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Pathological Significance of modified nucleic acid base in human tissue.

Research Project

Project/Area Number 24659161
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Human pathology
Research InstitutionHamamatsu University School of Medicine

Principal Investigator

SUGIMURA Haruhiko  浜松医科大学, 医学部, 教授 (00196742)

Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2013: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2012: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
KeywordsDNA 付加体 / 修飾核酸 / 分子疫学 / etheno DNA adduct / demethylation / TET / TDG / IDH / 塩基修復 / DNA付加体 / DNA修飾 / 発がん / 修復遺伝子 / 胃がん / 人体病理
Research Abstract

Adductomics analysis of alkane substituted exocyclic etheno DNA adducts in human stomach mucosa having gastric cancer was performed for the cases from Lujiang County, Anhui, China, and from Hamamatsu, Japan. Discrimination analysis using quantitative value of 7 lipid per oxidation derived DNA adducts revealed that two regions showed distinctive adductome profile. 3 of 7 DNA adducts in this category were greater in Japanese gastric mucosa than Chinese gastric mucosa, which may suggest gastric carcinogenesis in Japan favor inflammatory or metabolic background. Furthermore, we quantitated 5'-hydroxymethyl deoxycytidine, and its derivatives carboxyl deoxycytidine, and formyl deoxycytidine in gastric cancer and adjacent non-tumor tissues and found the relationship between TET2 expression and 5hmdC. In this attempt we could not identify the adducts specifically high in endemic area of gastric cancer (Lujiang), thus further investigation is necessary.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (31 results)

All 2014 2013 2012 2011 Other

All Journal Article (20 results) (of which Peer Reviewed: 20 results,  Open Access: 3 results) Presentation (11 results) (of which Invited: 3 results)

  • [Journal Article] YB-1 promotes transcription of cyclin D1 in human non-small-cell lung cancers2014

    • Author(s)
      Harada, M., Kotake, Y., Ohhata, T., Kitagawa, K., Niida, H., Matsuura, S., Funai, K., Sugimura, H., Suda, T. and Kitagawa, M.
    • Journal Title

      Genes Cells

      Volume: 18 Issue: 6 Pages: 999-1006

    • DOI

      10.1111/gtc.12150

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] A rare Japanese case with a NUT midline carcinoma in the nasal cavity : A case report with immunohistochemical and genetic analyses2014

    • Author(s)
      Suzuki S, Sugimura H et al.
    • Journal Title

      Pathol Res Pract

      Volume: 210(6) Issue: 6 Pages: 383-8

    • DOI

      10.1016/j.prp.2014.01.013

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] An autopsy case of malignant pleural mesothelioma associated with nephrotic syndrome2014

    • Author(s)
      Suzuki S, Sugimura H et al.
    • Journal Title

      Intern Med

      Volume: 53(3) Pages: 243-6

    • NAID

      130003392643

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] A novel somatic FGFR3 mutation in primary lung cancer2014

    • Author(s)
      Shinmura K, Sugimura H et al.
    • Journal Title

      Oncol Rep

      Volume: 31(3) Issue: 3 Pages: 1219-24

    • DOI

      10.3892/or.2014.2984

    • Related Report
      2013 Final Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] TNK2 gene amplification is a novel predictor of a poor prognosis in patients with gastric cancer2014

    • Author(s)
      Shinmura K, Sugimura H et al.
    • Journal Title

      J Surg Oncol

      Volume: 109(3) Issue: 3 Pages: 189-97

    • DOI

      10.1002/jso.23482

    • Related Report
      2013 Final Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Breakages at YWHAE, FAM22A, and FAM22B loci in uterine angiosarcoma : a case report with immunohistochemical and genetic analysis2014

    • Author(s)
      Suzuki S, Sugimura H et al.
    • Journal Title

      Pathol Res Pract

      Volume: 210(2) Issue: 2 Pages: 130-4

    • DOI

      10.1016/j.prp.2013.09.009

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Sugimura H Establishment and characterization of a mutagenized cell line exhibiting the 'cell-in-cell' phenotype at a high frequency2013

    • Author(s)
      Kahyo T, Sugimura H
    • Journal Title

      Genes Cells

      Volume: 18(11) Issue: 11 Pages: 1042-52

    • DOI

      10.1111/gtc.12092

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] SGOL1 variant B induces abnormal mitosis and resistance to taxane in non-small cell lung cancers2013

