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Multiscale motion analysis of membrane proteins at neuromuscular junction

Research Project

Project/Area Number 24770147
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Biophysics
Research InstitutionJapan Synchrotron Radiation Research Institute

Principal Investigator

SEKIGUCHI Hiroshi  公益財団法人高輝度光科学研究センター, 利用研究促進部門, 研究員 (00401563)

Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2013: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2012: ¥2,860,000 (Direct Cost: ¥2,200,000、Indirect Cost: ¥660,000)
Keywords1分子計測 / ナノ結晶 / 分子内運動 / 構造変化 / 揺らぎ / 1分子計測 / ダイナミクス計測 / 膜タンパク質
Research Abstract

In this project, we engaged in developing the experimental technique to track internal motion and translational motion of membrane proteins at multi-time scale based on diffracted X-ray tracking method (DXT). In DXT, the internal motion of an individual single protein is monitored through the trajectory of the Laue spot from the nanocrystal labeled on the objective protein immobilized on the substrate surface. We improved a quality of the gold nanocrystal and optimized the experimental system to monitor ligand-induced motion of membrane protein, acetylcholine receptors, at several 10 micro seconds scale. Moreover, we examined a quantum dot as a DXT probe, that could be suited to track internal motion (DXT) and translational motion (fluorescence microscope) of membrane proteins.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (23 results)

All 2014 2013 2012 Other

All Journal Article (3 results) (of which Peer Reviewed: 1 results) Presentation (17 results) (of which Invited: 2 results) Remarks (3 results)

  • [Journal Article] X線回折動画からのタンパク質1分子内部動態計測2014

    • Author(s)
      佐々木裕次, 一柳光平, 関口博史
    • Journal Title

      PF News

      Volume: Vol. 31 No.4 Pages: 15-21

    • Related Report
      2013 Final Research Report
  • [Journal Article] X線回折動画からのタンパク質1分子内部動態計測2014

    • Author(s)
      佐々木裕次、一柳光平、関口博史
    • Journal Title

      PF News

      Volume: 31 Pages: 15-21

    • Related Report
      2013 Annual Research Report
  • [Journal Article] ATP dependent rotational motion of group II chaperonin observed by X-ray single molecule tracking2013

    • Author(s)
      H. Sekiguchi, A. Nakagawa, K. Moriya, K. Makabe, K. Ichiyanagi, S. Nozawa, T. Sato, S. Adachi, K. Kuwajima, M. Yohda and Y. C. Sasaki
    • Journal Title

      PLoS ONE

      Volume: 8

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Presentation] Single Molecule Motion Maps of Open and Desensitization States of Nicotinic Acetylcholine Receptors2014

    • Author(s)
      H. Sekiguchi, M. Tokue, Y. Nishino, K. Ichiyanagi, N. Yagi, A. Miyazawa, T. Kubo, Y. C. Sasaki
    • Organizer
      58th Annual Meeting of Biophysical Society
    • Place of Presentation
      Moscone Center, San Francisco, USA
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] X線1分子追跡法から見えてきたタンパク質1分子内運動2014

    • Author(s)
      関口博史
    • Organizer
      第82回LSJセミナー
    • Place of Presentation
      Stanford University, USA
    • Related Report
      2013 Annual Research Report
  • [Presentation] 高速X線1分子追跡法による複合体タンパク質・ダイナミクス計測2013

    • Author(s)
      関口博史
    • Organizer
      京都府立大学生命物理化学セミナー「蛋白質の動的挙動解明に向けた革新的分析手法」
    • Place of Presentation
      キャンパスプラザ京都第一会議室,京都市
    • Year and Date
      2013-11-03
    • Related Report
      2013 Final Research Report
  • [Presentation] Cooperative Motion of a Multi-subunit Protein Visualized by X-ray Single Molecule Tracking2013

    • Author(s)
      H. Sekiguchi, Y. Yamamoto, A. Nakagawa, K. Moriya, M. Arita, K. Ichiyanagi, M. Yohda, N. Yagi and Y. C. Sasaki
    • Organizer
      57th Annual Meeting of Biophysical Society
    • Place of Presentation
      Pennsylvania Convention Center, Philadelphia, PA, USA
    • Related Report
      2013 Final Research Report
  • [Presentation] 3D Micro-second X-ray Single Molecule Tracking of Nicotinic Acetylcholine Receptor with Picometer Accuracy2013

    • Author(s)
      M. Tokue, K .Hoshisashi, H. Sekiguchi, N. Yagi, K. Ichiyanagi, Y. Nishino, A. Miyazawa, T. Kubo, Y. C. Sasaki
    • Organizer
      57th Annual Meeting of Biophysical Society
    • Place of Presentation
      Pennsylvania Convention Center, Philadelphia, PA, USA
    • Related Report
      2013 Final Research Report
  • [Presentation] タンパク質複合体・協同的運動の1分子解析2013

