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Structural basis for the ion channel anchoring of ankyrinG

Research Project

Project/Area Number 24689012
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypePartial Multi-year Fund
Research Field General physiology
Research InstitutionOsaka University

Principal Investigator

FUJIWARA YUICHIRO  大阪大学, 医学(系)研究科(研究院), 准教授 (20532980)

Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥26,910,000 (Direct Cost: ¥20,700,000、Indirect Cost: ¥6,210,000)
Fiscal Year 2013: ¥13,520,000 (Direct Cost: ¥10,400,000、Indirect Cost: ¥3,120,000)
Fiscal Year 2012: ¥13,390,000 (Direct Cost: ¥10,300,000、Indirect Cost: ¥3,090,000)
Keywords興奮収縮連関 / 跳躍伝導 / イオンチャネル / 構造機能連関 / パルミトイル化 / アンキリン / 軸索起始部
Outline of Final Research Achievements

Ankyrin-G (AnkG) configures the membrane-excitation platform by clustering various ion channels in neurons and cardiomyocytes. AnkG itself localizes to the specific areas on the plasma membrane via the s-palmitoylation of Cys. However, the structural mechanism how AnkG anchors to the membrane is not understood. In this study, we solved the crystal structures of the s-palmitoylation domain of AnkG in reduced and oxidized forms of the Cys, and performed the long-term molecular dynamics simulation of the membrane association. Here we report that the s-palmitoylation facilitated the membrane anchoring of AnkG, defining a stable binding interface to the plasma membrane. AnkG without s-palmitoylation was apparently in contact with the membrane but did not have a unique binding interface. These suggest that AnkG is ready to accept the Cys modification in the juxtamembrane region, and, once it happens, constitutes the rigid structural base of the membrane-excitation platform.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (32 results)

All 2015 2014 2013 2012 Other

All Journal Article (8 results) (of which Peer Reviewed: 8 results,  Open Access: 5 results) Presentation (18 results) (of which Invited: 6 results) Book (1 results) Remarks (5 results)

  • [Journal Article] Gating Mechanisms of Voltage-Gated Proton Channels2015

    • Author(s)
      Yasushi Okamura, Yuichiro Fujiwara, Souhei Sakata
    • Journal Title

      Annual Reviews of Biochemistry

      Volume: 84

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Temperature-sensitive gating of voltage-gated proton channels2014

    • Author(s)
      Fujiwara Y, Okamura Y.
    • Journal Title

      Current Topics in Membranes

      Volume: 74 Pages: 259-292

    • DOI

      10.1016/b978-0-12-800181-3.00010-5

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Long α-helices projecting from the membrane as the dimer interface in the voltage-gated H+ channel2014

    • Author(s)
      Fujiwara Y., Kurokawa T., Okamura Y.
    • Journal Title

      Journal of General Physiology

      Volume: 143 Issue: 3 Pages: 377-386

    • DOI

      10.1085/jgp.201311082

    • Related Report
      2014 Annual Research Report 2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] X-ray crystal structure of voltage-gated proton channel2014

    • Author(s)
      Takeshita K, Sakata S, Yamashita E, Fujiwara Y, Kawanabe A, Kurokawa T, Okochi Y, Matsuda M, Narita H, Okamura Y & Nakagawa A
    • Journal Title

      Nat. Strucl. & Mol. Biol.

      Volume: (4) Issue: 4 Pages: 352-7

    • DOI

      10.1038/nsmb.2783

    • Related Report
      2014 Annual Research Report 2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Gating of the Designed Trimeric/Tetrameric Voltage-Gated H+ Channel2013

    • Author(s)
      Fujiwara Y., Kurokawa T., Takeshita K., Nakagawa A., Larsson HP., Okamura Y.
    • Journal Title

      Journal of Physiology

      Volume: 591 Issue: 3 Pages: 627-640

    • DOI

      10.1113/jphysiol.2012.243006

    • Related Report
      2013 Annual Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structural characteristics of the redox-sensing coiled coil in the voltage-gated H+ channel.2013

    • Author(s)
      Fujiwara Y, Takeshita K, Nakagawa A, Okamura Y
    • Journal Title

      J Biol Chem.

