volume: 425 Issue: 20 Pages: 202008-202008

    • DOI

      10.1088/1742-6596/425/20/202008

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] New high-brilliance beamline BL-15A of the Photon Factory2013

    • Author(s)
      N Igarashi, N Shimizu, A Koyama, T Mori, H Ohta, Y Niwa, H Nitani, H Abe, M Nomura, T Shioya, K Tsuchiya and K Ito
    • Journal Title

      Journal of Physics: Conference Series

      Volume: 425 Issue: 7 Pages: 72016-72016

    • DOI

      10.1088/1742-6596/425/7/072016

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] The binding mechanism of eIF2βwith its partner proteins, eIF5 and eIF2βε2012

    • Author(s)
      Gai, Z., Kitagawa, Y., Tanaka, Y., Shimizu, N., Komoda, K., Tanaka, I. and Yao M.
    • Journal Title

      Biochem. Biophys. Res. Commun.

      Volume: 423 Pages: 515-519

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] The binding mechanism of eIF2β with its partner proteins, eIF5 and eIF2Bε2012

    • Author(s)
      Gai, Z., Kitagawa, Y., Tanaka, Y., Shimizu, N., Komoda, K., Tanaka, I. and Yao M.
    • Journal Title

      Biochem. Biophys. Res. Commun.

      Volume: 423 Pages: 515-519

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] PF BL-15A : 高輝度XAFS/XRF/SAXSビームライン2014

    • Author(s)
      五十嵐教之、小山篤、森丈晴、上條亜衣、西條慎也、大田浩正、仁谷浩明、丹羽尉博、阿部仁、清水伸隆
    • Organizer
      第27回日本放射光学会年会・放射光科学合同シンポジウム
    • Place of Presentation
      広島国際会議場(ポスター)
    • Year and Date
      2014-01-11
    • Related Report
      2013 Final Research Report
  • [Presentation] PF BL-15A:高輝度 XAFS/XRF/SAXS ビームライン2014

    • Author(s)
      五十嵐教之、小山篤、森丈晴、上條亜衣、西條慎也、大田浩正、仁谷浩明、丹羽尉博、阿部 仁、清水伸隆
    • Organizer
      第27回日本放射光学会年会・放射光科学合同シンポジウム
    • Place of Presentation
      広島国際会議場
    • Related Report
      2013 Annual Research Report
  • [Presentation] Refurbishment of SAXS beamlines at Photon Factory2013

    • Author(s)
      Nobutaka Shimizu
    • Organizer
      第51回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館(口頭(企画講演))
    • Year and Date
      2013-10-28
    • Related Report
      2013 Final Research Report
  • [Presentation] Improvement and Upgrade Plan of Small-Angle X-ray Scattering Beamlines at Photon Factory2013

    • Author(s)
      Shimizu, N., Mori, T., Ohta, H., Nagatani, Y., Saijyo, S., Kamijyo, A., Kosuge, T. and Igarashi, N.
    • Organizer
      11th International Conference on Biology and Synchrotron Radiation
    • Place of Presentation
      Hamburg、Germany(ポスター)
    • Year and Date
      2013-09-09
    • Related Report
      2013 Final Research Report
  • [Presentation] BL-15A : Semi-microbeam XAFS/XRF and High- brilliance SAXS beamline at Photon Factory2013

    • Author(s)
      Igarashi, N., Koyama, A., Mori, T., Ohta, H., Kamijo, A., Saijyo, S., Niwa, Y., Nitani, H., Abe, H. and Shimizu, N.
    • Organizer
      11th International Conference on Biology and Synchrotron Radiation
    • Place of Presentation
      Hamburg、Germany(ポスター)
    • Year and Date
      2013-09-09
    • Related Report
      2013 Final Research Report
  • [Presentation] Photon Factoryの小角散乱ビームラインの現状2013

    • Author(s)
      清水伸隆、五十嵐教之、森丈晴、大田浩正、永谷康子、小菅隆、伊藤健二
    • Organizer
      第26回日本放射光学会年会・放射光科学合同シンポジウム
    • Place of Presentation
      名古屋大学(口頭)
    • Year and Date
      2013-01-13
    • Related Report
      2013 Final Research Report
  • [Presentation] Improvement and Upgrade Plan of Small-Angle X-ray Scattering Beamlines at Photon Factory2013

    • Author(s)
      Shimizu, N., Mori, T., Ohta, H., Nagatani, Y., Saijyo, S., Kamijyo, A., Kosuge, T. and Igarashi, N.
    • Organizer
      11th International Conference on Biology and Synchrotron Radiation
    • Place of Presentation
      Grand Elysee Hotel Hamburg, Germany
    • Related Report
      2013 Annual Research Report
  • [Presentation] BL-15A: Semi-microbeam XAFS/XRF and High-brilliance SAXS beamline at Photon Factory2013

