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Statistical analysis of hierarchical structure of neural spike trains

Research Project

Project/Area Number 24700287
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Statistical science
Research InstitutionThe Institute of Statistical Mathematics

Principal Investigator

KOYAMA Shinsuke  統計数理研究所, 大学共同利用機関等の部局等, 准教授 (20589999)

Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Fiscal Year 2014: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2013: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2012: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Keywordsスパイク時系列解析 / 点過程 / ゆらぎのスケーリング則 / 積分発火モデル / 統計神経科学 / 揺らぎのスケーリング則 / 神経スパイク時系列 / 確率点過程 / 国際情報交換 チェコ
Outline of Final Research Achievements

We propose a statistical framework for modeling the non-Poisson variability of spike trains observed in a wide range of brain regions. Central to our approach is the assumption that the variance and the mean of ISIs are related by a power function characterized by two parameters: the scale factor and exponent. This single assumption allows the variability of spike trains to have an arbitrary scale and various dependencies on the firing rate in the spike count statistics, as well as in the interval statistics, depending on the two parameters of the power function. On the basis of this statistical assumption, we show that the power function relationship between the mean and variance of ISIs with various exponents emerges in a leaky integrate-and-fire model under certain conditions. We also propose a statistical model for spike trains that exhibits the variance-to-mean power relationship, and a maximum likelihood method is developed for inferring the parameters.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (20 results)

All 2015 2014 2013 2012

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (17 results)

  • [Journal Article] The effect of interspike interval statistics on the information gain under the rate coding hypothesis2014

    • Author(s)
      Shinsuke Koyama and Lubomir Kostal
    • Journal Title

      Mathematical Biosciences and Engineering

      Volume: 11 Pages: 63-80

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Coding efficiency and detectability of rate fluctuations with non-Poisson neuronal firing2013

    • Author(s)
      Shinsuke Koyama
    • Journal Title

      Advances in Neural Information Processing Systems

      Volume: 25 Pages: 180-188

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Information transmission using non-Poisson regular firing2013

    • Author(s)
      S. Koyama, T. Omi, R. E. Kass and S. Shinomoto
    • Journal Title

      Neural Computation

      Volume: 25 Pages: 854-876

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] 神経細胞の発火特性がISIスケーリング則に与える影響について2015

    • Author(s)
      小山慎介
    • Organizer
      本物理学会第70回年次大会
    • Place of Presentation
      早稲田大学早稲田キャンパス
    • Year and Date
      2015-03-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] Fluctuation scaling in neural spike trains2014

    • Author(s)
      Shinsuke Koyama
    • Organizer
      11th Neural Coding Workshop
    • Place of Presentation
      Versailles, France
    • Year and Date
      2014-10-09
    • Related Report
      2014 Annual Research Report
  • [Presentation] 確率点過程における揺らぎのスケーリング則2014

    • Author(s)
      小山慎介
    • Organizer
      統計関連学会連合大会
    • Place of Presentation
      東京大学本郷キャンパス
    • Year and Date
      2014-09-14
    • Related Report
      2014 Annual Research Report
  • [Presentation] Fluctuation scaling in neural spike trains2014

    • Author(s)
      Shinsuke Koyama
    • Organizer
      Computational Neuroscience (CNS) 2014
    • Place of Presentation
      Quebec, Canada
    • Year and Date
      2014-07-28
    • Related Report
      2014 Annual Research Report
  • [Presentation] Information gain on variable neuronal firing2014

    • Author(s)
      Shinsuke Koyama
    • Organizer
      ISI-ISM-ISSAS Joint Conference 2014
    • Place of Presentation
      Delhi, India
    • Related Report
      2013 Research-status Report
  • [Presentation] 確率点過程における揺らぎのスケーリング則2014

    • Author(s)
      小山慎介
    • Organizer
      日本物理学会春期大会
    • Place of Presentation
      東海大学湘南キャンパス, 神奈川
    • Related Report
      2013 Research-status Report
  • [Presentation] The effect of interstice interval statistics on the information gain under the rate coding hypothesis2013

    • Author(s)
      Shinsuke Koyama
    • Organizer
      Neural Coding: Information beyond Shannon
    • Place of Presentation
      Prague, Czech Republic
    • Related Report
      2013 Research-status Report
  • [Presentation] Information gain on variable neuronal firing rate2013

    • Author(s)
      Shinsuke Koyama
    • Organizer
      Computational Neuroscience Meeting (CNS2013)
    • Place of Presentation
      Paris, France
    • Related Report
      2013 Research-status Report
  • [Presentation] Bayesian Interpolation of Random Point Events: A Path Integral Analysis2013

    • Author(s)
      Shinsuke Koyama
    • Organizer
      29th European Meeting of Statisticians (EMS2013)
    • Place of Presentation
      Budapest, Hungary
    • Related Report
      2013 Research-status Report
  • [Presentation] Information gain on variable neuronal firing rate2013

    • Author(s)
      Shinsuke Koyama
    • Organizer
      Society for Neuroscience (SfN)
    • Place of Presentation
      San Diego, CA, USA
    • Related Report
      2013 Research-status Report
  • [Presentation] 変動発火レートの情報伝送2013

    • Author(s)
      小山慎介
    • Organizer
      Neuro2013
    • Place of Presentation
      国立京都国際会館, 京都
    • Related Report
      2013 Research-status Report
  • [Presentation] 平均と分散のスケーリング関係を持つ非定常点過程モデルと神経スパイク時系列データへの応用2013

    • Author(s)
      小山慎介
    • Organizer
      統計関連学会連合大会
    • Place of Presentation
      大阪大学豊中キャンパス, 大阪
    • Related Report
      2013 Research-status Report
  • [Presentation] 神経スパイク時系列における揺らぎのスケーリング則2013

    • Author(s)
      小山慎介
    • Organizer
      定量生物学の会第六会年会
    • Place of Presentation
      大阪大学吹田キャンパス, 大阪
    • Related Report
      2013 Research-status Report
  • [Presentation] On the information capacity of spike trains and detectability of rate fluctuations2013

    • Author(s)
      S. Koyama
    • Organizer
      Computational and Systems Neuroscience (Cosyne) 2013
    • Place of Presentation
      Utah, USA
    • Related Report
      2012 Research-status Report
  • [Presentation] スパイク間隔分布のスケール族に対するフィッシャー情報量とニューラルコーティングへの関連について2013

    • Author(s)
      小山慎介
    • Organizer
      日本物理学会第68回年次大会
    • Place of Presentation
      広島
    • Related Report
      2012 Research-status Report
  • [Presentation] Coding efficiency and detectability of rate fluctuations with non-Poisson neuronal firing2012

    • Author(s)
      S. Koyama
    • Organizer
      10th International Neural Coding Workshop
    • Place of Presentation
      Prague, Czech Republic
    • Related Report
      2012 Research-status Report
  • [Presentation] Coding efficiency and detectability of rate fluctuations with non-Poisson neuronal firing2012

    • Author(s)
      S. Koyama
    • Organizer
      Advances in Neural Information Processing Systems (NIPS) 2012
    • Place of Presentation
      Nevada, USA
    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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