    • Author(s)
      Matsuura S, Kahyo T, Shinmura K, Iwaizumi M, Yamada H, Funai K, Kobayashi J, Tanahashi M, Niwa H, Ogawa H, Takahashi T, Inui N, Suda T, Chida K, Watanabe Y, *Sugimura H.
    • Journal Title

      Sci Rep

      Volume: 3 Issue: 1 Pages: 3012-3012

    • DOI

      10.1038/srep03012

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] CD74-ROS1 fusion transcripts in resected non-small cell lung carcinoma2013

    • Author(s)
      Matsuura S, Sugimura H et al.
    • Journal Title

      Oncol Rep

      Volume: 30(4) Issue: 4 Pages: 1675-80

    • DOI

      10.3892/or.2013.2630

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Identification and association study with lung cancer for novel insertion polymorphisms of human endogenous retrovirus.2013

    • Author(s)
      Kahyo T, Sugimura H et al.
    • Journal Title

      Carcinogenesis.

      Volume: 34 Issue: 11 Pages: 2531-8

    • DOI

      10.1093/carcin/bgt253

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Accumulated phosphatidylcholine (16:0/16:1) in human colorectal cancer; possible involvement of LPCAT4.2013

    • Author(s)
      Kurabe N, Hayasaka T, Ogawa M, Masaki N, Yoshimi Ide Y, Waki M, Nakamura T, Kurachi K, Kahyo T, Shinmura K, Midorikawa Y, Sugiyama Y, Setou M, Sugimura H.
    • Journal Title

      Cancer Sci

      Volume: 104 Issue: 10 Pages: 1295-1302

    • DOI

      10.1111/cas.12221

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Early-onset diffuse gastric cancer associated with a de novo large genomic deletion of CDH1 gene2013

    • Author(s)
      Sugimoto S, Sugimura H et al.
    • Journal Title

      Gastric Cancer

      Volume: (Epub ahead of print)

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] D2-40-positive lymphatic vessel invasion is not a poor prognostic factor in stage I lung adenocarcinoma2013

    • Author(s)
      Shimizu K, Sugimura H et al.
    • Journal Title

      Pathol Int

      Volume: 63(4) Issue: 4 Pages: 201-5

    • DOI

      10.1111/pin.12048

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Visualization of phosphatidylcholine (16:0/16:0) in type II alveolar epithelial cells in the human lung using imaging mass spectrometry.2013

    • Author(s)
      Kurabe N, Sugimura H et al.
    • Journal Title

      Pathol Int.

      Volume: 63 Issue: 4 Pages: 195-200

    • DOI

      10.1111/pin.12050

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Internal frontier: the pathophysiology of the small intestine.2013

    • Author(s)
      Sugimura H and Osawa S
    • Journal Title

      World J Gastroenterol.

      Volume: 19 Issue: 2 Pages: 161-4

    • DOI

      10.3748/wjg.v19.i2.161

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Lipid peroxidation-induced DNA adducts in human gastric mucosa2012

    • Author(s)
      Matsuda T, Tao H, Goto M, Yamada H, Suzuki M, Wu Y, Xiao N, He Q, Guo W, Cai Z, Kurabe N, Ishino K, Matsushima Y, Shinmura K, Konno H, Maekawa M, Wang Y, Sugimura H
    • Journal Title

      Carcinogenesis

      Volume: 34 Issue: 1 Pages: 121-127

    • DOI

      10.1093/carcin/bgs327

    • Related Report
      2013 Annual Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Hepatocellular adenoma associated with familial adenomatous polyposis coli.2012

    • Author(s)
      Inaba K, Sakaguchi T, Kurachi K, Mori H, Tao, H, Nakamura T, Takehara Y, Baba S, Maekawa M, Sugimura H, Konno H
    • Journal Title

      World Journal of Hepatology

      Volume: 4(11) Issue: 11 Pages: 322-326

    • DOI

      10.4254/wjh.v4.i11.322

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Impaired suppressive activities of human MUTYH variant proteins against oxidative mutagenesis2012

    • Author(s)
      Shinmura K, Goto M, Tao H, Matsuura S, Matsuda T, Sugimura H
    • Journal Title

      World J Gastroenterol

      Volume: 18 Issue: 47 Pages: 6935-6942

    • DOI

      10.3748/wjg.v18.i47.6935

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] The CRKL gene encoding an adaptor protein is amplified, overexpressed, and a possible therapeutic target in gastric cancer2012

    • Author(s)
      Natsume H, Shinmura K, Tao H, Igarashi H, Suzuki M, Nagura K, Goto M, Yamada H, Maeda M, Konno H, Nakamura S, Sugimura H
    • Journal Title