    • Author(s)
      Igarashi, N., Koyama, A., Mori, T., Ohta, H., Kamijo, A., Saijyo, S., Niwa, Y., Nitani, H., Abe, H. and Shimizu, N.
    • Organizer
      11th International Conference on Biology and Synchrotron Radiation
    • Place of Presentation
      Grand Elysee Hotel Hamburg, Germany
    • Related Report
      2013 Annual Research Report
  • [Presentation] Refurbishment of SAXS beamlines at Photon Factory2013

    • Author(s)
      Nobutaka Shimizu
    • Organizer
      第51回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館
    • Related Report
      2013 Annual Research Report
  • [Presentation] Photon Factoryの小角散乱ビームラインの現状2013

    • Author(s)
      清水伸隆、五十嵐教之、森丈晴、大田浩正、永谷康子、小菅隆、伊藤健二
    • Organizer
      第26回日本放射光学会年会・放射光科学合同シンポジウム
    • Place of Presentation
      名古屋大学(名古屋)
    • Related Report
      2012 Research-status Report
  • [Presentation] Current Status of Small Angle X-ray Scattering Beamlines at Photon Factory2012

    • Author(s)
      Shimizu, N., Mori, T., Igarashi, N., Ohta, H., Nagatani, Y., Kosuge, T. and Ito, K.
    • Organizer
      15th International Small-Angle Scattering conference (SAS2012)
    • Place of Presentation
      Sydney、Australia(ポスター)
    • Year and Date
      2012-11-20
    • Related Report
      2013 Final Research Report
  • [Presentation] Current Status of Small Angle X-ray Scattering Beamlines at Photon Factory2012

    • Author(s)
      Shimizu, N., Mori, T., Igarashi, N., Ohta, H., Nagatani, Y., Kosuge, T. and Ito, K.
    • Organizer
      第50回日本生物物理学会年会
    • Place of Presentation
      名古屋大学(ポスター)
    • Year and Date
      2012-09-24
    • Related Report
      2013 Final Research Report
  • [Presentation] Development of Small-Angle X-ray Scattering Beamline, BL-6A at the Photon Factory2012

    • Author(s)
      Shimizu, N., Mori, T., Igarashi, N., Ohta, H., Nagatani, Y., Kosuge, T. and Ito, K.
    • Organizer
      11th International Conference on Synchrotron Radiation Instrumentation (SRI2012)
    • Place of Presentation
      Lyon, France(ポスター)
    • Year and Date
      2012-07-11
    • Related Report
      2013 Final Research Report
  • [Presentation] Development of Small-Angle X-ray Scattering Beamline, BL-6A at the Photon Factory2012

    • Author(s)
      Shimizu, N., Mori, T., Igarashi, N., Ohta, H., Nagatani, Y., Kosuge, T. and Ito, K.
    • Organizer
      11th International Conference on Synchrotron Radiation Instrumentation (SRI2012)
    • Place of Presentation
      Center of Congress (Lyon, France)
    • Related Report
      2012 Research-status Report
  • [Presentation] Current Status of Small Angle X-ray Scattering Beamlines at Photon Factory2012

    • Author(s)
      Shimizu, N., Mori, T., Igarashi, N., Ohta, H., Nagatani, Y., Kosuge, T. and Ito, K.
    • Organizer
      第50回日本生物物理学会年会
    • Place of Presentation
      名古屋大学(名古屋)
    • Related Report
      2012 Research-status Report
  • [Presentation] Refurbishment and New Construction of Small-Angle X-ray Scattering beamlines at the Photon Factory2012

    • Author(s)
      N. Shimizu, N. Igarashi, T. Mori, H. Ohta, Y. Nagatani, T. Kosuge, and K. Ito
    • Organizer
      2nd International GISAS Meeting (Satellite meeting of SAS2012)
    • Place of Presentation
      京都工芸繊維大学(京都)
    • Related Report
      2012 Research-status Report
  • [Presentation] Current Status of Small Angle X-ray Scattering Beamlines at Photon Factory2012

    • Author(s)
      Shimizu, N., Mori, T., Igarashi, N., Ohta, H., Nagatani, Y., Kosuge, T. and Ito, K.
    • Organizer
      15th International Small-Angle Scattering conference (SAS2012)
    • Place of Presentation
      Sydney Convention & Exhibition Centre (Sydney, Australia)
    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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