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Approach to identify genetic susceptibility to lung adenocarcinoma with EGFR mutation

Research Project

Project/Area Number 24790340
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Human genetics
Research InstitutionNational Center of Neurology and Psychiatry

Principal Investigator

SHIRAISHI Kouya  独立行政法人国立がん研究センター, 研究所, 研究員 (80609719)

Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2013: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2012: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords肺腺がん / 遺伝子多型 / 全ゲノム関連解析 / 肺腺がん感受性遺伝子の同定 / 国際研究者交流:アメリカ / 国際情報交換
Research Abstract

Advanced in genome research, it has become clear that the frequency of ADC with EGFR mutation was different between Asian and Caucasian. Therefore, genetic factors involved in susceptibility to ADC with EGFR mutation might be different by ethnicity or genetic background. To identify new susceptibility loci in ADC with EGFR mutation, we performed a genome-wide association study of ADC with EGFR mutation consisted of 663 cases from National cancer center hospital and 4,365 controls from Bio-bank Japan. In the GWAS, previously reported loci with ADC risk (TERT, TP63, BPTF and BTNL2) were also associated with risk for ADC with EGFR mutation. We detected EGFR mutation in DNA samples extracted from lung cancer tissues using HRMA. Further studies of putative susceptibility loci in several replication sets will need to identify new susceptibility to ADC with EGFR mutation.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (9 results)

All 2013 2012 Other

All Journal Article (2 results) (of which Peer Reviewed: 2 results) Presentation (6 results) (of which Invited: 1 results) Remarks (1 results)

  • [Journal Article] Regulatory nexus of synthesis and degradation deciphers cellular Nrf2 expression levels.2013

    • Author(s)
      Suzuki T, Shibata T, Takaya K, Shiraishi K, Kohno T, Kunitoh H, Tsuta K, Furuta K, Goto K, Hosoda F, Sakamoto H, Motohashi H and Yamamoto M.
    • Journal Title

      Mol Cell Biol

      Volume: 33 Issue: 12 Pages: 2402-2412

    • DOI

      10.1128/mcb.00065-13

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] A genome-wide association study identifies two new susceptibility loci for lung adenocarcinoma in the Japanese population2012

    • Author(s)
      Shiraishi K, Kunitoh H, Daigo Y, Takahashi A, Goto K, Sakamoto H, Ohnami S, Shimada Y, Ashikawa K, Saito A, Watanabe S, Tsuta K, Kamatani N, Yoshida T, Nakamura Y, Yokota J, Kubo M, Kohno T
    • Journal Title

      Nature Genetics

      Volume: 44 Issue: 8 Pages: 900-903

    • DOI

      10.1038/ng.2353

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Presentation] Genetic factors related with lung adenocarcinoma2013

    • Author(s)
      Shiraishi K, Kunitoh H, Daigo Y, Takahashi A, Goto K, Sakamoto H, Ohnami S, Shimada Y, Ashikawa K, Saito A, Watanabe S, Tsuta K, Kamatani N, Yoshida T, Nakamura Y, Yokota J, Kubo M, Kohno T
    • Organizer
      日本癌学会
    • Place of Presentation
      横浜
    • Related Report
      2013 Final Research Report
  • [Presentation] Genetic factors related with lung adenocarcinoma2013

    • Author(s)
      Kouya Shiraishi, Hideo Kunitoh, Yataro Daigo, Atsushi Takahashi, Koichi Goto, Hiromi Sakamoto, Sumiko Ohnami, Yoko Shimada, Kyota Ashikawa, Akira Saito, Shun-ichi Watanabe, Koji Tsuta, Naoyuki Kamatani, Teruhiko Yoshida, Yusuke Nakamura, Jun Yokota, Michiaki Kubo , Takashi Kohno
    • Organizer
      日本癌学会
    • Place of Presentation
      横浜・パシフィコ横浜
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] A genome - wide association study identifies two new susceptibility loci for lung adenocarcinoma in the Japanese population2012

    • Author(s)
      Shiraishi K, Kunitoh H, Daigo Y, Takahashi A, Goto K, Sakamoto H, Ohnami S, Shimada Y, Ashikawa K, Saito A, Watanabe S, Tsuta K, Kamatani N, Yoshida T, Nakamura Y, Yokota J, Kubo M, Kohno T
    • Organizer
      An AACR Special Conference on Post - GWAS horizons in molecular epidemiology
    • Place of Presentation
      Hollywood, FL, USA
    • Related Report
      2013 Final Research Report
  • [Presentation] A genome- wide association study identifies two new susceptibility loci for lung adenocarcinoma in the Japanese population2012

    • Author(s)
      Shiraishi K, Kunitoh H, Daigo Y, Goto K, Sakamoto H, Yoshida T, Nakamura Y, Yokota J, Kohno T
    • Organizer
      日本癌学会
    • Place of Presentation
      札幌
    • Related Report
      2013 Final Research Report
  • [Presentation] A genome-wide association study identifies two new susceptibility loci for lung adenocarcinoma in the Japanese population2012

    • Author(s)
      Kouya Shiraishi, Hideo Kunitoh Yataro Daigo, Atsushi Takahashi, Koichi Goto, Hiromi Sakamoto, ..., Teruhiko Yoshida, Yusuke Nakamura, Jun Yokota, Michiaki Kubo, Takashi Kohno.
    • Organizer
      An AACR Special Conference on Post-GWAS horizons in molecular epidemiology
    • Place of Presentation
      Hollywood, FL, USA
    • Related Report
      2012 Research-status Report
  • [Presentation] A genome-wide association study identifies two new susceptibility loci for lung adenocarcinoma in the Japanese population2012

    • Author(s)
      Kouya Shiraishi, Hideo Kunitoh, Yataro Daigo, Koichi Goto, Hiromi Sakamoto, Teruhiko Yoshida, Yusuke Nakamura, Jun Yokota, Takashi Kohno.
    • Organizer
      日本がん学会
    • Place of Presentation
      札幌
    • Related Report
      2012 Research-status Report
  • [Remarks] 独立行政法人国立がん研究センター研究所 ゲノム生物学研究分野ホームページ

    • URL

      http://www.ncc.go.jp/jp/nccri/divisions/genome_biology/

    • Related Report
      2013 Final Research Report

URL: 

Published: 2013-05-31   Modified: 2019-07-29  

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