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Analysis of the aberrant translational stall and its release during translation reaction.

Research Project

Project/Area Number 24750156
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Chemistry related to living body
Research InstitutionKonan University

Principal Investigator

TAKAHASHI Shuntaro  甲南大学, 先端生命工学研究所, 講師 (40456257)

Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2013: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Fiscal Year 2012: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords翻訳 / 翻訳終結 / 遺伝子 / リボソーム / 水晶発振子 / リアルタイム測定
Research Abstract

Genetic information on DNA is transcribed into mRNA and then translated into protein. Duding translation process, the rate of synthesis of protein was varied by various factors. Thus, it has been supposed that the translation reaction possibly stalls aberrantly and restarts from stalling. In this study, we established the methodology by using quart-rystal microbalance to monitor the aberrant translational stall and its release. As a result, we found that the frequency of translational stall depends on each sequence of genes. Moreover, we proposed a novel mechanism of translational stall and restart from the experimental results of translational restart from the artificially translational stall.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (20 results)

All 2014 2013 2012

All Journal Article (7 results) (of which Peer Reviewed: 6 results) Presentation (9 results) Book (4 results)

  • [Journal Article] Monitoring and Kinetic Analysis of the Molecular Interactions by Which a repress Protein, PhaR, Binds to Target DNAs and poly[R-3-hydrocybutyrate]2013

    • Author(s)
      M. Yamada, S. Takahashi, Y. Okahata, Y. Doi, and K. Numata
    • Journal Title

      AMB Express

      Volume: 3 Issue: 1 Pages: 1-7

    • DOI

      10.1186/2191-0855-3-6

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Direct monitoring of initiation factor dynamics through formation of 30S and 70S translation-initiation complexes on a quartz crystal microbalance2013

    • Author(s)
      S. Takahashi, H. Isobe, T. Ueda, and Y. Okahata
    • Journal Title

      Chem. Eur. J.

      Volume: 19 Pages: 6807-6816

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Direct monitoring of initiation factor dynamics through formation of 30S and 70S translation-initiation complexes on a quartz crystal microbalance2013

    • Author(s)
      Takahashi, S.
    • Journal Title

      Chemistry

      Volume: 19 Issue: 21 Pages: 6807-6816

    • DOI

      10.1002/chem.201203502

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Translation Enhancer Improves the Ribosome Liberation from Translation Initiation2013

    • Author(s)
      S. Takahashi, H. Furusawa, T. Ueda, and Y. Okahata
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 135 Issue: 35 Pages: 13096-13106

    • DOI

      10.1021/ja405967h

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Translation enhancer improves the ribosome liberation from translation initiation2012

    • Author(s)
      S. Takahashi, H. Furusawa, T. Ueda, and Y. Okahata
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 135 Pages: 13096-13106

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Traveling time of a translating ribosome along mRNA monitored directly on a quartz crystal microbalance2012

    • Author(s)
      S. Takahashi, K. Tsuji, T. Ueda, and Y. Okahata
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 134 Pages: 6793-6800

    • Related Report
      2013 Final Research Report
  • [Journal Article] Traveling Time of a Translating Ribosome along Messenger RNA Monitored Directly on a Quartz Crystal Microbalance2012

    • Author(s)
      Shuntaro Takahashi, Kentaro Tsuji, Takuya Ueda, Yoshio Okahata
    • Journal Title

      Journal of American Chemical Society

      Volume: (in press) Issue: 15 Pages: 6793-6800

    • DOI

      10.1021/ja300993d

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] 生命分子の挙動に及ぼす分子環境の効果(47)圧力変化によるi-motif DNAの構造安定性制御2014

    • Author(s)
      高橋俊太郎、杉本直己
    • Organizer
      日本化学会第94春季年会(2014)
    • Place of Presentation
      名古屋大学
    • Related Report
      2013 Final Research Report
  • [Presentation] 生命分子の挙動に及ぼす分子環境の効果 (47) 圧力変化による i-motif DNA の構造 安定性制御2014

