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Establishment of the assigning method of terahertz spectra of organic molecules

Research Project

Project/Area Number 24760049
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Applied optics/Quantum optical engineering
Research InstitutionShizuoka University

Principal Investigator

KAMBARA Ohki  静岡大学, 電子工学研究所, 准教授 (90452490)

Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2014: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2013: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2012: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywordsテラヘルツ分光 / DFT / 周期境界条件 / アミノ酸 / ペプチド / 有機分子
Outline of Final Research Achievements

Experimentally obtained terahertz spectra were obtained for small organic molecules or some amino acids. To assign these spectra, DFT calculation under periodic boundary condition of these samples were performed at the same time. By comparing these results, it is found that both frequencies and their intensities of vibrational modes from theoretical calculation were in good agreement with actual measurements.
This assigning method were applied for some topics. The smoothing of terahertz spectra of peptides were caused by the increasing of bond length. In other case, the change of low-frequency modes with structural change in various chemical reactions were revealed. These model cases shows that the combined approach of theory and experiment are useful to discuss low-frequency modes of solid crystals.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (20 results)

All 2014 2013 2012 Other

All Journal Article (4 results) (of which Peer Reviewed: 4 results) Presentation (16 results) (of which Invited: 1 results)

  • [Journal Article] Terahertz spectroscopy and solid-state density functional theory calculation of anthracene: effect of dispersion force on the vibrational modes2014

    • Author(s)
      Feng Zhang, Michitoshi Hayashi, Houng-Wei Wang, Keisuke Tominaga, Ohki Kambara, Jun-ichi Nishizawa, Tetsuo Sasaki
    • Journal Title

      The Journal of Chemical Physics

      Volume: 140 Issue: 17 Pages: 174509-174509

    • DOI

      10.1063/1.4873421

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Analysis of vibrational spectra of solid-state adenine and adenosine in the terahertz region2014

    • Author(s)
      Feng Zhang, Ohki Kambara, Keisuke Tominaga, Jun-ichi Nishizawa, Tetsuo Sasaki, Houng-Wei Wang and Michitoshi Hayashi
    • Journal Title

      RSC Adv.

      Volume: 4 Issue: 1 Pages: 269-278

    • DOI

      10.1039/c3ra44285c

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Vibrational mode assignment in the terahertz frequency region by isotope shift: anthracene in solid state2013

    • Author(s)
      Ohki Kambara, Carlito S. Ponseca, Jr., Keisuke Tominaga, Jun-ichi Nishizawa, Tetsuo Sasaki, Houng-Wei Wang, and Michitoshi Hayashi
    • Journal Title

      Bulletin of the Chemical Society of Japan

      Volume: TBA Issue: 6 Pages: 714-720

    • DOI

      10.1246/bcsj.20120200

    • NAID

      10031176005

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Assessment of density functional theory to calculate the phase transition pressure of ice.2012

    • Author(s)
      Ohki Kambara, Kaito Takahashi, Michitoshi Hayashi and Jer-Lai Kuo
    • Journal Title

      Phys Chem Chem Phys.

      Volume: 14(32) Issue: 32 Pages: 11484-11490

    • DOI

      10.1039/c2cp41495c

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] テラヘルツ振動領域に表れる有機分子の水和の影響と DFTによる振動数解析2014

    • Author(s)
      神原 大, 廣本 宣久
    • Organizer
      24回日本赤外線学会研究発表会
    • Place of Presentation
      大阪府立大学(大阪府堺市)
    • Year and Date
      2014-11-27 – 2014-11-28
    • Related Report
      2014 Annual Research Report
  • [Presentation] DFTによるテラヘルツスペクトル帰属の現状2014

    • Author(s)
      神原 大
    • Organizer
      「テラヘルツ波科学技術と産業開拓第182委員会」 第22回委員会および研究会
    • Place of Presentation
      ホテルグランドヒル市ヶ谷(東京都新宿区)
    • Year and Date
      2014-10-31
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Effect of Hydration water on terahertz vibrational modes of small molecules2014

    • Author(s)
      Ohki Kambara, Norihisa Hiromoto
    • Organizer
      第52回日本生物物理学会年会
    • Place of Presentation
      札幌コンベンションセンター(北海道札幌市)
    • Year and Date
      2014-09-25 – 2014-09-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] 毛髪ケラチンを構成するアミノ酸の テラヘルツスペクトル測定2014

    • Author(s)
      柴 直孝, 山本 健, 神原 大, 廣本 宣久
    • Organizer
      第75回応用物理学会秋季学術講演会
    • Place of Presentation
      北海道大学札幌キャンパス(北海道札幌市)
    • Year and Date
      2014-09-17 – 2014-09-20
    • Related Report
      2014 Annual Research Report
  • [Presentation] Toward Precise Assignment Of THz Spectra By DFT2014

