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Creaction of artificial endonuclease using DNA-cleavage domain of a novel restriction enzyme

Research Project

Project/Area Number 24658077
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Applied microbiology
Research InstitutionKyoto University

Principal Investigator

KITA Keiko  京都大学, (連合)農学研究科(研究院), 教授 (70234226)

Research Collaborator NAKAMURA Keigo  京都大学, 農学部, 4回生
HIOKI Takahiro  京都大学, 農学部, 4回生
Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2013: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2012: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords制限酵素 / 分子工学 / DNA / ドメイン / リンカー / 分子間相互作用 / 構造機能相関 / 人工酵素 / ヌクレアーゼ
Research Abstract

Restriction enzymes recognize and cleave DNA at specific site, and are both indispensable tools for gene manipulation and for studying sequence-specific interaction with DNA. Co-crystal structure of EcoT38I reveals several unique features for DNA recognition and catalysis. This study demonstrates that site-directed mutagenesis approach yielded a EcoT38I (GPuGCPyC) variant that preferentially cleaves one of the degenerate sequences (GAGCTC).

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (8 results)

All 2014 2013 2012 Other

All Presentation (8 results) (of which Invited: 1 results)

  • [Presentation] DNA認識ドメインへの変異導入による制限酵素EcoT38Iの機能改変2014

    • Author(s)
      日置貴大,中村啓悟,喜多恵子
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      明治大学生田キャンパス
    • Year and Date
      2014-03-30
    • Related Report
      2013 Final Research Report
  • [Presentation] Molecular engineering of a novel restriction endonuclease EcoT38I2013

    • Author(s)
      Keiko KITA
    • Organizer
      Conference on transposition and genome engineering 2013
    • Place of Presentation
      Budapest, Hungary
    • Year and Date
      2013-09-20
    • Related Report
      2013 Final Research Report
  • [Presentation] Molecular engineering of a novel restriction endonuclease for creating new specificity2012

    • Author(s)
      Keiko KITA
    • Organizer
      13^<th> Swiss Japanese conference on Biotechnology and Bioprocess Engineering
    • Place of Presentation
      Walzenhauzen, Switzerland
    • Year and Date
      2012-11-05
    • Related Report
      2013 Final Research Report
  • [Presentation] Novel structure and reaction mechanism of EcoT38I restriction endonuclease2012

    • Author(s)
      Keiko KITA
    • Organizer
      FASEB Science Research Conference"Genome Engineering–Research & Applications"
    • Place of Presentation
      Lucca, Italy
    • Related Report
      2013 Final Research Report
  • [Presentation] Novel structure and reaction mechanism of EcoT38I restriction endonuclease2012

    • Author(s)
      喜多恵子
    • Organizer
      FASEB Science Research Conferences "Genome Engineering -Research & Applications"
    • Place of Presentation
      Lucca, Italy
    • Related Report
      2012 Research-status Report
  • [Presentation] Molecular engineering of a novel restriction endonuclease for creating new specificity2012

    • Author(s)
      喜多恵子
    • Organizer
      13th Swiss Japanese Conference on Biotechnology and Bioprocess Engineering
    • Place of Presentation
      Walzenhausen, Switzerland
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Molecular engineering of a novel restriction endonuclease EcoT38I

    • Author(s)
      Keiko KITA, Keigo NAKAMURA, Takahiro HIOKI, Akifumi UESUMI, and Bunzo MIKAMI
    • Organizer
      Conference on transposition and genome engineering 2013
    • Place of Presentation
      Budapest, Hungary
    • Related Report
      2013 Annual Research Report
  • [Presentation] DNA認識ドメインへの変異導入による制限酵素EcoT38Iの機能改変

    • Author(s)
      日置貴大 中村啓悟 喜多恵子
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      明治大学生田キャンパス
    • Related Report
      2013 Annual Research Report

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Published: 2013-05-31   Modified: 2019-07-29  

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