    • Author(s)
      高橋俊太郎、杉本直己
    • Organizer
      日本化学会第94春季年会
    • Place of Presentation
      名古屋大学
    • Related Report
      2013 Annual Research Report
  • [Presentation] 擬似細胞環境下でのDNA四重鎖構造の熱安定性に対する圧力効果2013

    • Author(s)
      高橋俊太郎、杉本直己
    • Organizer
      第54回高圧討論会
    • Place of Presentation
      朱鷺メッセ
    • Related Report
      2013 Final Research Report
  • [Presentation] 翻訳終結因子が関与する遺伝子発現制御の解析2013

    • Author(s)
      高橋俊太郎、廣瀬敦、岡畑恵雄
    • Organizer
      日本化学会第93春季年会(2013)
    • Place of Presentation
      立命館大学
    • Related Report
      2013 Final Research Report
  • [Presentation] 擬似細胞環境下での DNA 四重鎖構造の熱安定性に対する圧力効果2013

    • Author(s)
      高橋俊太郎、杉本直己
    • Organizer
      第54回高圧討論会
    • Place of Presentation
      朱鷺メッセ
    • Related Report
      2013 Annual Research Report
  • [Presentation] 翻訳終結因子が関与する遺伝子発現制御の解析2013

    • Author(s)
      高橋俊太郎・廣瀬敦・岡畑恵雄
    • Organizer
      日本化学会第93春季年会(2013)
    • Place of Presentation
      立命館大学
    • Related Report
      2012 Research-status Report
  • [Presentation] The regulation mechanism of gene expression in translation termination2012

    • Author(s)
      Shuntaro Takahashi, Naoki Sugimoto, Yoshio Okahata
    • Organizer
      The First International Symposium on Biofunctional Chemistry (ISBC2012)
    • Place of Presentation
      東京工業大学
    • Related Report
      2013 Final Research Report 2012 Research-status Report
  • [Presentation] 合成途中のタンパク質が及ぼす翻訳終結速度への影響2012

    • Author(s)
      高橋俊太郎、杉本直己、岡畑恵雄
    • Organizer
      第6回バイオ関連シンポジウム
    • Place of Presentation
      北海道大学
    • Related Report
      2013 Final Research Report 2012 Research-status Report
  • [Presentation] mRNA配列に制御された翻訳終結反応の解析2012

    • Author(s)
      高橋俊太郎、上田卓也、岡畑惠雄
    • Organizer
      第14回RNAミーティング
    • Place of Presentation
      東北大学
    • Related Report
      2013 Final Research Report 2012 Research-status Report
  • [Book] バイオセンシングのための水晶発振子マイクロバランス法ー原理から応用例まで2013

    • Author(s)
      岡畑恵雄、森俊明、古澤宏幸、高橋俊太郎
    • Publisher
      講談社サイエンティフィク
    • Related Report
      2013 Final Research Report
  • [Book] バイオセンシングのための水晶発振子マイクロバランス法ー原理から応用例まで2013

    • Author(s)
      岡畑恵雄・森俊明・古澤宏幸・高橋俊太郎
    • Total Pages
      310
    • Publisher
      講談社サイエンティフィク
    • Related Report
      2012 Research-status Report
  • [Book] CSJカレントレビュー10ここまで進んだバイオセンシング・イメージング1分子から細胞、脳まで(日本化学会編)2012

    • Author(s)
      岡畑恵雄、高橋俊太郎
    • Publisher
      化学同人
    • Related Report
      2013 Final Research Report
  • [Book] CSJカレントレビュー10 ここまで進んだバイオセンシング・イメージング 1分子から細胞、脳まで2012

    • Author(s)
      岡畑恵雄・高橋俊太郎(日本化学会編)
    • Total Pages
      209
    • Publisher
      化学同人
    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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