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Investigation into novel splicing targets of Nucleophosmin

Research Project

Project/Area Number 24700974
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Tumor biology
Research InstitutionJapan Advanced Institute of Science and Technology

Principal Investigator

SUZUKI Hitoshi  北陸先端科学技術大学院大学, マテリアルサイエンス研究科, 特任助教 (00447690)

Research Collaborator TSUKAHARA Toshifumi  
MAYEDA Akila  
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2014: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2013: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2012: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords選択的スプライシング / ヌクレオフォスミン / 細胞周期
Outline of Final Research Achievements

NPM (Nucleophosmin) is a multifunctional protein, such as a regulator of the centrosome duplication. It was reported that the phospho-Thr(199) NPM departed the centrosome and localized into the nuclear speckle. Also, this protein had a repressive activity of the pre-mRNA splicing in vitro. However, the regulation of alternative splicing by NPM was unclear. Using total RNAs of the cells over-expressing T199D-NPM (that imitates functionalities of phospho-Thr(199) NPM), we carried out the Exon Array analysis to identify splicing targets of NPM. Unfortunately, the validation by the RT-PCR suggested that most extracted exons were not actual target exons of NPM. Nevertheless, several alternative exons including the splicing events of a cell cycle-related G-protein and a leukemia-related transcription factor were obtained as potential targets of NPM. These may play critical roles in the alternative splicing by NPM.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (10 results)

All 2014 2013

All Journal Article (4 results) (of which Peer Reviewed: 4 results,  Open Access: 3 results,  Acknowledgement Compliant: 3 results) Presentation (5 results) (of which Invited: 2 results) Book (1 results)

  • [Journal Article] A View of Pre-mRNA Splicing from RNase R Resistant RNAs2014

    • Author(s)
      Suzuki H, Tsukahara T
    • Journal Title

      Int. J. Mol. Sci.

      Volume: 15 Issue: 6 Pages: 9331-9342

    • DOI

      10.3390/ijms15069331

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Alternative splicing regulation of APP exon 7 by RBFox proteins2014

    • Author(s)
      Alam S, Suzuki H, Tsukahara T
    • Journal Title

      Neurochem. Int.

      Volume: 78 Pages: 7-17

    • DOI

      10.1016/j.neuint.2014.08.001

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Computational extraction of a neural molecular network through alternative splicing2014

    • Author(s)
      Alam S, Phan HT, Okazaki M, Takagi M, Kawahara K, Tsukahara T, Suzuki H
    • Journal Title

      BMC Res. Notes

      Volume: 7 Issue: 1 Pages: 934-934

    • DOI

      10.1186/1756-0500-7-934

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Nested introns in an intron : Evidence of multi-step splicing in a large intron of the human dystrophin pre-mRNA.2013

    • Author(s)
      Suzuki, H., Kameyama, T., Ohe, K. Tsukahara, T., Mayeda, A.
    • Journal Title

      FEBS Letters

      Volume: 587 Issue: 6 Pages: 555-561

    • DOI

      10.1016/j.febslet.2013.01.057

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] 環状型転写産物の包括的理解に向けたDMD遺伝子ホットスポットの解析2014

    • Author(s)
      鈴木 仁、亀山俊樹、前田 明、塚原俊文
    • Organizer
      第37回 日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜 (神奈川県 横浜市)
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] Circular RNAとスプライシング2014

    • Author(s)
      鈴木 仁
    • Organizer
      第一回北陸エピジェネティクス研究会
    • Place of Presentation
      金沢大学付属医学部図書館 十全記念スタジオ (石川県 金沢市)
    • Year and Date
      2014-11-18 – 2014-11-19
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Circular RNA and multiexon-skipping in the DMD gene hotspot2014

    • Author(s)
      Suzuki H
    • Organizer
      RIKEN Symposium/15 th Tokyo RNA Club, Noncoding RNA Regulation
    • Place of Presentation
      理化学研究所和光キャンパス 鈴木梅太郎ホール (埼玉県 和光市)
    • Year and Date
      2014-10-01
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] RBFoxによるAPP遺伝子exon7のスプライシング制御2014

    • Author(s)
      アラム シャフュール、鈴木 仁、塚原俊文
    • Organizer
      第16回日本RNA学会年会
    • Place of Presentation
      ウインクあいち(愛知県 名古屋市)
    • Year and Date
      2014-07-22 – 2014-07-24
    • Related Report
      2014 Annual Research Report
  • [Presentation] DMD遺伝子のホットスポットのスキップ産物とcircRNA2013

    • Author(s)
      鈴木 仁、亀山俊樹、前田 明、塚原俊文
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      愛媛県松山市
    • Related Report
      2013 Research-status Report
  • [Book] New Development in Alternative Splicing Research; Comprehensive analyses of alternative exons in neuronally differentiated P19 cells.2013

    • Author(s)
      Suzuki H. and Tsukahara T.
    • Total Pages
      20
    • Publisher
      NOVA Science Publishers
    • Related Report
      2013 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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