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Analyses of a novel type of autophagy

Research Project

Project/Area Number 24680038
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypePartial Multi-year Fund
Research Field Neuroscience in general
Research InstitutionNational Center of Neurology and Psychiatry

Principal Investigator

Kabuta Tomohiro  国立研究開発法人国立精神・神経医療研究センター, 神経研究所 疾病研究第四部, 室長 (70535765)

Project Period (FY) 2012-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥26,780,000 (Direct Cost: ¥20,600,000、Indirect Cost: ¥6,180,000)
Fiscal Year 2015: ¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2014: ¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2013: ¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2012: ¥7,280,000 (Direct Cost: ¥5,600,000、Indirect Cost: ¥1,680,000)
Keywordsリソソーム / オートファジー / RNA分解 / 選択的オートファジー / RNautophagy / DNautophagy / SIDT2 / DNA分解 / LAMP2 / LAMP2C / C9ORF72 / リピートRNA / 細胞内分解 / 膜蛋白質 / 選択的分解 / RNA / RNオートファジー
Outline of Final Research Achievements

A proper intracellular degradation of biological macromolecules is essential for the maintenance of biological homeostasis. Dysfunction of the degradation systems is thought to be involved in various diseases, such as neurodegenerative disorders. Therefore, it is important to clarify intracellular degradation systems. In this study, we discovered a novel degradation system, RNautophagy and DNautophagy, where RNA and DNA are directly taken up by lysosomes in an ATP-dependent manner and degraded, respectively. We also found that one of the physiological functions of RNautophagy is a constitutive degradation of intracellular RNA.

Report

(5 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (31 results)

All 2016 2015 2014 2013 2012 Other

All Journal Article (13 results) (of which Peer Reviewed: 13 results,  Open Access: 3 results,  Acknowledgement Compliant: 4 results) Presentation (13 results) (of which Invited: 7 results) Book (2 results) Remarks (1 results) Patent(Industrial Property Rights) (2 results) (of which Overseas: 1 results)

  • [Journal Article] Lysosomal putative RNA transporter SIDT2 mediates direct uptake of RNA by lysosomes2016

    • Author(s)
      Shu Aizawa, Yuuki Fujiwara, Viorica Raluca Contu, Katsunori Hase, Masayuki Takahashi, Hisae Kikuchi, Chihana Kabuta, Keiji Wada & Tomohiro Kabuta
    • Journal Title

      Autophagy

      Volume: 12 Issue: 3 Pages: 565-78

    • DOI

      10.1080/15548627.2016.1145325

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] RNautophagy/DNautophagy possesses selectivity for RNA/DNA substrates.2015

    • Author(s)
      Hase K, Fujiwara Y, Kikuchi H, Aizawa S, Hakuno F, Takahashi S, Wada K, Kabuta T.
    • Journal Title

      Nucleic Acids Res

      Volume: 43 Issue: 13 Pages: 6439-6449

    • DOI

      10.1093/nar/gkv579

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] An RNautophagy/DNautophagy receptor, LAMP2C, possesses an arginine-rich motif that mediates RNA/DNA-binding2015

    • Author(s)
      Fujiwara Y, Hase K, Wada K, Kabuta T.
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 460 Issue: 2 Pages: 281-286

    • DOI

      10.1016/j.bbrc.2015.03.025

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Lysosomal-associated membrane protein 2 Isoforms Are Differentially Affected in Early Parkinson's Disease.2015

    • Author(s)
      Murphy KE, Gysbers AM, Abbott SK, Spiro AS, Furuta A, Cooper A, Garner B, Kabuta T, Halliday GM
    • Journal Title

      Mov Disord

      Volume: in press Issue: 12 Pages: 1639-1647

    • DOI

      10.1002/mds.26141

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Property of lysosomal storage disease associated with midbrain pathology in the CNS of LAMP-2-deficient mice2015

    • Author(s)
      Furuta A, Kikuchi H, Fujita H, Yamada D, Fujiwara Y, Kabuta T, Nishino I, Wada K, Uchiyama Y
    • Journal Title

      Am J Pathol

      Volume: 巻未定

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Direct uptake and degradation of DNA by lysosomes2013

    • Author(s)
      Fujiwara Y, Kikuchi H, Aizawa S, Furuta A, Hatanaka Y, Konya C, Uchida K, Wada K, Kabuta T
    • Journal Title

      Autophagy

      Volume: 9 Issue: 8 Pages: 1167-71

    • DOI

      10.4161/auto.24880

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Ubiquitin C-terminal hydrolase L1 (UCH-L1) act as a novel potentiator of cyclin-dependent kinases to enhance cell proliferation, independent of its hydrolase activity2013

