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Molecular function of Krimp in piRNA biogenesis in Drosophila

Research Project

Project/Area Number 24710218
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Genome biology
Research InstitutionThe University of Tokyo

Principal Investigator

SATO Kaoru  東京大学, 理学(系)研究科(研究院), 助教 (20548507)

Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2013: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Fiscal Year 2012: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
KeywordsRNAサイレンシング / piRNA / トランスポゾン / 生殖細胞 / Krimp / ショウジョウバエ / RNA干渉 / 細胞内顆粒 / 国際情報交換
Research Abstract

piRNA is a germline-specific class of small non-coding RNA, and functions by specifically interacting with PIWI proteins. In germline cells, piRNA thereby suppresses the expression of transposable elements, so piRNA is thought to protect the germline genome from such harmful element. piRNAs are thought to be produced by two distinct mechanisms, primary pathway and secondary pathway. A Drosophila PIWI protein AGO3 interacts with piRNAs produced only by the secondary pathway. In this study, I found that a Drosophila piRNA factor Krimper (Krimp) specifically interacts with AGO3 and regulates its piRNA production, indicating that Krimp is a factor regulating the secondary pathway. In addition, I found that Krimp regulates piRNAs are not loaded on AGO3 by the primary pathway.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (13 results)

All 2014 2013 2012 Other

All Presentation (10 results) (of which Invited: 2 results) Remarks (3 results)

  • [Presentation] Essential roles of a Tudor domain-containing protein2014

    • Author(s)
      佐藤薫, 岩崎由香, 渋谷あおい, Piero Carninci, 石津弘嗣, 塩見美喜子, 塩見春彦
    • Organizer
      Krimper, in piRNA biogenesis in Drosophila ovaries 2014 Keystone Symposia Conference - A9: RNA Silencing
    • Place of Presentation
      Sheraton Seattle Hotel, Seattle, Washington, USA
    • Related Report
      2013 Final Research Report
  • [Presentation] Essential roles of a Tudor domain-containing protein, Krimper, in piRNA biogenesis in Drosophila ovaries2014

    • Author(s)
      Kaoru Sato, Yuka W Iwasaki, Aoi Shibuya, Piero Carninci, Hirotsugu Ishizu, Mikiko C Siomi, Haruhiko Siomi
    • Organizer
      2014 Keystone Symposia Conference - A9: RNA Silencing
    • Place of Presentation
      Sheraton Seattle Hotel, Seattle, Washington USA
    • Related Report
      2013 Annual Research Report
  • [Presentation] ショウジョウバエ卵巣におけるpiRNA生合成機構2013

    • Author(s)
      佐藤薫, 岩崎由香, 渋谷あおい, Piero Carninci, 石津弘嗣, 塩見美喜子, 塩見春彦
    • Organizer
      日本遺伝学会第85回大会
    • Place of Presentation
      慶應義塾大学日吉キャンパス・神奈川
    • Year and Date
      2013-09-19
    • Related Report
      2013 Final Research Report
  • [Presentation] Distinctive functions of Maelstrom in the piRNA pathway in the germline and ovarian somatic cells2013

    • Author(s)
      佐藤薫, 難波祐里香, 塩見美喜子, 塩見春彦
    • Organizer
      分子生物学会
    • Place of Presentation
      神戸ポートアイランド・神戸
    • Related Report
      2013 Final Research Report
  • [Presentation] ショウジョウバエ卵巣におけるpiRNA生合成機構2013

    • Author(s)
      Kaoru Sato, Yuka W Iwasaki, Aoi Shibuya, Piero Carninci, Hirotsugu Ishizu, Mikiko C Siomi, Haruhiko Siomi
    • Organizer
      日本遺伝学会第85回大会
    • Place of Presentation
      慶應義塾大学日吉キャンパス・神奈川県横浜市
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Distinctive functions of Maelstrom in the piRNA pathway in the germline and ovarian somatic cells2013

    • Author(s)
      Kaoru Sato, Namba Yurika, Haruhiko Siomi and Mikiko C Siomi
    • Organizer
      分子生物学会
    • Place of Presentation
      神戸ポートアイランド・兵庫県神戸市
    • Related Report
      2013 Annual Research Report
  • [Presentation] Functional analyses of Maelstrom in the piRNA pathway in Drosophila2012

    • Author(s)
      Kaoru Sato, Naoki Matsumoto, Hiroshi Nishimasu, Osamu Nureki, Haruhiko Siomi, Mikiko C Siomi
    • Organizer
      Seminars on Germline Stem Cell
    • Place of Presentation
      慶應義塾大学信濃町キャンパス・東京
    • Year and Date
      2012-07-17
    • Related Report
      2013 Final Research Report
  • [Presentation] Functional analyses of Maelstrom in the piRNA pathway in Drosophila2012

    • Author(s)
      Kaoru Sato, Naoki Matsumoto, Hiroshi Nishimasu, Osamu Nureki, Haruhiko Siomi, Mikiko C Siomi
    • Organizer
      CSHL meeting Regulatory & Non-Coding RNAs
    • Place of Presentation
      Cold Spring Harbor Laboratory, NY, USA
    • Related Report
      2013 Final Research Report
  • [Presentation] Functional analyses of Maelstrom in the piRNA pathway in Drosophila2012

    • Author(s)
      Kaoru Sato
    • Organizer
      CSHL meeting Regulatory & Non-Coding RNAs
    • Place of Presentation
      Cold Spring Harbor Laboratory (アメリカ)
    • Related Report
      2012 Research-status Report
  • [Presentation] Functional analyses of Maelstrom in the piRNA pathway in Drosophila

    • Author(s)
      Kaoru Sato
    • Organizer
      Seminars on Germline Stem Cell
    • Place of Presentation
      Keio university (東京)
    • Related Report
      2012 Research-status Report
    • Invited
  • [Remarks]

    • URL

      http://www-siomilab.biochem.s.u-tokyo.ac.jp/index.html

    • Related Report
      2013 Final Research Report
  • [Remarks] 東京大学理学部塩見研究室

    • URL

      http://www-siomilab.biochem.s.u-tokyo.ac.jp/index.html

    • Related Report
      2013 Annual Research Report
  • [Remarks] 研究室HP

    • URL

      http://www-siomilab.biochem.s.u-tokyo.ac.jp/index.html

    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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