      J Transl Med

      Volume: 10 Issue: 1 Pages: 97-97

    • DOI

      10.1186/1479-5876-10-97

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Detection of kinase amplifications in gastric cancer archives using fluorescence in situ hybridization2011

    • Author(s)
      Kiyose S, Nagura K, Tao H, Igarashi H, Yamada H, Goto M, Maeda M, Kurabe N, Suzuki M, Tsuboi M, Kahyo T, Shinmura K, Hattori N, Sugimura H
    • Journal Title

      Pathol Int

      Volume: 62 Issue: 7 Pages: 477-484

    • DOI

      10.1111/j.1440-1827.2012.02832.x

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] The origin of human cancer, a lesson from molecular epidemiology of gastric cancer2014

    • Author(s)
      Haruhiko Sugimura
    • Organizer
      101st Indian Science Congress
    • Place of Presentation
      Jammu, India
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Quantitative Analysis of 5-hydroxymethylcytosine in Gastric Cancer by Liquid Chromatography Coupled with Tandem Mass Spectrometry2013

    • Author(s)
      Du CP, Sugimura H
    • Organizer
      The 4^<th> JCA-AACR joint conference
    • Place of Presentation
      Tokyo bay Maihama Hotel Club Resort, Chiba, Japan
    • Related Report
      2013 Final Research Report
  • [Presentation] Germline CDH1 mutations and copy number alterations in hereditary and early onset diffuse gastric cancer2013

    • Author(s)
      Yamada H, Sugimura H et al.
    • Organizer
      The 4th JCA-AACR joint conference
    • Place of Presentation
      Tokyo bay Maihama Hotel Club Resort, Chiba, Japan
    • Related Report
      2013 Final Research Report
  • [Presentation] Towards the genetics and genomics of diffuse gastric cancer2013

    • Author(s)
      Sakamoto H, Sugimura H et al.
    • Organizer
      The 4th JCA-AACR joint conference
    • Place of Presentation
      Tokyo bay Maihama Hotel Club Resort, Chiba, Japan
    • Related Report
      2013 Final Research Report
  • [Presentation] Quantitative Analysis of 5-hydroxymethylcytosine in Gastric Cancer by Liquid Chromatography Coupled with Tandem Mass Spectrometry2013

    • Author(s)
      Du Chunping, Haruhiko Sugimura et al.
    • Organizer
      the 4th JCA-AACR Special Joint Conference
    • Place of Presentation
      Tokyo Bay Maihama Hotel Club Resort, Chiba, Japan
    • Related Report
      2013 Annual Research Report
  • [Presentation] Germline CDH1 copy changes in diffuse gastric cancer2013

    • Author(s)
      Yamada H, Sugimura H et al.
    • Organizer
      the 4th JCA-AACR Special Joint Conference
    • Place of Presentation
      Tokyo Bay Maihama Hotel Club Resort, Chiba, Japan
    • Related Report
      2013 Annual Research Report
  • [Presentation] Towards the Genetics and Genomics of Diffuse Gastric Cancer2013

    • Author(s)
      Hiromi Sakamoto, Haruhiko Sugimura et al.
    • Organizer
      the 4th JCA-AACR Special Joint Conference
    • Place of Presentation
      Tokyo Bay Maihama Hotel Club Resort, Chiba, Japan
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] DNA Adductome, an ultimate exposome of human tissue.2012

    • Author(s)
      椙村春彦他
    • Organizer
      AACR special conference, post GWAS horizon.
    • Place of Presentation
      Hollywood, FL, USA
    • Related Report
      2012 Research-status Report
  • [Presentation] The origin of human cancer, a lesson from molecular epidemiology of gastric cancer

    • Author(s)
      Sugimura H
    • Organizer
      The 101^<st> Indian Science Congress
    • Place of Presentation
      Jammu, India
    • Related Report
      2013 Final Research Report
  • [Presentation] DNA adductome : the most proximal exposome

    • Author(s)
      Sugimura H et al.
    • Organizer
      AACR special conference : Post-GWAS Horizons in Molecular Epidemiology : Digging Deeper into the Environment
    • Place of Presentation
      Hollywood, FL, USA
    • Related Report
      2013 Final Research Report
  • [Presentation] ヒトアダクトームについて

    • Author(s)
      椙村春彦
    • Organizer
      日本分子生物学会
    • Place of Presentation
      福岡市
    • Related Report
      2012 Research-status Report
    • Invited

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Published: 2013-05-31   Modified: 2019-07-29  

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