      Volume: 288(25) Issue: 25 Pages: 17968-75

    • DOI

      10.1074/jbc.m113.459024

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Structure and function of dimeric assembly in voltage-gated H+ channel2013

    • Author(s)
      Fujiwara Y., Nakagawa A., Okamura Y.
    • Journal Title

      Spring-8 Research Frontiers 2012

      Volume: 2012 Pages: 14-15

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The cytoplasmic coiled-coil mediates cooperative gating temperature sensitivity in the voltage-gated H+ channel Hv12012

    • Author(s)
      Fujiwara Y, Kurokawa T, Takeshita K, Kobayashi M, Okochi Y, Nakagawa A & Okamura Y
    • Journal Title

      Nat. Communi.

      Volume: 3 Issue: 1 Pages: 816-816

    • DOI

      10.1038/ncomms1823

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] 電位依存性 H+ チャネルS4領域のトリプトファン残基が2量体間で協同し脱活性化のキネティクスを遅くする2015

    • Author(s)
      奥田 裕子、米澤 康滋、鷹野 優、岡村 康司、藤原 祐一郎
    • Organizer
      第120回日本解剖学会総会・全国学術集会 第92回日本生理学会大会 合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2015-03-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] 電位依存性プロトンチャネルの結晶構造2015

    • Author(s)
      竹下 浩平、坂田 宗平、山下 栄樹、藤原 祐一郎、岡村 康司、中川 敦史
    • Organizer
      第120回日本解剖学会総会・全国学術集会 第92回日本生理学会大会 合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2015-03-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] Voltage-gated H+ channel dimer: from molecular structure to physiological function2015

    • Author(s)
      Yuichiro Fujiwara, Yasushi Okamura
    • Organizer
      「統合的多階層生体機能学領域の確立とその応用」領域終了記念シンポジウム
    • Place of Presentation
      大阪
    • Year and Date
      2015-03-06
    • Related Report
      2014 Annual Research Report
  • [Presentation] 電位依存性H+チャネルのゲート電流2014

    • Author(s)
      藤原 祐一郎、岡村 康司
    • Organizer
      第52回日本生物物理学会年会
    • Place of Presentation
      札幌
    • Year and Date
      2014-09-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] イオンチャネルアンカー蛋白質(アンキリンG)の細胞膜接着機構の構造基盤2014

    • Author(s)
      藤原 祐一郎、近藤寛子、城田 松之、小林 恵、竹下 浩平、中川 敦史、岡村 康司、木下 賢吾
    • Organizer
      第37回日本神経科学大会
    • Place of Presentation
      横浜
    • Year and Date
      2014-09-11
    • Related Report
      2014 Annual Research Report
  • [Presentation] 電位依存性プロトンチャネル VSOP/Hv1 の動作原理2014

    • Author(s)
      岡村康司、藤原祐一郎、川鍋陽、坂田宗平、黒川竜紀
    • Organizer
      第91回日本生理学会大会
    • Place of Presentation
      鹿児島
    • Year and Date
      2014-03-18
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Voltage Sensing Mechanism in the Voltage-Gated H+ Channel2014

    • Author(s)
      藤原祐一郎、岡村康司
    • Organizer
      第91回日本生理学会大会
    • Place of Presentation
      鹿児島
    • Year and Date
      2014-03-16
    • Related Report
      2013 Annual Research Report
  • [Presentation] 電位依存性H+ チャネルのゲーティングに対するS4領域の構造基盤2014

    • Author(s)
      奥田裕子、岡村康司、藤原祐一郎
    • Organizer
      第91回日本生理学会大会
    • Place of Presentation
      鹿児島
    • Year and Date
      2014-03-16
    • Related Report
      2013 Annual Research Report
  • [Presentation] Long alpha-helices projecting from the membrane as the dimer interface in the voltage-gated H+ channel2014

    • Author(s)
      藤原祐一郎、黒川竜紀、岡村康司
    • Organizer
      第58回米国生物物理学会大会
    • Place of Presentation
      San Francisco(米国)
    • Year and Date
      2014-02-19
    • Related Report
      2013 Annual Research Report
  • [Presentation] X-RAY CRYSTAL STRUCTURE OF VOLTAGE GATED PROTON CHANNEL2014

    • Author(s)
      竹下浩平、坂田宗平、山下栄樹、藤原祐一郎、川鍋陽、黒川竜紀、大河内善 史、松田真、 成田宏隆、岡村康司、中川敦史
    • Organizer
      第58回米国生物物理学会大会
    • Place of Presentation
      San Francisco(米国)
    • Year and Date
      2014-02-19
    • Related Report
      2013 Annual Research Report
  • [Presentation] Structural Characteristics of the Redox Sensing Coiled-coil in the Voltage-gated H+ Channel2013