    • Author(s)
      Kabuta, T., Mitsui, T., Takahashi, M., Fujiwara, Y., Kabuta, C., Konya, C., Tsuchiya, Y., Hatanaka, Y., Uchida, K., Hohjoh, H., Wada, K
    • Journal Title

      J. Biol. Chem

      Volume: 288 Issue: 18 Pages: 12615-12626

    • DOI

      10.1074/jbc.m112.435701

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The AP-1 complex regulates intracellular localization of insulin receptor substrate 1, which is required for insulin-like growth factor I-dependent cell proliferation2013

    • Author(s)
      Yosuke Yoneyama
    • Journal Title

      Molecular and Cellular Biology

      Volume: Volume 33 Issue: 10 Pages: 1991-2003

    • DOI

      10.1128/mcb.01394-12

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] TDP-43 associates with stalled ribosomes and contributes to cell survival during cellular stress2013

    • Author(s)
      Higashi S., Kabuta T., Nagai Y., Tsuchiya Y., Akiyama H., Wada K
    • Journal Title

      J. Neurochem

      Volume: 126(2) Issue: 2 Pages: 288-300

    • DOI

      10.1111/jnc.12194

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Discovery of a novel type of autophagy targeting RNA2013

    • Author(s)
      Fujiwara Y, Furuta A, Kikuchi H, Aizawa S, Hatanaka Y, Konya C, Uchida K, Yoshimura A, Tamai Y, Wada K, Kabuta T
    • Journal Title

      Autophagy

      Volume: 9 Issue: 3 Pages: 403-9

    • DOI

      10.4161/auto.23002

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Lysosomal storage and advanced senescence in the brain of LAMP-2-deficient Danon disease2013

    • Author(s)
      Furuta A, Wakabayashi K, Haratake J, Kikuchi H, Kabuta T, Mori F, Tokonami F, Katsumi Y, Tanioka F, Uchiyama Y, Nishino I, Wada K
    • Journal Title

      Acta Neuropathol

      Volume: 125 Issue: 3 Pages: 459-461

    • DOI

      10.1007/s00401-012-1075-4

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Guideline for the use and interpretation of assays for monitoring autophagy2012

    • Author(s)
      Klionsky DJ,et al
    • Journal Title

      Autophagy

      Volume: 8 Issue: 4 Pages: 445-544

    • DOI

      10.4161/auto.19496

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A novel 4EHP-GIGYF2 translational repressor complex is essential for mammalian development.2012

    • Author(s)
      Morita M, Ler LW, Fabian MR, Siddiqui N, Mullin M, Henderson VC, Alain T, Fonseca BD, Karashchuk G, Bennett CF, Kabuta T, Higashi S, Larsson O, Topisirovic I, Smith RJ, Gingras AC, Sonenberg N.
    • Journal Title

      Mol Cell Biol

      Volume: 32 Issue: 17 Pages: 3585-3593

    • DOI

      10.1128/mcb.00455-12

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] RNautophagy/DNautophagyのメカニズム2015

    • Author(s)
      株田智弘
    • Organizer
      第67回日本細胞生物学会大会
    • Place of Presentation
      タワーホール船堀(東京)
    • Year and Date
      2015-06-30
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Direct uptake and degradation of RNA/DNA by lysosomes2014

    • Author(s)
      Kabuta T
    • Organizer
      The 16th Norteastern Asian Symposium on Autophagy
    • Place of Presentation
      The Westin Chosun Busan Hotel, Busan, Republic of Korea
    • Year and Date
      2014-12-18 – 2014-12-21
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] RNautophagy/DNautophagyの分子メカニズム2014

    • Author(s)
      株田智弘
    • Organizer
      第8回オートファジー研究会・文部科学省科学研究費補助金「新学術領域」オートファジーの集学的研究 分子基盤から疾患まで 第2回班会議
    • Place of Presentation
      札幌、シャトレーゼ ガトーキングダム サッポロ
    • Year and Date
      2014-11-09 – 2014-11-11
    • Related Report
      2014 Annual Research Report
  • [Presentation] A Novel Type of autophagy targeting RNA and its possible involvement in Danon disease2014

    • Author(s)
      Kabuta T
    • Organizer
      Max Planck Institute & National Center of Neurology and Psychiatry Joint Symposium
    • Place of Presentation
      The Prince Hakone, Hakone
    • Year and Date
      2014-11-05 – 2014-11-07
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] リソソームにおける新たな核酸分解システム2014

