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Developing methodologies for developmental genetics of an appendicularian, Oikopleura dioica.

Research Project

Project/Area Number 24870019
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Developmental biology
Research InstitutionOsaka University

Principal Investigator

ONUMA Takeshi  大阪大学, 理学(系)研究科(研究院), 助教 (30632103)

Project Period (FY) 2012-08-31 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
Fiscal Year 2013: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2012: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywordsオタマボヤ / トランスポゾン / 遺伝子導入 / RNA seq / 近交系 / 発生遺伝学 / トランスジェニック / 遺伝子発現 / 発生 / ヌクレアーゼ
Research Abstract

A planktonic tunicate, Oikopleura dioica, is a candidate model organism to understand mechanisms of chordate development. It has the short life cycle of only five days and consists of small number of cells. In this study, I aimed to establish molecular and genetic approaches using this simple chordate. First, I tried transposon-mediated transgenesis of O. dioica. My analyses identified three transposons of which exogenous transposase mRNAs are translated to proteins and localize to the nucleus of early embryos. Second, I cloned several cDNAs from Japanese O. dioica. They include testis-specific histones and homologues of proteins that regulate cell polarizing and axis formation in other model organisms. Furthermore, to characterize all mRNA transcripts in unfertilized eggs and larvae, RNA seq analysis was performed. Third, inbreeding over 10 generations was carried out to establish inbred line.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • Research Products

    (22 results)

All 2013 2012 Other

All Journal Article (7 results) (of which Peer Reviewed: 5 results) Presentation (14 results) (of which Invited: 3 results) Remarks (1 results)

  • [Journal Article] RNA interference in the appendicularian, Oikopleura dioica, reveals the function of the Brachyury gene2013

    • Author(s)
      Omotezako T, Nishino A, Onuma TA and Nishida H
    • Journal Title

      Development Genes and Evolution

      Volume: 223(4) Pages: 261-267

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] ゼブラフィッシュにおけるKiss1受容体の重複遺伝子が示す「発現とリガンド選択性の多様性」および「転写促進活性をもつ核局在バリアントの存在」2013

    • Author(s)
      小沼健
    • Journal Title

      比較内分泌学

      Volume: 148 Pages: 48-51

    • NAID

      130004952312

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
  • [Journal Article] RNA interference in the appendicularian Oikopleura dioica reveals the function of the Brachyury gene.2013

    • Author(s)
      Omotezako, T., Nishino, A., Onuma T. A., and Nishida, H.
    • Journal Title

      Dev. Genes Evol.

      Volume: 223 Issue: 4 Pages: 261-267

    • DOI

      10.1007/s00427-013-0438-8

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] ゼブラフィッシュのKiss1受容体の重複遺伝子が示す「発現とリガンド選択性の多様性」および「転写促進活性をもつ核局在バリアントの存在」2013

    • Author(s)
      小沼健
    • Journal Title

      比較内分泌学

      Volume: 148 Pages: 48-51

    • Related Report
      2013 Annual Research Report
  • [Journal Article] RNA interference in the appendicularian, Oikopleura dioica, reveals the function of the Brachyury gene.2013

    • Author(s)
      Omotezako T, Nishino A, Onuma TA, Nishida H (Omotezako T)
    • Journal Title

      Development Genes and Evolution

      Volume: in press

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Duplicated Kiss1 receptor genes in zebrafish : Distinct gene expression patterns, different ligand selectivity, and a novel nuclear isoform with transactivating activity2012

    • Author(s)
      Onuma TA and Duan C
    • Journal Title

      The FASEB Journal

      Volume: 26 Pages: 2941-2950

    • NAID

      130004952312

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Duplicated Kiss1 receptor genes in zebrafish: Distinct gene expression patterns, different ligand selectivity, and a novel nuclear isoform with transactivating activity.2012

    • Author(s)
      Onuma TA, Duan C (Onuma TA)
    • Journal Title

      The FASEB Journal

      Volume: 26 Issue: 7 Pages: 2941-2950

    • DOI

      10.1096/fj.11-201095

    • NAID

      130004952312

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] ワカレオタマボヤにおける遺伝子導入の取り組み2013

    • Author(s)
      小沼健,岸香苗,表迫竜也,西田宏記
    • Organizer
      第3回Just do it!!の会, 2013
    • Place of Presentation
      島根,さんぴーの出雲(口頭発表)
    • Year and Date
      2013-05-27
    • Related Report
      2013 Final Research Report
  • [Presentation] A new chordate model animal with short life cycle of five days : The Appendicularian, Oikopleura dioica2013

    • Author(s)
      Nishida H, Nishio T, Onuma T, Omotezako T, Kishi K
    • Organizer
      Korean Society for Biochemistry and Molecular Biology
    • Place of Presentation
      Seoul, COEX(oral presentation)
    • Related Report
      2013 Final Research Report
  • [Presentation] Long-distance cell migrations during larval development in an appendicularian, Oikopleura dioica2013