    • Author(s)
      藤原祐一郎、竹下浩平、中川敦史、岡村康司
    • Organizer
      第2回 HD Physiology 国際シンポジウム
    • Place of Presentation
      東京
    • Year and Date
      2013-06-28 – 2013-06-29
    • Related Report
      2013 Annual Research Report
  • [Presentation] Continuous α-helices of S4 and coiled-coil form the dimer interface in the voltage-gated H+ channel2013

    • Author(s)
      藤原祐一郎、黒川竜紀、岡村康司
    • Organizer
      第2回 HD Physiology 国際シンポジウム
    • Place of Presentation
      東京
    • Year and Date
      2013-06-28 – 2013-06-29
    • Related Report
      2013 Annual Research Report
  • [Presentation] Molecular diversities of voltage sensing: from ion permeation to enzyme2013

    • Author(s)
      岡村康司、藤原祐一郎、坂田宗平、河合喬文、筒井秀和、大河内善史
    • Organizer
      Neuro2013
    • Place of Presentation
      京都
    • Year and Date
      2013-06-20
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Crystal Structure of AnkyrinG: the Ion Channel Anchoring Protein2013

    • Author(s)
      Fujiwara Y., Okamura Y.
    • Organizer
      Neuro2013
    • Place of Presentation
      京都
    • Year and Date
      2013-06-20
    • Related Report
      2013 Annual Research Report
  • [Presentation] Regulatory roles of the dimeric structure in the voltage-gated H+ channel2013

    • Author(s)
      藤原祐一郎、黒川竜紀、竹下浩平、小林恵、中川敦史、岡村康司
    • Organizer
      第90回 日本生理学会大会
    • Place of Presentation
      東京
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 電位依存性プロトンチャネルのゲーティングを制御する分子機構2012

    • Author(s)
      藤原祐一郎、黒川竜紀、竹下浩平、中川敦史、岡村康司
    • Organizer
      生理研研究所「温熱生理研究会」
    • Place of Presentation
      岡崎
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 電位依存性H+チャネルのゲーティングと構造基盤2012

    • Author(s)
      藤原祐一郎、黒川竜紀、岡村康司
    • Organizer
      生理研研究会「膜機能分子の機能・構造ゆらぎの時空間スペク トル解析」
    • Place of Presentation
      岡崎
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 電位依存性H+チャネルの二量体化による活性制御とその構造基盤2012

    • Author(s)
      藤原祐一郎
    • Organizer
      第3回 神経科学と構造生物学の融合研究
    • Place of Presentation
      大阪
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Book] 脳科学辞典(電子書籍) 分担執筆 「膜電位センサー」2012

    • Author(s)
      藤原祐一郎、岡村康司
    • Publisher
      理化学研究所
    • Related Report
      2012 Annual Research Report
  • [Remarks] 電位依存性H+チャネル2量体会合領域の結晶構造とその機能的意義(日本生理学会HP)

    • URL

      http://physiology.jp/exec/page/page20120517165828/

    • Related Report
      2012 Annual Research Report
  • [Remarks] 電位依存性H+チャネルの最適に設計された2量体構造と機能(日本生理学会HP)

    • URL

      http://physiology.jp/exec/page/stopics84/

    • Related Report
      2012 Annual Research Report
  • [Remarks] 体温をあげて細菌から身を守る仕組みがわかった(SPring-8広報)

    • URL

      http://www.spring8.or.jp/ja/news_publications/research_highlights/no_67/

    • Related Report
      2012 Annual Research Report
  • [Remarks] 水素イオンを通すタンパク質がペアで働く仕組みを原子レベルで解明! (大阪大学HP)

    • URL

      http://www.osaka-u.ac.jp/ja/news/ResearchRelease/2012/05/20120509_1

    • Related Report
      2012 Annual Research Report
  • [Remarks] 水素イオンを通すタンパク質がペアで働く仕組みを原子レベルで解明!(SPring-8HP)

    • URL

      http://www.spring8.or.jp/ja/news_publications/press_release/2012/120509

    • Related Report
      2012 Annual Research Report

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Published: 2012-04-24   Modified: 2019-07-29  

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