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Structural studies on mechanism of amino acid exporting system in Corynebacterium glutamicum

Research Project

Project/Area Number 24880011
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Applied microbiology
Research InstitutionThe University of Tokyo

Principal Investigator

YOSHIDA Ayako  東京大学, 生物生産工学研究センター, 特任助教 (90633686)

Project Period (FY) 2012-08-31 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
Fiscal Year 2013: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2012: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywordsメカノセンシティブチャネル / グルタミン酸発酵 / コリネバクテリウム グルタミカム / 膜タンパク質 / X線結晶構造解析 / グルタミン酸醗酵 / コリネバクテリウム / 応用微生物学 / アミノ酸発酵 / タンパク質X線結晶構造解析
Research Abstract

Corynebacterium glutamicum is a bacterium for glutamate fermentation. Recently, the mechanosensitive channel, NCgl1221 is uncovered to be responsible for the export of glutamate and is important for the glutamate fermentation. To elucidate the mechanism of glutamate exporting system in C. glutamicum structurally, we performed the crystallographic analysis of NCgl1221
We constructed the expression system of NCgl1221 in Escherichia coli and we could successfully obtain purified NCgl1221. After crystallization screening, protein crystals appeared in several conditions. Although the resolution was poore, we could observe the good diffraction patterns from the crystals obtained in the optimized crystallization condition.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • Research Products

    (12 results)

All 2014 2013 2012 Other

All Journal Article (2 results) (of which Peer Reviewed: 2 results) Presentation (8 results) Remarks (2 results)

  • [Journal Article] Taking Control over Control: Use of Product Sensing in Single Cells to Remove Flux Control at Key Enzymes in Biosynthesis Pathways2014

    • Author(s)
      Georg Schendzielorz, Martin Dippong, Alexander Gruenberger, Dietrich Kohlheyer, Ayako Yoshida, Stephan Binder, Chiharu Nishiyama, Makoto Nishiyama, Michael Bott, and Lothar Eggeling
    • Journal Title

      ACS SyntheticBiology

      Volume: 3 Issue: 1 Pages: 21-29

    • DOI

      10.1021/sb400059y

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus.2013

    • Author(s)
      Ouchi T, Fujimura T, et al.
    • Journal Title

      Nat Chem Biol.

      Volume: 9(4):277-83 Issue: 4 Pages: 277-283

    • DOI

      10.1038/nchembio.1200

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] Structural studies on lysine biosynthesis using a novel carrier protein LysW2014

    • Author(s)
      Ayako Yoshida, Takeo Tomita, Saori Kosono, Tomohisa Kuzuyama, and Makoto Nishiyama
    • Organizer
      US-Japan Seminar on the Biosynthesis of Natural Products for Young Researchers
    • Place of Presentation
      東京工業大学大岡山キャンパス
    • Related Report
      2013 Annual Research Report
  • [Presentation] 高度好熱菌Thermus thermophilusにおける短鎖アシル化修飾による酵素調節機構の解析2014

    • Author(s)
      吉田彩子、山本寛之、西山真、吉田稔、古園さおり
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      明治大学生田キャンパス
    • Related Report
      2013 Annual Research Report
  • [Presentation] N-modificating protein LysW functions as a carrier protein in lysine biosynthesis in T. thermophilus2013

    • Author(s)
      Ayako Yoshida, Takeo Tomita, Saori Kosono, Tomohisa Kuzuyama, Makoto Nishiyama
    • Organizer
      17th German-Japanese Workshop on Enzyme Technology
    • Place of Presentation
      Technical University of Hamburg-Harburg(ハンブルク、ドイツ)
    • Related Report
      2013 Annual Research Report
  • [Presentation] N-modificating protein LysW functions as a carrier protein in lysine biosynthesis in T. thermophilus2013

    • Author(s)
      Ayako Yoshida, Takeo Tomita, Saori Kosono, Tomohisa Kuzuyama, and Makoto Nishiyama
    • Organizer
      International Conference on Structural Genomics 2013
    • Place of Presentation
      京王プラザホテル札幌(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Lysine and arginine biosynthesis in Thermococcus kodakarensis2013

    • Author(s)
      Ayako Yoshida, Takeo Tomita, Haruyuki Atomi, Saori Kosono, Tomohisa Kuzuyama, Makoto Nishiyama
    • Organizer
      Enzyme Engineering XXII
    • Place of Presentation
      富山国際会議場(富山市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Functional analysis of lysine and arginine biosynthetic pathways in Thermococcus kodakarensis2012

    • Author(s)
      Ayako Yoshida, Takeo Tomita, Haruyuki Atomi, Tomohisa Kuzuyama, Makoto Nishiyama
    • Organizer
      13th Swiss Japanese Conference on Biotechnology and Bioprocess Engineering
    • Place of Presentation
      Walzenhausen, Swizerland
    • Related Report
      2012 Annual Research Report
  • [Presentation] Thermococcus kodakarensisのリジン・アルギニン生合成酵素の基質認識機構の解明

    • Author(s)
      吉田 彩子、富田 武郎、跡見 晴幸、古園 さおり、 葛山 智久、西山 真
    • Organizer
      日本農芸化学会2013年度大会
    • Place of Presentation
      東北大学(仙台)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Function and evolution of β-decarboxylating dehydrogenase family

    • Author(s)
      Lulu Yin, Ayako Yoshida, Takeo Tomita, Hiromi Nishida, Hayuruki Atomi, Saori Kosono, Tomohisa Kuzuyama, Makoto Nishiyama
    • Organizer
      日本農芸化学会2013年度大会
    • Place of Presentation
      東北大学(仙台)
    • Related Report
      2012 Annual Research Report
  • [Remarks]

    • URL

      http://park.itc.u-tokyo.ac.jp/biotec-res-ctr/MBT/

    • Related Report
      2013 Final Research Report
  • [Remarks] 東京大学生物生産工学研究センター微生物機能代謝工学研究室

    • URL

      http://park.itc.u-tokyo.ac.jp/biotec-res-ctr/MBT/

    • Related Report
      2013 Annual Research Report

URL: 

Published: 2012-11-27   Modified: 2019-07-29  

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