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Characterization of novel regulatory mechanism for the catabolic genes of aromatic compound degradation

Research Project

Project/Area Number 24780068
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Applied microbiology
Research InstitutionNagaoka University of Technology

Principal Investigator

KASAI DAISUKE  長岡技術科学大学, 工学部, 助教 (80452085)

Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2013: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2012: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywordsビフェニル代謝系 / 二成分制御系 / IclR型転写制御因子 / 2,6-ジヒドロキシ安息香酸 / ビフェニル
Research Abstract

In order to identify the regulatory mechanism for the transcription of biphenyl (BP) catabolic pathway genes in Rhodococcus jostii RHA1, an IclR-type transcriptional regulator gene, tsdR, whose transcription is controlled by two-component regulatory system of BP catabolism, was characterized. The results of the transcriptome analysis of tsdR deletion mutant grown with or without BP suggesting that the TsdR-regulated genes are involved in the BP catabolism. Electrophoretic mobility shift assays using purified TsdR and the promoter regions of 2,6-dihydroxybenzaote (26DHB) catabolic genes containing tsdB and tsdT revealed that the TsdR binds to the tsd promoter regions and the bindings are inhibited by the addition of 26DHB. These results indicate that TsdR acts as a repressor for the transcription of tsd genes and 26DHB interacts with TsdR as an effector molecule.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (15 results)

All 2013 2012

All Presentation (15 results)

  • [Presentation] Rhodococcus jostii RHA1株の2,6-ジヒドロキシ安息香酸代謝酵素遺伝子群の転写制御機構2013

    • Author(s)
      吉川翔太、笠井大輔、荒木直人、政井英司、福田雅夫
    • Organizer
      第65回生物工学会大会
    • Place of Presentation
      広島
    • Year and Date
      2013-09-19
    • Related Report
      2013 Final Research Report
  • [Presentation] Rhodococcus jostii RHA1株のγ-レゾルシン酸代謝酵素遺伝子群の転写制御機構の解明2013

    • Author(s)
      吉川翔太、笠井大輔、荒木直人、政井英司、福田雅夫
    • Organizer
      環境バイオテクノロジー学会2013年度大会
    • Place of Presentation
      小倉
    • Year and Date
      2013-05-31
    • Related Report
      2013 Final Research Report
  • [Presentation] Rhodococcus jostii RHA1株の硝酸と亜硝酸の利用システムの解明2013

    • Author(s)
      飯野藤樹、王勇、宮内啓介、笠井大輔、政井英司、藤井毅、小川直人、福田雅夫
    • Organizer
      環境バイオテクノロジー学会2013年度大会
    • Place of Presentation
      小倉
    • Year and Date
      2013-05-31
    • Related Report
      2013 Final Research Report
  • [Presentation] Rhodococcus jostii RHA1株のγ-レゾルシン酸代謝酵素遺伝子群の転写制御機構の解明2013

    • Author(s)
      吉川 翔太、笠井 大輔、荒木 直人、政井 英司、福田 雅夫
    • Organizer
      環境バイオテクノロジー学会
    • Place of Presentation
      小倉
    • Related Report
      2013 Annual Research Report
  • [Presentation] Rhodococcus jostii RHA1株の硝酸と亜硝酸の利用システムの解明2013

    • Author(s)
      飯野藤樹、王勇、宮内啓介、笠井大輔、政井英司、藤井毅、小川直人、福田雅夫
    • Organizer
      環境バイオテクノロジー学会
    • Place of Presentation
      小倉
    • Related Report
      2013 Annual Research Report
  • [Presentation] Rhodococcus jostii RHA1株の2,6-ジヒドロキシ安息香酸代謝酵素遺伝子群の転写制御機構2013

    • Author(s)
      吉川 翔太、笠井 大輔、荒木 直人、政井 英司、福田 雅夫
    • Organizer
      生物工学会大会
    • Place of Presentation
      広島
    • Related Report
      2013 Annual Research Report
  • [Presentation] Rhodococcus jostii RHA1の二成分制御系BphSTによる転写誘導機構の解明2012

    • Author(s)
      下平潤、宮沢雄太、岸田康平、笠井大輔、宮内啓介、政井英司、福田雅夫
    • Organizer
      日本農芸化学会関東支部会2012年度大会
    • Place of Presentation
      新潟
    • Year and Date
      2012-10-28
    • Related Report
      2013 Final Research Report
  • [Presentation] Rhodococcus jostii RHA1株の2,6-ジヒドロキシ安息香酸代謝酵素遺伝子群の単離と機能解析2012

    • Author(s)
      笠井大輔、荒木直人、飯野藤樹、本井広太、政井英司、福田雅夫
    • Organizer
      日本農芸化学会関東支部会2012年度大会
    • Place of Presentation
      新潟
    • Year and Date
      2012-10-28
    • Related Report
      2013 Final Research Report
  • [Presentation] Rhodococcus jostii RHA1株におけるスチレン分解機構の解明2012

    • Author(s)
      古澤裕樹、星あゆみ、田中良典、宮澤大輔、下平潤、笠井大輔、政井英司、福田雅夫
    • Organizer
      日本農芸化学会関東支部会2012年度大会
    • Place of Presentation
      新潟
    • Year and Date
      2012-10-27
    • Related Report
      2013 Final Research Report
  • [Presentation] Rhodococcus jostii RHA1株の2,6-ジヒドロキシ安息香酸代謝酵素遺伝子群の解析2012

    • Author(s)
      本井広太、笠井大輔、荒木直人、政井英司、福田雅夫
    • Organizer
      生物工学会2012年度大会
    • Place of Presentation
      神戸
    • Year and Date
      2012-10-24
    • Related Report
      2013 Final Research Report
  • [Presentation] γ-Resorcylate catabolic enzyme system in Rhodococcus jostii RHA12012

    • Author(s)
      笠井大輔、本井広太、荒木直人、政井英司、福田雅夫
    • Organizer
      15^<th> International Biotechnology Symposium and Exhibition
    • Place of Presentation
      韓国・デグ
    • Year and Date
      2012-09-18
    • Related Report
      2013 Final Research Report
  • [Presentation] Rhodococcus jostii RHA1のBphST二成分制御系による転写誘導メカニズムの解明2012

    • Author(s)
      下平潤、岸田康平、宮沢雄太、宮内啓介、笠井大輔、政井英司、福田雅夫
    • Organizer
      環境バイオテクノロジー学会2012年度大会
    • Place of Presentation
      京都
    • Year and Date
      2012-06-25
    • Related Report
      2013 Final Research Report
  • [Presentation] Rhodococcus jostii RHA1株の2,6-ジヒドロキシ安息香酸代謝酵素遺伝子群の単離と機能解析2012

    • Author(s)
      笠井大輔、荒木直人、飯野藤樹、本井広太、政井英司、福田雅夫
    • Organizer
      日本農芸化学会関東支部会
    • Place of Presentation
      新潟
    • Related Report
      2012 Research-status Report
  • [Presentation] Rhodococcus jostii RHA1株の2,6-ジヒドロキシ安息香酸代謝酵素遺伝子群の解析2012

    • Author(s)
      本井広太、笠井大輔、荒木直人、政井英司、福田雅夫
    • Organizer
      生物工学会
    • Place of Presentation
      神戸
    • Related Report
      2012 Research-status Report
  • [Presentation] γ-Resorcylate catabolic enzyme system in Rhodococcus jostii RHA12012

    • Author(s)
      笠井大輔、本井広太、荒木直人、政井英司、福田雅夫
    • Organizer
      International Biotechnology Symposium and Exhibition
    • Place of Presentation
      韓国・デグ
    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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