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Transcriptome analysis and laser manipulation for plant axis formation

Research Project

Project/Area Number 24770045
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Plant molecular biology/Plant physiology
Research InstitutionNagoya University (2013-2014)
Nara Institute of Science and Technology (2012)

Principal Investigator

MINAKO Ueda  名古屋大学, 理学研究科(WPI), 講師 (20598726)

Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2013: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2012: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Keywords植物発生 / 転写因子 / 体軸形成 / パターン形成 / 植物胚 / 国際情報交換
Outline of Final Research Achievements

We screened the downstream candidates of a specific transcription factor, which regulates the polarization of the zygote and the axis formation of the early embryo in a model plant, Arabidopsis. Based on the transcriptome analysis using next generation sequence, we identified 27 candidates, including various factors, such as the putative regulator for the organelle structure or for the transport of a major plant hormone. We analyzed the mutants of these genes, and found that several lines are defective in embryo morphology and are embryo lethal in single or multiple mutants.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (16 results)

All 2015 2014 2013 2012 Other

All Journal Article (3 results) (of which Peer Reviewed: 1 results) Presentation (13 results)

  • [Journal Article] ATM-mediated phosphorylation of SOG1 is essential for the DNA damage response in Arabidopsis.2013

    • Author(s)
      Yoshiyama Okamoto K, Kobayashi J, Ogita N, Ueda M, Kimura S, Maki H, Umeda M
    • Journal Title

      EMBO Reports

      Volume: 14 Issue: 9 Pages: 817-822

    • DOI

      10.1038/embor.2013.112

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Axis formation of <I>Arabidopsis</I> embryos: Link of zygotic polarity and embryo patterning2012

    • Author(s)
      植田美那子
    • Journal Title

      PLANT MORPHOLOGY

      Volume: 24 Issue: 1 Pages: 89-96

    • DOI

      10.5685/plmorphol.24.89

    • NAID

      130004726675

    • ISSN
      0918-9726, 1884-4154
    • Related Report
      2012 Research-status Report
  • [Journal Article] The origin of the plant body axis2012

    • Author(s)
      Minako Ueda, Thomas Laux
    • Journal Title

      Current Opinion in Plant Biology

      Volume: 15 Issue: 6 Pages: 578-84

    • DOI

      10.1016/j.pbi.2012.08.001

    • Related Report
      2012 Research-status Report
  • [Presentation] シロイヌナズナの受精卵極性と初期胚パターンの制御機構2015

    • Author(s)
      植田美那子, 木全祐資, 栗原大輔, 東山哲也
    • Organizer
      日本植物生理学会
    • Place of Presentation
      東京
    • Year and Date
      2015-03-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] Molecular dynamics of plant axis formation2015

    • Author(s)
      Minako Ueda, Yusuke Kimata, Daisuke Kurihara, Tetsuya Higashiyama
    • Organizer
      The 1st CSRS-ITbM Joint Workshop
    • Place of Presentation
      愛知
    • Year and Date
      2015-01-07
    • Related Report
      2014 Annual Research Report
  • [Presentation] Transcriptional network underlying the apical-basal axis formation in plant embryos2014

    • Author(s)
      Minako Ueda, Tetsuya Higashiyama
    • Organizer
      The 38th Naito Conference
    • Place of Presentation
      北海道
    • Year and Date
      2014-10-08
    • Related Report
      2014 Annual Research Report
  • [Presentation] シロイヌナズナ受精卵における細胞極性化過程のライブイメージング2014

    • Author(s)
      植田美那子,木全祐資,栗原大輔, 東山哲也
    • Organizer
      エンドメンブレンミーティングプログラム
    • Place of Presentation
      神奈川
    • Year and Date
      2014-09-12
    • Related Report
      2014 Annual Research Report
  • [Presentation] シロイヌナズナの受精卵極性とパターン形成の制御機構2014

    • Author(s)
      植田美那子,木全祐資,東山哲也
    • Organizer
      日本植物学会
    • Place of Presentation
      神奈川
    • Year and Date
      2014-09-11
    • Related Report
      2014 Annual Research Report
  • [Presentation] Molecular dynamics of plant axis formation2014

    • Author(s)
      Integration of paternal and maternal factors directly regulates transcription of Arabidopsis embryo patterning gene WOX8
    • Organizer
      International ERATO Higashiyama Live-Holonics Symposium 2014
    • Place of Presentation
      愛知
    • Year and Date
      2014-09-09
    • Related Report
      2014 Annual Research Report
  • [Presentation] Integration of paternal and maternal factors directly regulates transcription of Arabidopsis embryo patterning gene WOX82014

    • Author(s)
      Minako Ueda, Zhongjuan Zhang, Ernst Aichinger, Tetsuya Higashiyama, Masaaki Umeda, Edwin Groot and Thomas Laux
    • Organizer
      名古屋大学・フライブルグ大学共催ミニシンポジウム
    • Place of Presentation
      ドイツ
    • Year and Date
      2014-06-17
    • Related Report
      2014 Annual Research Report
  • [Presentation] Molecular Regulation of Plant Axis Formation2014

    • Author(s)
      Minako Ueda, Yuusuke Kimata, Ayato Sato, Tetsuya Higashiyama
    • Organizer
      Molecular Regulation of Plant Axis Formation
    • Place of Presentation
      愛知
    • Year and Date
      2014-05-12
    • Related Report
      2014 Annual Research Report
  • [Presentation] シロイヌナズナの受精卵極性と体軸形成の制御機構2013

    • Author(s)
      植田美那子、東山哲也、梅田正明
    • Organizer
      第25回日本植物形態学会
    • Place of Presentation
      北海道
    • Related Report
      2013 Research-status Report
  • [Presentation] シロイヌナズナの受精卵極性と体軸形成の制御機構2013

    • Author(s)
      植田美那子、東山哲也、梅田正明
    • Organizer
      第77回日本植物学会
    • Place of Presentation
      北海道
    • Related Report
      2013 Research-status Report
  • [Presentation] 植物受精卵における発生軸の確立:受精直後から始まる転写因子ネットワークの役割

    • Author(s)
      植田美那子
    • Organizer
      第5回生殖研究若手の会
    • Place of Presentation
      東京大学三崎臨海実験所
    • Related Report
      2012 Research-status Report
  • [Presentation] Transcriptional network for Arabidopsis zygote polarization

    • Author(s)
      Minako Ueda
    • Organizer
      A New Generation of Plant Embryo Research
    • Place of Presentation
      奈良先端科学技術大学院大学
    • Related Report
      2012 Research-status Report
  • [Presentation] Live-imaging of spatiotemporal regulation of cell division by the double labeling of M- and S-phase progression

    • Author(s)
      Minako Ueda
    • Organizer
      第54回日本植物生理学会大会
    • Place of Presentation
      岡山大学
    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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