    • Author(s)
      岸香苗,小沼健,西田宏記
    • Organizer
      第46回日本発生生物学会
    • Place of Presentation
      松江,くにびきメッセ(口頭・ポスター発表)(P-169)
    • Related Report
      2013 Final Research Report
  • [Presentation] Long-distance cell migrations during larval development in the appendicularian, Oikopleura dioica2013

    • Author(s)
      Kishi K, Onuma TA, Nishida H
    • Organizer
      17th International Congress of Developmental Biology, poster presentation
    • Place of Presentation
      Cancun, Cancun Center(Abstract No. OR12-2)
    • Related Report
      2013 Final Research Report
  • [Presentation] RNA interference method in appendicularian2013

    • Author(s)
      Omotezako T, Nishino A, Onuma TA, Nishida H
    • Organizer
      The 7th International Tunicate Meeting
    • Place of Presentation
      Naples, the Università degli Studi di Napoli "Parthenope"
    • Related Report
      2013 Final Research Report
  • [Presentation] A new model organism in developmental genetics : The appendicularian, Oikopleura dioica. (発生遺伝学の新しいモデル生物、ワカレオタマボヤの紹介と研究の現状)2013

    • Author(s)
      Onuma TA, Kishi K, Omotezako T, Nishida H
    • Organizer
      The 3^<rd> Annual Meeting of Whole-Organism Science Society Joint meeting with The 12^<th> Annual Meeting of Structural-Biological Whole Cell Project
    • Place of Presentation
      大阪、大阪大学工学部シグマホール
    • Related Report
      2013 Final Research Report
  • [Presentation] ワカレオタマボヤ幼生期の蛍光ライブイメージング2013

    • Author(s)
      岸香苗,小沼健,西田宏記
    • Organizer
      第84回日本動物学会、ホヤ談話会
    • Place of Presentation
      岡山、岡山大学津島キャンパス
    • Related Report
      2013 Final Research Report
  • [Presentation] Long-distance cell migrations during larval development in the appendicularian, Oikopleura dioica.2013

    • Author(s)
      Kishi K, Onuma TA, Nishida H.
    • Organizer
      17th International Congress of Developmental Biology
    • Place of Presentation
      Cancun
    • Related Report
      2013 Annual Research Report 2012 Annual Research Report
    • Invited
  • [Presentation] A new chordate model animal with short life cycle of five days: The Appendicularian, Oikopleura dioica.2013

    • Author(s)
      Nishida H, Nishio T, Onuma T, Omotezako T, Kishi K.
    • Organizer
      Korean Society for Biochemistry and Molecular Biology
    • Place of Presentation
      Seoul
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Long-distance cell migrations during larval development in an appendicularian, Oikopleura dioica.2013

    • Author(s)
      岸香苗, 小沼健, 西田宏記.
    • Organizer
      第46回日本発生生物学会
    • Place of Presentation
      松江
    • Related Report
      2013 Annual Research Report 2012 Annual Research Report
  • [Presentation] ワカレオタマボヤにおける遺伝子導入の取り組み.2013

    • Author(s)
      小沼健, 岸香苗, 表迫竜也, 西田宏記.
    • Organizer
      第3回 Just do it!!の会
    • Place of Presentation
      出雲
    • Related Report
      2013 Annual Research Report
  • [Presentation] A new model organism in developmental genetics: The appendicularian, Oikopleura dioica. (発生遺伝学の新しいモデル生物、ワカレオタマボヤの紹介と研究の現状)2013

    • Author(s)
      Onuma TA, Kishi K, Omotezako T, Nishida H.
    • Organizer
      The 3rd Annual Meeting of Whole-Organism Science Society Joint meeting with The 12th Annual Meeting of Structural-Biological Whole Cell Project.
    • Place of Presentation
      大阪
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] ワカレオタマボヤ幼生期の蛍光ライブイメージング2013

    • Author(s)
      岸香苗, 小沼健, 西田宏記.
    • Organizer
      日本動物学会第84回大会 ホヤ談話会
    • Place of Presentation
      岡山
    • Related Report
      2013 Annual Research Report
  • [Presentation] ワカレオタマボヤの発生遺伝学研究の現状2012

    • Author(s)
      岸香苗,表迫竜也,西野敦雄,小沼健(西田宏記研究室オタマボヤグループ)
    • Organizer
      ホヤ研究会
    • Place of Presentation
      京都,京都大学(口頭発表)(要旨集pp30)
    • Related Report
      2013 Final Research Report
  • [Remarks] 大阪大学研究者総欄内

    • URL

      http://www.dma.jim.osaka-u.ac.jp/view?l=ja&u=10000266&f1=12&sm=field&sl=ja&sp=1

    • Related Report
      2013 Final Research Report

URL: 

Published: 2012-11-27   Modified: 2019-07-29  

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