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Molecular mechanisms of the formation and the dissociation of the cytochrome c-cardiolipin complex

Research Project

Project/Area Number 24780112
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Bioproduction chemistry/Bioorganic chemistry
Research InstitutionKyoto University

Principal Investigator

ABE Masato  京都大学, (連合)農学研究科(研究院), 助教 (30543425)

Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2013: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Fiscal Year 2012: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywordsカルジオリピン / シトクロムc / ミトコンドリア / アポトーシス / リン脂質 / シトクロムC / シトクロムc / リポソーム
Research Abstract

Cardiolipin (CL) is a unique phospholipid in mitochondrial membranes with diverse biological functions. Induction of the peroxidase activity of cyt c by CL binding in the presence of hydrogen peroxide has been thought to be a key event in early apoptosis stage.
We synthesized a series of oxidized CLs in which four acyl chains were oxidized in different patterns. All oxidized CLs elicited strong inducing ability of the peroxidase activity of cyt c. A difference in the oxidized position including the number of OH group did not affect the inducing ability. Our results do not support a currently accepted notion that hydrophobic interaction between the acyl chains of CL and cyt c is critical for the formation of specific CL-cyt c complex and consequent induction of the peroxide activity.
Moreover, we synthesized some photoreactive CLs. By photoaffinity labeling experiments, the labeled peptide was detected by attaching a biotin to the incorporated ethynyl group by click chemistry.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (26 results)

All 2014 2013 2012 Other

All Journal Article (8 results) (of which Peer Reviewed: 8 results,  Open Access: 1 results) Presentation (15 results) Remarks (3 results)

  • [Journal Article] Design and Synthesis of Conformationally Constrained Analogues of cis-Cinnamic Acid and Evaluation of Their Plant Growth Inhibitory Activity2013

    • Author(s)
      Keisuke Nishikawa, Hiroshi Fukuda, Masato Abe, Kazunari Nakanishi, Yuta Tazawa, Chihiro Yamaguchi, Syuntaro Hiradate, Yoshiharu Fujii, Katsuhiro Okuda, Mitsuru Shindo
    • Journal Title

      Phytochemistry

      Volume: 96 Pages: 223-234

    • DOI

      10.1016/j.phytochem.2013.10.001

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Antimycin A-like molecules inhibit cyclic electron transport around photosystem I in ruptured chloroplasts2013

    • Author(s)
      Taira Y., Okegawa Y., Sugimoto K., Abe M., Miyoshi H. and Shikanai T
    • Journal Title

      FEBS Open Bio.

      Volume: 3 Issue: 1 Pages: 406-410

    • DOI

      10.1016/j.fob.2013.09.007

    • Related Report
      2013 Final Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Critical role of a methyl group on theγ-lactone ring of annonaceous acetogenins in the potent inhibition of mitochondrial complex I2013

    • Author(s)
      Naoto Kojima, Masato Abe, Yuki Suga, Kazufumi Ohtsuki, Tetsuaki Tanaka, Hiroki Iwasaki, Masayuki Yamashita, Hideto Miyoshi
    • Journal Title

      Bioorganic & Medicinal Chemistry Letters

      Volume: 23 Issue: 5 Pages: 1217-1219

    • DOI

      10.1016/j.bmcl.2013.01.018

    • Related Report
      2013 Annual Research Report 2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Substituent effects of cis-cinnamic acid analogues as plant growh inhibitors2013

    • Author(s)
      Keisuke Nishikawa, Hiroshi Fukuda, Masato Abe, Kazunari Nakanishi, Tomoya Taniguchi, Takashi Nomura, Chihiro Yamaguchi, Syuntaro Hiradate, Yoshiharu Fujii, Katsuhiro Okuda, Mitsuru Shindo
    • Journal Title

      Phytochemistry

      Volume: 96 Pages: 132-147

    • DOI

      10.1016/j.phytochem.2013.08.013

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular design, synthesis, and evaluation of novel potent apoptosis inhibitors inspired from bongkrekic acid2012

    • Author(s)
      Okuda, K., Hasui, K., Abe, M., Matsumoto, K., Shindo, M.
    • Journal Title

      Chem. Res. Toxic.

      Volume: 25 Pages: 2253-2260

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Key structural features of cis-cinnamic acid as an allelochemical2012

    • Author(s)
      Abe, M., Nishikawa, K., Fukuda, H., Nakanishi, K., Tazawa, Y., Taniguchi, T., Park, K., Hiradate, S., Fujii, Y., Okuda, K., Shindo, M.
    • Journal Title

      Phytochemistry

      Volume: 84 Pages: 56-67

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Molecular design, synthesis, and evaluation of novel potent apoptosis inhibitors inspired from bongkrekic acid2012

    • Author(s)
      Okuda, K., Hasui, K., Abe, M., Matsumoto, K., Shindo, M
    • Journal Title

      Chem. Res. Toxicol

      Volume: 25 Issue: 10 Pages: 2253-2260

    • DOI

      10.1021/tx300315h

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Key Structural Features of cis-Cinnamic Acid as an Allelochemical2012

    • Author(s)
      Masato Abe, Keisuke Nishikawa, Hiroshi Fukuda, Kazunari Nakanishi, Yuta Tazawa, Tomoya Taniguchi, So-young Park, Syuntaro Hiradate, Yoshiharu Fujii, Katsuhiro Okuda, Mitsuru Shindo
    • Journal Title

      Phytochemistry

      Volume: 84 Pages: 56-67

    • DOI

      10.1016/j.phytochem.2012.08.001

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] シトクロムc-カルジオリピン複合体のペルオキシダーゼ活性誘導の分子機構2014

