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Application of high-speed and high-precision denoising techniques with GPGPU for brain imaging

Research Project

Project/Area Number 24791296
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Radiation science
Research InstitutionKyoto University

Principal Investigator

OISHI Naoya  京都大学, 医学(系)研究科(研究院), 助教 (40526878)

Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2014: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2013: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2012: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords脳画像 / ノイズ除去 / GPGPU / MRI / PET / 脳 / non-local means
Outline of Final Research Achievements

A non-local means (NLM) filter has been proposed, which can effectively remove noise with preserving edge in return for computational burden. We have therefore developed an accelerating software of the 3D NLM filter by general-purpose graphics processing units (GPGPU), which enables massively parallel computing. In the study, we applied the software to human and animal brain MRI and demonstrated that it is useful not only for basic but also clinical researches.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (34 results)

All 2015 2014 2013 2012

All Journal Article (15 results) (of which Peer Reviewed: 13 results,  Open Access: 4 results) Presentation (17 results) (of which Invited: 3 results) Book (2 results)

  • [Journal Article] The Uncinate Fasciculus as a Predictor of Conversion from aMCI to Alzheimer Disease2015

    • Author(s)
      Hiyoshi-Taniguchi K, Oishi N, Namiki C, Miyata J, Murai T, Cichocki A, Fukuyama H
    • Journal Title

      J Neuroimaging

      Volume: in press Issue: 5 Pages: 748-753

    • DOI

      10.1111/jon.12196

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Functional relevance of the precuneus in verbal politeness.2015

    • Author(s)
      Ashizuka A, Mima T, Sawamoto N, Aso T, Oishi N, Sugihara G, Kawada R, Takahashi H, Murai T, Fukuyama H.
    • Journal Title

      Neurosci Res.

      Volume: 91 Pages: 48-56

    • DOI

      10.1016/j.neures.2014.10.009

    • NAID

      120005593691

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Freezing of gait and white matter changes: a tract-based spatial statistics study2015

    • Author(s)
      Iseki K, Fukuyama H, Oishi N, Tomimoto H, Otsuka Y, Nankaku M, Benninger D, Hallett M, Hanakawa T
    • Journal Title

      J Clin Mov Disord

      Volume: in press Issue: 1 Pages: 1-9

    • DOI

      10.1186/s40734-014-0011-2

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Hypothalamic-Amygdalar-Brainstem Volume Reduction in a Patient with Narcolepsy Secondary to Diffuse Axonal Injury2015

    • Author(s)
      Walid Y, Sugihara G, Oishi N, Kubota M, Ubukata S, Murai T, Ueda K
    • Journal Title

      J Clin Sleep Med

      Volume: in press

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Relation between Healthy Factors and the Adolescent Impulsiveness Scale (AIS) among Junior and Senior High School Students2014

    • Author(s)
      Moriguchi Y., Murai T., Oishi N., Fukuyama H
    • Journal Title

      The Asian Journal of Child Care

      Volume: 5 Pages: 35-39

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Simultaneous Measurement of Local Brain Temperature and Cerebral Blood Flow Change in Rats for Quantitative Functional Brain Imaging2014

    • Author(s)
      Suzuki T, Oishi N, Fukuyama H
    • Journal Title

      Proceedings of the 2014 IEEE International Conference on Complex Medical Engineering

      Volume: 1 Pages: 214-219

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Nicotinic acetylcholine receptor density in cognitively intact subjects at an early stage of Parkinson's disease2014

    • Author(s)
      Isaias I, Spiegel J, Brumberg J, Cosgrove KP, Marotta G, Oishi N, Higuchi T, Kusters S, Schiller M, Dillmann U, Van Dyck C, Buck A, Herrmann K, Schloegl S, Volkmann J, Lassmann M, Fassbender K, Lorenz R, Samnick S
    • Journal Title

      Front. Aging Neurosci.

      Volume: 6 Pages: 160-160

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Voxel-based clustered imaging by multiparameter diffusion tensor images for glioma grading2014

    • Author(s)
      Inano Rika, Oishi Naoya, Kunieda Takeharu, Arakawa Yoshiki, Yamao Yukihiro, Shibata Sumiya, Kikuchi Takayuki, Fukuyama Hidenao, Miyamoto Susumu
    • Journal Title

      NeuroImage: Clinical

      Volume: 5 Pages: 396-407

    • DOI

      10.1016/j.nicl.2014.08.001

    • NAID

      120005477685

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Silent Information Regulator 2 Homolog 1 Counters Cerebral Hypoperfusion Injury by Deacetylating Endothelial Nitric Oxide Synthase2014