    • Author(s)
      Ohki Kambara
    • Organizer
      39th International Conference on Infrared, Millimeter, and Terahertz Waves (IRMMW-THz2014)
    • Place of Presentation
      University of Arizona (アメリカ)
    • Year and Date
      2014-09-14 – 2014-09-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] Polarization Terahertz Spectroscopy Application To Theophylline Anhydrite Single Crystal For Vibrational Mode Assignment2014

    • Author(s)
      Tetsuo Sasaki, Ohki Kambara, Tomoaki Sakamoto, Jun-ichi Nishizawa
    • Organizer
      39th International Conference on Infrared, Millimeter, and Terahertz Waves (IRMMW-THz2014)
    • Place of Presentation
      University of Arizona (アメリカ)
    • Year and Date
      2014-09-14 – 2014-09-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] Practical application of DFT to assign THz spectra2014

    • Author(s)
      Ohki Kambara
    • Organizer
      International symposium on Frontier of Terahertz Science
    • Place of Presentation
      沖縄科学技術大学院大学(OIST)(沖縄県恩納村)
    • Year and Date
      2014-08-04 – 2014-08-06
    • Related Report
      2014 Annual Research Report
  • [Presentation] Temperature dependence of terahertz spectrum of amino acids2013

    • Author(s)
      Ohki Kambara, Tetsuo Sasaki, Jun-ichi Nishizawa
    • Organizer
      IInternational Conference on Advanced Vibrational Spectroscopy (ICAVS) 7
    • Place of Presentation
      Kobe Convention Center (神戸市)
    • Related Report
      2013 Research-status Report
  • [Presentation] Polarization Terahertz Spectroscopy of Organic Single Crystals Grown by Temperature Difference Method2013

    • Author(s)
      Tetsuo Sasaki, Hiroko Kimura, Ohki Kambara, Tomoaki Sakamoto, Jun-ichi Nishizawa
    • Organizer
      IInternational Conference on Advanced Vibrational Spectroscopy (ICAVS) 7
    • Place of Presentation
      Kobe Convention Center (神戸市)
    • Related Report
      2013 Research-status Report
  • [Presentation] Structural hierarchy of short peptides observed in the terahertz frequency region2013

    • Author(s)
      Ohki Kambara, Tetsuo Sasaki, Jun-ichi Nishizawa
    • Organizer
      IRMMW-THz 2013
    • Place of Presentation
      Congress Center Mainz (ドイツ)
    • Related Report
      2013 Research-status Report
  • [Presentation] DFT approach for the assignment of low-frequency vibrational modes of amino acids and peptides in the terahertz frequency region.2013

    • Author(s)
      Ohki Kambara
    • Organizer
      第51回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館 (京都市)
    • Related Report
      2013 Research-status Report
  • [Presentation] 単結晶偏光分光測定を用いた医薬品のテラヘルツ帯分子振動解析2013

    • Author(s)
      佐々木哲朗, 坂本知昭, 木村寛子, 神原 大
    • Organizer
      赤外線学会
    • Place of Presentation
      防衛大学校 (横須賀市)
    • Related Report
      2013 Research-status Report
  • [Presentation] テラヘルツ分光吸収スペクトル測定のための有機分子単結晶作成2013

    • Author(s)
      佐々木哲朗, 木村寛子, 神原 大
    • Organizer
      第43回結晶成長国内会議(NCCG-43)
    • Place of Presentation
      長野市生涯学習センター (長野市)
    • Related Report
      2013 Research-status Report
  • [Presentation] Assignment of low-frequency vibrational modes of coumarin-3-carboxylic acid2012

    • Author(s)
      Ohki Kambara, Tetsuo Sasaki, Keisuke Tominaga, Jun-ichi Nishizawa
    • Organizer
      IRMMW-THz 2012
    • Place of Presentation
      University of Wollongong (Australia)
    • Related Report
      2012 Research-status Report
  • [Presentation] Low-frequency spectra of coumarin-3-caboxylic acid. From mode assignment to photoreaction.2012

    • Author(s)
      Ohki Kambara, Tetsuo Sasaki, Keisuke Tominaga, Jun-ichi Nishizawa
    • Organizer
      International Symposium on Frontiers in THz Technology 2012
    • Place of Presentation
      Todaiji Culture Center (Nara)
    • Related Report
      2012 Research-status Report
  • [Presentation] テラヘルツスペクトルから見たタンパク質の構造階層性

    • Author(s)
      神原 大
    • Organizer
      日本分光学会中部支部講演会 ~テラヘルツ分光の現状と将来展望~
    • Place of Presentation
      静岡大学浜松キャンパス (浜松市)
    • Related Report
      2013 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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