    • Author(s)
      三木裕子、安部真人、三芳秀人
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      明治大学
    • Year and Date
      2014-03-29
    • Related Report
      2013 Final Research Report
  • [Presentation] リン脂質カルジオリピンのシトクロムcに対する結合部位の同定2014

    • Author(s)
      小坂亜弓、田邊有貴恵、安部真人、三芳秀人
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      明治大学
    • Year and Date
      2014-03-29
    • Related Report
      2013 Final Research Report
  • [Presentation] リン脂質カルジオリピンのシトクロムcへの結合部位の同定2014

    • Author(s)
      小坂亜弓、田邊有貴恵、安部真人、三芳秀人
    • Organizer
      日本農薬学会第39会大会
    • Place of Presentation
      京都大学
    • Year and Date
      2014-03-14
    • Related Report
      2013 Final Research Report
  • [Presentation] カルジオリピン-シトクロムc複合体のペルオキシダーゼ誘導の分子機構2014

    • Author(s)
      三木裕子、安部真人、三芳秀人
    • Organizer
      日本農薬学会第39会大会
    • Place of Presentation
      京都大学
    • Year and Date
      2014-03-14
    • Related Report
      2013 Final Research Report
  • [Presentation] リン脂質カルジオリピンのシトクロムcへの結合部位の同定2014

    • Author(s)
      小坂亜弓、田邊有紀貴恵、安部真人、三芳秀人
    • Organizer
      日本農薬学会第39回大会
    • Place of Presentation
      京都大学農学部
    • Related Report
      2013 Annual Research Report
  • [Presentation] カルジオリピン-シトクロムc複合体のペルオキシダーゼ誘導の分子機構2014

    • Author(s)
      三木裕子、安部真人、三芳秀人
    • Organizer
      日本農薬学会第39回大会
    • Place of Presentation
      京都大学農学部
    • Related Report
      2013 Annual Research Report
  • [Presentation] リン脂質カルジオリピンのシトクロムcに対する結合部位の同定2014

    • Author(s)
      小坂亜弓、田邊有貴恵、安部真人、三芳秀人
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      明治大学農学部
    • Related Report
      2013 Annual Research Report
  • [Presentation] シトクロムc-カルジオリピン複合体のペルオキシダーゼ活性誘導の分子機構2014

    • Author(s)
      三木裕子、安部真人、三芳秀人
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      明治大学農学部
    • Related Report
      2013 Annual Research Report
  • [Presentation] Synthesis and characterization of photoaffinity probes of cardiolipin as a key player of the induction of peroxidase activity of cytochrome c2013

    • Author(s)
      Abe, M., Kosaka, A., Nakano, M., Miyoshi, H.
    • Organizer
      Gordon Research
    • Place of Presentation
      New Hampshire, USA
    • Year and Date
      2013-06-25
    • Related Report
      2013 Final Research Report
  • [Presentation] カルジオリピン-シトクロムc複合体形成の分子機構解明2013

    • Author(s)
      安部真人、中野正晶、小坂亜弓、三芳秀人
    • Organizer
      日本農芸化学会2013年度大会
    • Place of Presentation
      東北大学
    • Year and Date
      2013-03-26
    • Related Report
      2013 Final Research Report
  • [Presentation] カルジオリピン‐シトクロムc複合体形成の分子機構解明2013

    • Author(s)
      安部 真人、中野 正晶、小坂 亜弓、三芳 秀人
    • Organizer
      日本農芸化学会2013年度大会
    • Place of Presentation
      東北大学(仙台)
    • Related Report
      2012 Research-status Report
  • [Presentation] シトクロムc-カルジオリピン複合体形成によるペルオキシダーゼ活性誘導の分子機構2012

    • Author(s)
      安部真人、中野正晶、三芳秀人
    • Organizer
      第85会日本生化学会大会
    • Place of Presentation
      マリンメッセ福岡
    • Year and Date
      2012-12-14
    • Related Report
      2013 Final Research Report
  • [Presentation] Structural factors of cardiolipin required for induction of peroxidase activity of cytochrome c-cardiolipin complex2012

    • Author(s)
      Abe, M., Nakano, M., Miyoshi, H.
    • Organizer
      17^<th> European Bioenergetics Conference
    • Place of Presentation
      freiburg
    • Year and Date
      2012-09-17
    • Related Report
      2013 Final Research Report
  • [Presentation] シトクロムc-カルジオリピン複合体形成によるペルオキシダーゼ活性誘導の分子機構2012

    • Author(s)
      安部 真人、中野 正晶、三芳 秀人
    • Organizer
      第85回日本生化学会大会
    • Place of Presentation
      マリンメッセ福岡(福岡市)
    • Related Report
      2012 Research-status Report
  • [Presentation] Structural Factors of Cardiolipin Required for Induction of Peroxidase Activity of Cytochrome c―Cardiolipin Complex2012

    • Author(s)
      M. Abe, M. Nakano, H. Miyoshi
    • Organizer
      17th European Bioenergetics Conference 2012
    • Place of Presentation
      フライブルク大(ドイツ)
    • Related Report
      2012 Research-status Report
  • [Remarks]

    • URL

      http://www.biofunc-chem.kais.kyoto-u.ac.jp/

    • Related Report
      2013 Final Research Report
  • [Remarks] 京都大学大学院農学研究科応用生命科学専攻生物機能制御化学研究室

    • URL

      http://www.biofunc-chem.kais.kyoto-u.ac.jp/

    • Related Report
      2013 Annual Research Report
  • [Remarks] 京都大学大学院農学研究科応用生命科学専攻 生物機能制御化学研究室

    • URL

      http://www.biofunc-chem.kais.kyoto-u.ac.jp/

    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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