    • Author(s)
      Hattori Y, Okamoto Y, Maki T, Yamamoto Y, Oishi N, Yamahara K, Nagatsuka K, Takahashi R, Kalaria RN, Fukuyama H, Kinoshita M, Ihara M
    • Journal Title

      Stroke

      Volume: 45 Issue: 11 Pages: 3403-3411

    • DOI

      10.1161/strokeaha.114.006265

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] アルツハイマー型認知症の評価-C-11 PiB PETなどによるアミロイドイメージング2014

    • Author(s)
      大石直也、福山秀直
    • Journal Title

      INNERVISION

      Volume: 29 Pages: 100-102

    • Related Report
      2014 Annual Research Report
  • [Journal Article] Relation between Healthy Factors and the Adolescent Impulsiveness Scale (AIS) among Junior and Senior High School Students2014

    • Author(s)
      Moriguchi Y, Murai T, Oishi N, Fukuyama H
    • Journal Title

      The Asian Journal of Child Care

      Volume: in press

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] A comparison of three brain atlases for MCI prediction.2013

    • Author(s)
      Ota K, Oishi N, Ito K, Fukuyama H.
    • Journal Title

      J Neurosci Methods.

      Volume: 221 Pages: 139-150

    • DOI

      10.1016/j.jneumeth.2013.10.003

    • Related Report
      2014 Annual Research Report 2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Temporal Lobe Epilepsy with Amygdala Enlargement: A Morphologic and Functional Study.2012

    • Author(s)
      Takaya S, Ikeda A, Mitsueda-Ono T, Matsumoto R, Inouchi M, Namiki C, Oishi N, Mikuni N, Ishizu K, Takahashi R, Fukuyama H
    • Journal Title

      Journal of Neuroimaging

      Volume: 24 Issue: 1 Pages: 54-62

    • DOI

      10.1111/j.1552-6569.2011.00694.x

    • Related Report
      2014 Annual Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] A Challenge to Diffuse Optical Tomography using the Radiative Transport Equation2012

    • Author(s)
      Oishi N, Fukuyama H
    • Journal Title

      Proceedings of the 2012 IEEE International Conference oD Complex Medical Engineering

      Volume: 1 Pages: 261-266

    • DOI

      10.1109/iccme.2012.6275595

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] 認知症診断におけるマルチモーダルアプローチ①MRIのVBM2012

    • Author(s)
      大石直也
    • Journal Title

      Cognition and Dementia

      Volume: 11 Pages: 99-105

    • Related Report
      2012 Research-status Report
  • [Presentation] MCIからADへの移行予測向上を目指して-灰白質・白質構造変化を用いた検討-2014

    • Author(s)
      大石直也、並木千尋、福山秀直
    • Organizer
      第33回日本認知症学会学術集会
    • Place of Presentation
      横浜
    • Year and Date
      2014-11-29 – 2014-12-01
    • Related Report
      2014 Annual Research Report
  • [Presentation] ラット脳のVoxel-based MorphometryにおけるNon-local Meansノイズ除去フィルタの効果2014

    • Author(s)
      大石直也、吉井崇喜、福山秀直
    • Organizer
      第37回日本神経科学大会
    • Place of Presentation
      横浜
    • Year and Date
      2014-09-11 – 2014-09-13
    • Related Report
      2014 Annual Research Report
  • [Presentation] Structural MRI for early diagnosis of dementia2014

    • Author(s)
      Naoya Oishi
    • Organizer
      International Conference on Complex Medical Engineering 2014
    • Place of Presentation
      Taipei, Taiwan
    • Year and Date
      2014-06-26 – 2014-06-29
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 自己組織化マップと局所脳血流に基づく脳梗塞の層別化と認知機能の関連2014

    • Author(s)
      大石直也、中奥由里子、長谷佳樹、猪原匡史、福山秀直
    • Organizer
      第55回日本神経学会総会
    • Place of Presentation
      博多
    • Year and Date
      2014-05-21 – 2014-05-24
    • Related Report
      2014 Annual Research Report
  • [Presentation] 自己組織化マップと局所脳血流に基づく脳梗塞の層別化と認知機能の関連2014

    • Author(s)
      大石直也、中奥由里子、長谷佳樹、猪原匡史、福山秀直
    • Organizer
      第16回日本ヒト脳機能マッピング学会
    • Place of Presentation
      仙台
    • Related Report
      2013 Research-status Report
  • [Presentation] MCIにおける脳糖代謝分布パターンの多様性とADへの移行予測に関する検討2013

    • Author(s)
      大石直也、伊藤健吾、福山秀直
    • Organizer
      第54回日本神経学会総会
    • Place of Presentation
      東京
    • Related Report
      2013 Research-status Report
  • [Presentation] 自己組織化マップと局所脳血流に基づく脳梗塞の層別化と認知機能の関連2013