    • Author(s)
      関口博史, 山本陽平, 有田真優乃, 一柳光平, 野澤俊介, 佐藤篤志, 足立伸一, 養王田正文, 八木直人, 佐々木裕次
    • Organizer
      第26回放射光学会年会
    • Place of Presentation
      名古屋大学
    • Related Report
      2013 Final Research Report
  • [Presentation] Cooperative Motion Analysis of group II chaperonin by X-ray Single Molecule Tracking2013

    • Author(s)
      関口博史、山本陽平、有田真優乃、石黒直樹、一柳光平、養王田正文、八木直人、佐々木裕次
    • Organizer
      第51回日本生物物理学会
    • Place of Presentation
      京都国際会議場
    • Related Report
      2013 Annual Research Report
  • [Presentation] タンパク質複合体・協同的運動の1分子解析2013

    • Author(s)
      関口博史
    • Organizer
      第26回放射光学会年会
    • Place of Presentation
      名古屋大学
    • Related Report
      2012 Research-status Report
  • [Presentation] 3D Micro-second X-ray Single Molecule Tracking of Nicotinic Acetylcholine Receptor with Picometer Accuracy2013

    • Author(s)
      H. Sekiguchi (M. Tokue)
    • Organizer
      57th Annual Meeting of Biophysical Society
    • Place of Presentation
      Philadelphia
    • Related Report
      2012 Research-status Report
  • [Presentation] Cooperative Motion of a Multi-subunit Protein Visualized by X-ray Single Molecule Tracking2013

    • Author(s)
      H. Sekiguchi
    • Organizer
      57th Annual Meeting of Biophysical Society
    • Place of Presentation
      Philadelphia
    • Related Report
      2012 Research-status Report
  • [Presentation] 複合体タンパク質・分子内運動の高速1分子計測2012

    • Author(s)
      関口博史, 山本陽平, 有田真優乃, 西野有里, 宮澤淳夫, 養王田正文, 八木直人, 佐々木裕次
    • Organizer
      新学術領域「揺らぎと生体機能」「水和とATP」合同公開シンポジウム「ゆらぎと水−生命のエネルギーと機能の分子機構を探る」
    • Place of Presentation
      大阪ガーデンパレス
    • Related Report
      2013 Final Research Report
  • [Presentation] Cooperativity analysis of multi-subunit proteins by 3D X-ray single molecule tracking2012

    • Author(s)
      H. Sekiguchi, Y. Yamamoto, M. Ariga, Y. Nishino, K. Ichiyanagi, N. Yagi, A. Miyazawa, M. Yohda, Y. C. Sasaki
    • Organizer
      International workshop on 3D atomic imaging at nano-scale active sites in materials (3D-AINAS 2012)
    • Place of Presentation
      Media hall in Kashiwa library, University of Tokyo, Chiba, JAPAN
    • Related Report
      2013 Final Research Report
  • [Presentation] グループII 型シャペロニンの1 分子内ダイナミクス計測2012

    • Author(s)
      関口博史
    • Organizer
      第12回日本蛋白質科学会年会
    • Place of Presentation
      名古屋国際会議場
    • Related Report
      2012 Research-status Report
  • [Presentation] Cooperative Motion Analysis of group II chaperonin at Single-molecule Level using Diffracted X-ray Tracking2012

    • Author(s)
      関口博史
    • Organizer
      第50回日本生物物理学会年会
    • Place of Presentation
      名古屋大学
    • Related Report
      2012 Research-status Report
  • [Presentation] Cooperativity analysis of multi-subunit proteins by 3D X-ray single molecule tracking2012

    • Author(s)
      関口博史
    • Organizer
      International workshop on 3D atomic imaging at nano-scale active sites in materials
    • Place of Presentation
      東京大学柏メディアホール
    • Related Report
      2012 Research-status Report
  • [Presentation] シャペロニンタンパク質分子の1分子ダイナミクス機能計測

    • Author(s)
      関口博史
    • Organizer
      第1回東大新領域・KEK連携教育シンポジウム
    • Place of Presentation
      高エネルギー加速器研究機構
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] 高速X線1分子追跡法による複合体タンパク質・ダイナミクス計測

    • Author(s)
      関口博史
    • Organizer
      京都府立大学生命物理化学セミナー
    • Place of Presentation
      キャンパスプラザ京都
    • Related Report
      2012 Research-status Report
    • Invited
  • [Remarks]

    • URL

      http://researchmap.jp/hisekiguchi/

    • Related Report
      2013 Final Research Report
  • [Remarks] 3D-AINAS 2012, Best Poster Awards, H. Sekiguchi"Cooperativity analysis of multi-subunit proteins by 3D X-ray single molecule tracking"

    • Related Report
      2013 Final Research Report
  • [Remarks] 関口博史 researchmap

    • URL

      http://researchmap.jp/hisekiguchi/

    • Related Report
      2013 Annual Research Report

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Published: 2013-05-31   Modified: 2019-07-29  

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