    • Author(s)
      株田智弘
    • Organizer
      第87回日本生化学会大会
    • Place of Presentation
      京都、国立京都国際会館
    • Year and Date
      2014-10-15 – 2014-10-18
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 精神疾患の病因に関与する物質・因子の解析:テストステロンおよびリソソーム分解との関連性について2014

    • Author(s)
      株田智弘, 畑中悠佑, 和田圭司
    • Organizer
      第36回日本生物学的精神医学会・第57回日本神経化学会合同年会
    • Place of Presentation
      奈良、奈良県新公会堂
    • Year and Date
      2014-09-29 – 2014-10-01
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 新たなオートファジーシステムRNautophagyの発見とそのメカニズム2014

    • Author(s)
      株田智弘
    • Organizer
      大阪大学蛋白質研究所セミナー オートファジーと疾患
    • Place of Presentation
      大阪、大阪大学蛋白質研究所
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Discovery of Novel RNA/DNA degradation systems2014

    • Author(s)
      Fujiwara Y, Wada K, Kabuta T
    • Organizer
      New Frontier of Molecular Neuropathology 2014
    • Place of Presentation
      Tokyo, Tokyo Medical and Dental University, M&D Tower
    • Related Report
      2013 Annual Research Report
  • [Presentation] A Novel Type of Autophagy that Targets RNA. Keystone Symposia on Molecular and Cellular Biology2013

    • Author(s)
      Fuji war a Y, Furuta A, Kikuchi H, Aizawa S, Hatanaka Y, Konya C, Uchida K, Wada K, Kabuta T.
    • Organizer
      Keystone Symposia on Molecular and Cellular Biology, Autophagy, Inflammation and Immunity
    • Place of Presentation
      Fairmont The Queen Elizabeth Montreal, Canada
    • Year and Date
      2013-02-18
    • Related Report
      2012 Annual Research Report
  • [Presentation] 新規核酸分解システムRNautophagy/DNautophagy2013

    • Author(s)
      株田智弘
    • Organizer
      第7回オートファジー研究会
    • Place of Presentation
      静岡、ヤマハリゾートつま恋カンファレンスセンター
    • Related Report
      2013 Annual Research Report
  • [Presentation] 脳におけるRNAを標的とした新規オートファジー経路2013

    • Author(s)
      藤原悠紀, 和田圭司, 株田智弘
    • Organizer
      Neuro2013
    • Place of Presentation
      京都、京都国際会館
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Direct Uptake and Degradation of RNA by Lysosomes2013

    • Author(s)
      Fujiwara Y, Wada K, Kabuta T
    • Organizer
      EMBO Conference: Autophagy: molecular mechanism, physiology and pathology
    • Place of Presentation
      Norway, Hurtigruten MS Trollfjord
    • Related Report
      2013 Annual Research Report
  • [Presentation] RNAを標的とする新たなオートファジー機構2012

    • Author(s)
      藤原悠紀, 古田晶子, 菊地寿枝, 相澤修, 畑中悠佑, 紺谷千穂, 内田健康, 和田圭司, 株田智弘
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡国際会議場、福岡
    • Year and Date
      2012-12-11
    • Related Report
      2012 Annual Research Report
  • [Book] Autophagy: Cancer, Other Pathologies, Inflammation, Immunity, Infection, and Aging2013

    • Author(s)
      Kabuta T, Fujiwara Y, Wada K
    • Total Pages
      8
    • Publisher
      Elsevier
    • Related Report
      2013 Annual Research Report
  • [Book] 生化学2013

    • Author(s)
      株田智弘、藤原悠紀、和田圭司
    • Total Pages
      10
    • Publisher
      日本生化学会
    • Related Report
      2013 Annual Research Report
  • [Remarks]

    • URL

      http://www.ncnp.go.jp/nin/guide/r4/index.html

    • Related Report
      2012 Annual Research Report
  • [Patent(Industrial Property Rights)] 異常核酸分解誘導剤2015

    • Inventor(s)
      株田智弘, 藤原悠紀, 和田圭司, 相澤修, 長谷勝徳
    • Industrial Property Rights Holder
      国立精神・神経医療研究センター
    • Industrial Property Rights Type
      特許
    • Filing Date
      2015-10-09
    • Related Report
      2015 Annual Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] 異常核酸分解誘導剤2014

    • Inventor(s)
      株田智弘, 藤原悠紀, 和田圭司, 相澤修, 長谷勝徳
    • Industrial Property Rights Holder
      国立精神・神経医療研究センター
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2014-209340
    • Filing Date
      2014-10-10
    • Related Report
      2014 Annual Research Report

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Published: 2012-04-24   Modified: 2019-07-29  

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