    • Author(s)
      大石直也、中奥由里子、長谷佳樹、猪原匡史、福山秀直
    • Organizer
      第18回認知神経科学会学術集会
    • Place of Presentation
      東京
    • Related Report
      2013 Research-status Report
  • [Presentation] MCI脳糖代謝分布パターンの多様性解析とADへの移行予測2013

    • Author(s)
      大石直也、伊藤健吾、福山秀直
    • Organizer
      第32回日本認知症学会学術集会
    • Place of Presentation
      松本
    • Related Report
      2013 Research-status Report
  • [Presentation] Predicting Alzheimer’s disease using a voxel-based approach: A comparison of three different atlases2013

    • Author(s)
      Kenichi Ota, Naoya Oishi, Kengo Ito, Hidenao Fukuyama
    • Organizer
      Organization for Human Brain Mapping 2013
    • Place of Presentation
      Seattle, USA
    • Related Report
      2013 Research-status Report
  • [Presentation] Numerical Computations of Stationary Radiative Transport Equation with Optical Properties of Human Brains2013

    • Author(s)
      Hiroshi Fujiwara, Naoya Oishi
    • Organizer
      The 9th East Asia SIAM Conference & The 2nd Conference on Industrial and Applied Mathematics (EASIAM-CIAM) 2013
    • Place of Presentation
      Bandung, Indonesia
    • Related Report
      2013 Research-status Report
  • [Presentation] A Novel Rat Model of Subcortical Ischemic Vascular Dementia with Ameroid Constrictor2013

    • Author(s)
      Kitamura A, Oishi N, Kalaria RN, Ito H, Tomimoto H, Fukuyama H, Takahashi R, Ihara M
    • Organizer
      The 6th Congress of The International Society for Vascular Behavioral and Cognitive Disorders
    • Place of Presentation
      Tronto, Canada
    • Related Report
      2013 Research-status Report
  • [Presentation] Montreal Cognitive Assessment Score Correlates with Regional Cerebral Blood Flow in Post-stroke Patients2013

    • Author(s)
      Yuriko Nakaoku, Yoshiki Hase, Naoya Oishi, Tatsuo Manabe, Mai Hagiwara, Takahiro Mitsueda, Masaru Matsui, Kazuyuki Nagatsuka, Hidenao Fukuyama, Masafumi Ihara
    • Organizer
      The 6th Congress of The International Society for Vascular Behavioral and Cognitive Disorders
    • Place of Presentation
      Tronto, Canada
    • Related Report
      2013 Research-status Report
  • [Presentation] Montreal Cognitive Assessment Score Correlates with Regional Cerebral Blood Flow in Post-stroke Patients2013

    • Author(s)
      Yuriko Nakaoku, Yoshiki Hase, Naoya Oishi, Tatsuo Manabe, Mai Hagiwara, Takahiro Mitsueda, Masaru Matsui, Kazuyuki Nagatsuka, Hidenao Fukuyama, Masafumi Ihara
    • Organizer
      The 6th Korea-Japan Joint Stroke Conference
    • Place of Presentation
      Osaka, Japan
    • Related Report
      2013 Research-status Report
  • [Presentation] GPGPU for Medical Imaging2012

    • Author(s)
      Naoya Oishi
    • Organizer
      Workshop on GPGPU/High-Accurate Computation 2012
    • Place of Presentation
      Arima, Japan
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] 『PET/SPECTによる中枢系変性疾患の診断』~ 脳血流・糖代謝イメージング ~2012

    • Author(s)
      大石直也
    • Organizer
      第28 回BFIC
    • Place of Presentation
      神戸
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] 自己組織化マップによる脳糖代謝分布パターン可視化の有用性-MCI患者での検討-2012

    • Author(s)
      大石直也、石津浩一、並木千尋、福山秀直
    • Organizer
      第53回日本神経学会総会
    • Place of Presentation
      東京
    • Related Report
      2012 Research-status Report
  • [Presentation] 自己組織化マップに基づくMCI患者の脳糖代謝分布パターンの分類2012

    • Author(s)
      大石直也、石津浩一、並木千尋、福山秀直
    • Organizer
      第31回日本認知症学会学術集会
    • Place of Presentation
      筑波
    • Related Report
      2012 Research-status Report
  • [Book] 認知症と画像診断(総論).脳とこころのプライマリケア2知能の衰え2013

    • Author(s)
      大石直也、福山秀直
    • Publisher
      シナジー
    • Related Report
      2013 Research-status Report
  • [Book] Movement Disordersの画像所見.アクチュアル脳・神経疾患の臨床・パーキンソン病と運動異常2013

    • Author(s)
      大石直也、福山秀直
    • Publisher
      中山書店
    • Related Report
      2013 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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